EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSSMAG00000003106 (Gene tree)
Gene ID: -
Gene Symbol: klf5b
Alias: klf5
Full Name: Kruppel-like factor 5b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 20634 bases
Position: chr14:16692211-16712844
Accession: ZDB-GENE-080424-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000005074	zf-C2H2	PF00096.26	9.2e-15	1	3
ENSSMAP00000005074	zf-C2H2	PF00096.26	9.2e-15	2	3
ENSSMAP00000005074	zf-C2H2	PF00096.26	9.2e-15	3	3
ENSSMAP00000005040	zf-C2H2	PF00096.26	3.8e-14	1	3
ENSSMAP00000005040	zf-C2H2	PF00096.26	3.8e-14	2	3
ENSSMAP00000005040	zf-C2H2	PF00096.26	3.8e-14	3	3
ENSSMAP00000005054	zf-C2H2	PF00096.26	6.1e-14	1	3
ENSSMAP00000005054	zf-C2H2	PF00096.26	6.1e-14	2	3
ENSSMAP00000005054	zf-C2H2	PF00096.26	6.1e-14	3	3
ENSSMAP00000005054	zf-met	PF12874.7	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000005149	-	807	-	ENSSMAP00000005074	268 (aa)	-	-
ENSSMAT00000005129	-	4269	-	ENSSMAP00000005054	447 (aa)	-	-
ENSSMAT00000005116	-	3377	-	ENSSMAP00000005040	389 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000003106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000003106	klf5b	80	50.000	ENSSMAG00000021251	-	83	46.053
ENSSMAG00000003106	klf5b	69	46.053	ENSSMAG00000009115	-	76	50.000
ENSSMAG00000003106	klf5b	50	46.053	ENSSMAG00000015356	-	76	46.053
ENSSMAG00000003106	klf5b	50	39.604	ENSSMAG00000002391	ZNF319	66	39.604
ENSSMAG00000003106	klf5b	59	44.444	ENSSMAG00000015347	-	79	44.444
ENSSMAG00000003106	klf5b	69	43.421	ENSSMAG00000003594	-	76	43.421
ENSSMAG00000003106	klf5b	58	39.560	ENSSMAG00000014864	-	85	38.462