EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000003135 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: zgc:109966
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 19849 bases
Position: chr14:4542222-4562070
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000005122	KH_1	PF00013.29	2.2e-54	1	3
ENSSMAP00000005122	KH_1	PF00013.29	2.2e-54	2	3
ENSSMAP00000005122	KH_1	PF00013.29	2.2e-54	3	3
ENSSMAP00000005149	KH_1	PF00013.29	2.5e-54	1	3
ENSSMAP00000005149	KH_1	PF00013.29	2.5e-54	2	3
ENSSMAP00000005149	KH_1	PF00013.29	2.5e-54	3	3
ENSSMAP00000005143	KH_1	PF00013.29	1.7e-48	1	3
ENSSMAP00000005143	KH_1	PF00013.29	1.7e-48	2	3
ENSSMAP00000005143	KH_1	PF00013.29	1.7e-48	3	3
ENSSMAP00000005122	KH_2	PF07650.17	2.8e-14	1	1
ENSSMAP00000005149	KH_2	PF07650.17	3.7e-14	1	1
ENSSMAP00000005143	KH_2	PF07650.17	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000005224	-	1300	-	ENSSMAP00000005149	327 (aa)	-	-
ENSSMAT00000005218	-	957	-	ENSSMAP00000005143	318 (aa)	-	-
ENSSMAT00000005198	-	3936	-	ENSSMAP00000005122	321 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000003135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000003135	-	71	39.706	ENSSMAG00000004167	khsrp	59	39.706
ENSSMAG00000003135	-	97	78.302	ENSSMAG00000012889	PCBP2	97	78.302
ENSSMAG00000003135	-	95	76.052	ENSSMAG00000013541	zgc:110045	89	76.415
ENSSMAG00000003135	-	94	63.609	ENSSMAG00000009392	-	70	63.692
ENSSMAG00000003135	-	64	39.683	ENSSMAG00000017905	-	57	39.683
ENSSMAG00000003135	-	71	37.313	ENSSMAG00000012166	KHSRP	59	37.313
ENSSMAG00000003135	-	88	36.923	ENSSMAG00000003793	FUBP3	75	36.923
ENSSMAG00000003135	-	97	95.114	ENSSMAG00000011929	pcbp3	97	95.114
ENSSMAG00000003135	-	97	32.143	ENSSMAG00000014262	igf2bp3	61	32.143
ENSSMAG00000003135	-	93	33.544	ENSSMAG00000010576	igf2bp2b	66	33.544
ENSSMAG00000003135	-	77	51.429	ENSSMAG00000007969	hnrpkl	61	47.059
ENSSMAG00000003135	-	97	77.848	ENSSMAG00000005182	pcbp2	97	77.848
ENSSMAG00000003135	-	78	47.945	ENSSMAG00000019461	hnrnpk	53	48.571
ENSSMAG00000003135	-	94	62.918	ENSSMAG00000005827	pcbp4	65	62.997

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000003135	-	99	93.333	ENSAPOG00000020003	pcbp3	89	93.333	Acanthochromis_polyacanthus
ENSSMAG00000003135	-	100	99.083	ENSAPOG00000016582	-	100	99.083	Acanthochromis_polyacanthus
ENSSMAG00000003135	-	98	91.291	ENSAMEG00000001697	-	99	87.069	Ailuropoda_melanoleuca
ENSSMAG00000003135	-	100	96.000	ENSACIG00000002739	-	100	96.000	Amphilophus_citrinellus
ENSSMAG00000003135	-	100	87.714	ENSACIG00000010933	pcbp3	100	87.714	Amphilophus_citrinellus
ENSSMAG00000003135	-	97	96.774	ENSAOCG00000008592	-	100	94.953	Amphiprion_ocellaris
ENSSMAG00000003135	-	95	94.539	ENSAOCG00000007806	-	100	94.539	Amphiprion_ocellaris
ENSSMAG00000003135	-	100	97.806	ENSAPEG00000005209	-	100	97.806	Amphiprion_percula
ENSSMAG00000003135	-	100	90.057	ENSAPEG00000008011	pcbp3	100	90.057	Amphiprion_percula
ENSSMAG00000003135	-	100	98.428	ENSATEG00000009833	-	100	98.428	Anabas_testudineus
ENSSMAG00000003135	-	97	88.485	ENSATEG00000015787	-	100	88.485	Anabas_testudineus
ENSSMAG00000003135	-	98	75.204	ENSAPLG00000008951	-	82	75.204	Anas_platyrhynchos
ENSSMAG00000003135	-	98	92.988	ENSAPLG00000002975	-	98	92.988	Anas_platyrhynchos
ENSSMAG00000003135	-	98	83.680	ENSACAG00000009819	-	98	83.680	Anolis_carolinensis
ENSSMAG00000003135	-	98	85.714	ENSACAG00000004607	-	99	85.714	Anolis_carolinensis
ENSSMAG00000003135	-	95	96.218	ENSANAG00000030702	-	100	96.218	Aotus_nancymaae
ENSSMAG00000003135	-	100	98.471	ENSACLG00000003801	-	100	98.471	Astatotilapia_calliptera
ENSSMAG00000003135	-	100	89.205	ENSACLG00000011835	pcbp3	100	89.205	Astatotilapia_calliptera
ENSSMAG00000003135	-	100	91.714	ENSAMXG00000003440	pcbp3	100	91.714	Astyanax_mexicanus
ENSSMAG00000003135	-	95	68.807	ENSAMXG00000001760	zgc:110045	72	68.807	Astyanax_mexicanus
ENSSMAG00000003135	-	97	93.485	ENSAMXG00000013588	-	100	93.485	Astyanax_mexicanus
ENSSMAG00000003135	-	90	96.943	ENSCAFG00020019472	-	81	96.943	Canis_lupus_dingo
ENSSMAG00000003135	-	98	97.134	ENSCSAG00000007440	-	89	97.134	Chlorocebus_sabaeus
ENSSMAG00000003135	-	98	80.702	ENSCPBG00000000733	-	76	79.769	Chrysemys_picta_bellii
ENSSMAG00000003135	-	95	97.697	ENSCPBG00000012151	-	99	91.617	Chrysemys_picta_bellii
ENSSMAG00000003135	-	100	79.360	ENSCSEG00000016984	-	100	79.360	Cynoglossus_semilaevis
ENSSMAG00000003135	-	97	93.485	ENSCSEG00000000822	pcbp3	99	93.485	Cynoglossus_semilaevis
ENSSMAG00000003135	-	100	98.165	ENSCVAG00000005262	-	100	98.165	Cyprinodon_variegatus
ENSSMAG00000003135	-	100	89.773	ENSCVAG00000014482	pcbp3	100	89.773	Cyprinodon_variegatus
ENSSMAG00000003135	-	100	92.000	ENSDARG00000054378	pcbp3	100	92.000	Danio_rerio
ENSSMAG00000003135	-	98	83.121	ENSETEG00000015988	-	98	83.121	Echinops_telfairi
ENSSMAG00000003135	-	92	70.850	ENSEBUG00000005495	pcbp3	74	70.850	Eptatretus_burgeri
ENSSMAG00000003135	-	95	73.571	ENSEBUG00000016192	pcbp3	99	73.978	Eptatretus_burgeri
ENSSMAG00000003135	-	98	81.388	ENSEBUG00000007485	-	92	82.192	Eptatretus_burgeri
ENSSMAG00000003135	-	100	90.085	ENSELUG00000003521	pcbp3	100	90.085	Esox_lucius
ENSSMAG00000003135	-	100	97.859	ENSELUG00000001560	-	91	97.859	Esox_lucius
ENSSMAG00000003135	-	98	75.477	ENSFALG00000004411	-	77	75.477	Ficedula_albicollis
ENSSMAG00000003135	-	98	96.497	ENSFALG00000003949	-	98	96.497	Ficedula_albicollis
ENSSMAG00000003135	-	100	96.865	ENSFHEG00000006539	-	100	96.865	Fundulus_heteroclitus
ENSSMAG00000003135	-	98	93.610	ENSFHEG00000016615	pcbp3	96	94.516	Fundulus_heteroclitus
ENSSMAG00000003135	-	96	70.393	ENSGMOG00000008611	-	100	70.393	Gadus_morhua
ENSSMAG00000003135	-	97	80.597	ENSGMOG00000011992	pcbp3	97	80.597	Gadus_morhua
ENSSMAG00000003135	-	99	81.105	ENSGALG00000013155	-	99	81.459	Gallus_gallus
ENSSMAG00000003135	-	98	83.944	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSSMAG00000003135	-	100	98.471	ENSGAFG00000010274	-	100	98.471	Gambusia_affinis
ENSSMAG00000003135	-	100	85.044	ENSGAFG00000011430	pcbp3	99	85.044	Gambusia_affinis
ENSSMAG00000003135	-	100	79.121	ENSGACG00000014955	-	100	79.121	Gasterosteus_aculeatus
ENSSMAG00000003135	-	100	91.520	ENSGACG00000002266	-	100	91.520	Gasterosteus_aculeatus
ENSSMAG00000003135	-	77	90.270	ENSGAGG00000006956	-	76	90.270	Gopherus_agassizii
ENSSMAG00000003135	-	91	89.139	ENSGAGG00000000271	-	100	89.139	Gopherus_agassizii
ENSSMAG00000003135	-	97	93.871	ENSHBUG00000010697	pcbp3	98	93.871	Haplochromis_burtoni
ENSSMAG00000003135	-	100	98.471	ENSHBUG00000021782	-	100	98.471	Haplochromis_burtoni
ENSSMAG00000003135	-	100	92.835	ENSHCOG00000006067	-	100	92.835	Hippocampus_comes
ENSSMAG00000003135	-	100	90.028	ENSHCOG00000017868	pcbp3	100	90.028	Hippocampus_comes
ENSSMAG00000003135	-	100	95.912	ENSIPUG00000006238	pcbp3	100	95.912	Ictalurus_punctatus
ENSSMAG00000003135	-	100	97.859	ENSKMAG00000018530	-	100	97.859	Kryptolebias_marmoratus
ENSSMAG00000003135	-	100	90.057	ENSKMAG00000003046	pcbp3	100	90.057	Kryptolebias_marmoratus
ENSSMAG00000003135	-	100	83.591	ENSLBEG00000006542	-	100	83.591	Labrus_bergylta
ENSSMAG00000003135	-	99	93.651	ENSLBEG00000006201	pcbp3	98	93.651	Labrus_bergylta
ENSSMAG00000003135	-	95	83.714	ENSLACG00000010386	pcbp3	77	80.992	Latimeria_chalumnae
ENSSMAG00000003135	-	98	75.275	ENSLACG00000010804	zgc:110045	77	75.275	Latimeria_chalumnae
ENSSMAG00000003135	-	95	82.875	ENSLOCG00000005058	zgc:110045	80	83.180	Lepisosteus_oculatus
ENSSMAG00000003135	-	98	91.617	ENSLOCG00000009369	pcbp3	99	91.617	Lepisosteus_oculatus
ENSSMAG00000003135	-	97	94.788	ENSMAMG00000022336	pcbp3	93	94.788	Mastacembelus_armatus
ENSSMAG00000003135	-	100	97.170	ENSMAMG00000011620	-	100	97.170	Mastacembelus_armatus
ENSSMAG00000003135	-	100	87.429	ENSMZEG00005008993	pcbp3	100	87.429	Maylandia_zebra
ENSSMAG00000003135	-	100	88.757	ENSMZEG00005014882	-	100	89.349	Maylandia_zebra
ENSSMAG00000003135	-	97	76.667	ENSMGAG00000006794	-	79	74.400	Meleagris_gallopavo
ENSSMAG00000003135	-	94	81.449	ENSMGAG00000001883	-	96	81.268	Meleagris_gallopavo
ENSSMAG00000003135	-	100	96.541	ENSMMOG00000005216	-	100	96.541	Mola_mola
ENSSMAG00000003135	-	97	92.949	ENSMMOG00000000730	pcbp3	88	92.949	Mola_mola
ENSSMAG00000003135	-	67	77.570	ENSMODG00000027884	-	93	77.570	Monodelphis_domestica
ENSSMAG00000003135	-	100	87.749	ENSMALG00000000691	pcbp3	100	87.749	Monopterus_albus
ENSSMAG00000003135	-	98	85.801	ENSMPUG00000001779	-	90	85.801	Mustela_putorius_furo
ENSSMAG00000003135	-	100	89.349	ENSNBRG00000016714	-	100	89.349	Neolamprologus_brichardi
ENSSMAG00000003135	-	100	87.429	ENSNBRG00000016409	-	100	87.429	Neolamprologus_brichardi
ENSSMAG00000003135	-	94	82.749	ENSOPRG00000003431	-	99	82.749	Ochotona_princeps
ENSSMAG00000003135	-	97	84.419	ENSONIG00000012122	-	98	84.419	Oreochromis_niloticus
ENSSMAG00000003135	-	100	98.442	ENSONIG00000004611	-	100	98.442	Oreochromis_niloticus
ENSSMAG00000003135	-	98	96.178	ENSOCUG00000002696	-	89	96.178	Oryctolagus_cuniculus
ENSSMAG00000003135	-	97	96.774	ENSORLG00000000059	pcbp3	100	96.774	Oryzias_latipes
ENSSMAG00000003135	-	100	98.442	ENSORLG00000022739	-	100	98.442	Oryzias_latipes
ENSSMAG00000003135	-	100	98.131	ENSORLG00020006124	-	100	98.131	Oryzias_latipes_hni
ENSSMAG00000003135	-	99	95.298	ENSORLG00020012671	pcbp3	99	95.298	Oryzias_latipes_hni
ENSSMAG00000003135	-	99	95.298	ENSORLG00015000429	pcbp3	99	95.298	Oryzias_latipes_hsok
ENSSMAG00000003135	-	99	97.853	ENSORLG00015008051	-	99	97.853	Oryzias_latipes_hsok
ENSSMAG00000003135	-	95	94.138	ENSOMEG00000020811	pcbp3	99	94.138	Oryzias_melastigma
ENSSMAG00000003135	-	100	97.819	ENSOMEG00000020162	-	100	97.819	Oryzias_melastigma
ENSSMAG00000003135	-	98	83.611	ENSOGAG00000008044	-	99	83.611	Otolemur_garnettii
ENSSMAG00000003135	-	100	97.554	ENSPKIG00000019329	pcbp3	100	97.554	Paramormyrops_kingsleyae
ENSSMAG00000003135	-	78	85.561	ENSPKIG00000020913	-	82	85.561	Paramormyrops_kingsleyae
ENSSMAG00000003135	-	98	83.686	ENSPSIG00000014970	-	98	84.290	Pelodiscus_sinensis
ENSSMAG00000003135	-	91	80.894	ENSPSIG00000008350	-	72	77.395	Pelodiscus_sinensis
ENSSMAG00000003135	-	100	90.000	ENSPMGG00000022383	pcbp3	100	90.000	Periophthalmus_magnuspinnatus
ENSSMAG00000003135	-	78	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSSMAG00000003135	-	98	73.899	ENSPMAG00000004551	pcbp3	91	73.899	Petromyzon_marinus
ENSSMAG00000003135	-	98	90.504	ENSPCIG00000028092	-	99	90.504	Phascolarctos_cinereus
ENSSMAG00000003135	-	100	80.223	ENSPLAG00000011449	pcbp3	100	75.750	Poecilia_latipinna
ENSSMAG00000003135	-	99	92.661	ENSPLAG00000004074	-	92	92.661	Poecilia_latipinna
ENSSMAG00000003135	-	100	89.266	ENSPMEG00000021239	pcbp3	100	89.266	Poecilia_mexicana
ENSSMAG00000003135	-	100	89.118	ENSPMEG00000006653	-	100	89.118	Poecilia_mexicana
ENSSMAG00000003135	-	100	96.541	ENSPREG00000020585	-	100	96.541	Poecilia_reticulata
ENSSMAG00000003135	-	97	93.160	ENSPREG00000015736	pcbp3	99	93.160	Poecilia_reticulata
ENSSMAG00000003135	-	100	96.855	ENSPNYG00000013205	-	100	96.855	Pundamilia_nyererei
ENSSMAG00000003135	-	97	94.194	ENSPNYG00000012326	pcbp3	95	94.194	Pundamilia_nyererei
ENSSMAG00000003135	-	100	98.131	ENSPNAG00000015104	pcbp3	100	98.131	Pygocentrus_nattereri
ENSSMAG00000003135	-	96	94.098	ENSPNAG00000008541	-	98	94.098	Pygocentrus_nattereri
ENSSMAG00000003135	-	98	96.815	ENSRNOG00000001245	Pcbp3	98	96.815	Rattus_norvegicus
ENSSMAG00000003135	-	98	85.890	ENSRBIG00000028177	-	90	85.890	Rhinopithecus_bieti
ENSSMAG00000003135	-	98	91.018	ENSSHAG00000007890	-	99	91.018	Sarcophilus_harrisii
ENSSMAG00000003135	-	100	89.143	ENSSFOG00015014706	pcbp3	100	89.143	Scleropages_formosus
ENSSMAG00000003135	-	100	98.165	ENSSFOG00015010205	pcbp3	100	98.165	Scleropages_formosus
ENSSMAG00000003135	-	94	85.382	ENSSFOG00015007118	-	93	85.382	Scleropages_formosus
ENSSMAG00000003135	-	100	92.727	ENSSDUG00000008502	-	100	92.727	Seriola_dumerili
ENSSMAG00000003135	-	97	87.651	ENSSDUG00000011608	pcbp3	99	87.651	Seriola_dumerili
ENSSMAG00000003135	-	97	87.651	ENSSLDG00000008518	pcbp3	99	87.651	Seriola_lalandi_dorsalis
ENSSMAG00000003135	-	100	99.083	ENSSLDG00000020161	-	100	99.083	Seriola_lalandi_dorsalis
ENSSMAG00000003135	-	92	81.100	ENSSPUG00000013214	-	90	85.354	Sphenodon_punctatus
ENSSMAG00000003135	-	95	94.881	ENSSPAG00000004190	-	100	94.881	Stegastes_partitus
ENSSMAG00000003135	-	100	77.714	ENSSPAG00000023341	-	100	77.714	Stegastes_partitus
ENSSMAG00000003135	-	98	88.024	ENSTGUG00000003316	-	99	88.024	Taeniopygia_guttata
ENSSMAG00000003135	-	98	89.809	ENSTGUG00000008158	-	99	89.809	Taeniopygia_guttata
ENSSMAG00000003135	-	95	98.958	ENSTRUG00000006280	-	95	96.633	Takifugu_rubripes
ENSSMAG00000003135	-	100	91.471	ENSTRUG00000013604	pcbp3	100	91.471	Takifugu_rubripes
ENSSMAG00000003135	-	98	84.034	ENSTTRG00000015075	-	99	84.034	Tursiops_truncatus
ENSSMAG00000003135	-	98	89.521	ENSXETG00000011483	pcbp1	99	89.521	Xenopus_tropicalis
ENSSMAG00000003135	-	93	74.221	ENSXETG00000010491	pcbp2	77	74.221	Xenopus_tropicalis
ENSSMAG00000003135	-	100	89.266	ENSXCOG00000020481	pcbp3	100	89.266	Xiphophorus_couchianus
ENSSMAG00000003135	-	100	90.057	ENSXMAG00000008175	pcbp3	100	90.057	Xiphophorus_maculatus
ENSSMAG00000003135	-	100	98.777	ENSXMAG00000028711	-	100	98.777	Xiphophorus_maculatus