EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000003168 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: zgc:73191
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 12153 bases
Position: chr4:19303426-19315578
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000005166	RNase_T	PF00929.24	1.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000005241	-	6142	-	ENSSMAP00000005166	275 (aa)	-	A0A2U9B9B5

Gene Model

Click here to download ENSSMAG00000003168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000003168	smfn	85	69.528	ENSG00000076043	REXO2	98	77.297	Homo_sapiens
ENSSMAG00000003168	smfn	85	69.068	ENSAMEG00000013263	REXO2	98	69.068	Ailuropoda_melanoleuca
ENSSMAG00000003168	smfn	67	84.783	ENSACIG00000023553	smfn	99	84.783	Amphilophus_citrinellus
ENSSMAG00000003168	smfn	57	71.605	ENSAOCG00000011565	smfn	99	71.605	Amphiprion_ocellaris
ENSSMAG00000003168	smfn	99	71.168	ENSAPEG00000012435	smfn	99	71.168	Amphiprion_percula
ENSSMAG00000003168	smfn	99	72.527	ENSATEG00000015385	smfn	97	72.527	Anabas_testudineus
ENSSMAG00000003168	smfn	73	74.000	ENSAPLG00000005045	REXO2	98	74.000	Anas_platyrhynchos
ENSSMAG00000003168	smfn	66	71.429	ENSACAG00000011631	REXO2	85	71.429	Anolis_carolinensis
ENSSMAG00000003168	smfn	85	69.957	ENSANAG00000020834	REXO2	98	69.957	Aotus_nancymaae
ENSSMAG00000003168	smfn	99	69.597	ENSACLG00000024566	smfn	95	85.635	Astatotilapia_calliptera
ENSSMAG00000003168	smfn	85	69.068	ENSBTAG00000005843	REXO2	98	69.068	Bos_taurus
ENSSMAG00000003168	smfn	64	46.328	WBGene00007429	C08B6.8	88	52.174	Caenorhabditis_elegans
ENSSMAG00000003168	smfn	85	69.957	ENSCJAG00000012434	REXO2	98	69.957	Callithrix_jacchus
ENSSMAG00000003168	smfn	85	69.099	ENSCAFG00000013511	REXO2	98	69.099	Canis_familiaris
ENSSMAG00000003168	smfn	85	69.957	ENSCAFG00020002513	REXO2	98	69.957	Canis_lupus_dingo
ENSSMAG00000003168	smfn	85	69.099	ENSCHIG00000009264	REXO2	98	69.099	Capra_hircus
ENSSMAG00000003168	smfn	70	67.188	ENSTSYG00000027948	-	98	67.188	Carlito_syrichta
ENSSMAG00000003168	smfn	85	69.492	ENSTSYG00000002237	REXO2	98	69.492	Carlito_syrichta
ENSSMAG00000003168	smfn	67	77.838	ENSCAPG00000006093	REXO2	98	77.838	Cavia_aperea
ENSSMAG00000003168	smfn	85	69.915	ENSCPOG00000010548	REXO2	98	69.915	Cavia_porcellus
ENSSMAG00000003168	smfn	85	69.957	ENSCCAG00000034979	REXO2	98	69.957	Cebus_capucinus
ENSSMAG00000003168	smfn	85	69.528	ENSCATG00000015278	REXO2	98	69.528	Cercocebus_atys
ENSSMAG00000003168	smfn	85	69.787	ENSCLAG00000011195	REXO2	98	69.787	Chinchilla_lanigera
ENSSMAG00000003168	smfn	85	69.528	ENSCSAG00000002754	REXO2	98	69.528	Chlorocebus_sabaeus
ENSSMAG00000003168	smfn	85	67.949	ENSCHOG00000000642	-	98	67.949	Choloepus_hoffmanni
ENSSMAG00000003168	smfn	52	70.423	ENSCPBG00000009359	REXO2	98	70.423	Chrysemys_picta_bellii
ENSSMAG00000003168	smfn	69	56.316	ENSCING00000009858	-	92	56.316	Ciona_intestinalis
ENSSMAG00000003168	smfn	85	69.528	ENSCANG00000034756	REXO2	98	69.528	Colobus_angolensis_palliatus
ENSSMAG00000003168	smfn	72	77.665	ENSCGRG00001019814	-	83	77.665	Cricetulus_griseus_chok1gshd
ENSSMAG00000003168	smfn	72	75.127	ENSCGRG00001010922	-	96	75.127	Cricetulus_griseus_chok1gshd
ENSSMAG00000003168	smfn	72	76.650	ENSCGRG00001013673	-	96	76.650	Cricetulus_griseus_chok1gshd
ENSSMAG00000003168	smfn	72	77.665	ENSCGRG00000006235	Rexo2	83	77.665	Cricetulus_griseus_crigri
ENSSMAG00000003168	smfn	99	66.544	ENSCSEG00000007214	smfn	98	66.912	Cynoglossus_semilaevis
ENSSMAG00000003168	smfn	67	80.328	ENSCVAG00000012008	smfn	99	80.328	Cyprinodon_variegatus
ENSSMAG00000003168	smfn	83	72.803	ENSDARG00000009806	smfn	91	72.803	Danio_rerio
ENSSMAG00000003168	smfn	63	82.558	ENSDNOG00000046533	REXO2	82	82.558	Dasypus_novemcinctus
ENSSMAG00000003168	smfn	70	61.458	ENSDORG00000025142	-	86	60.406	Dipodomys_ordii
ENSSMAG00000003168	smfn	80	72.197	ENSDORG00000011255	Rexo2	94	72.197	Dipodomys_ordii
ENSSMAG00000003168	smfn	66	51.934	FBgn0039115	CG10214	86	51.934	Drosophila_melanogaster
ENSSMAG00000003168	smfn	65	74.860	ENSEBUG00000013964	REXO2	61	74.860	Eptatretus_burgeri
ENSSMAG00000003168	smfn	72	77.665	ENSEASG00005006674	REXO2	83	77.665	Equus_asinus_asinus
ENSSMAG00000003168	smfn	72	77.665	ENSECAG00000005988	REXO2	83	77.665	Equus_caballus
ENSSMAG00000003168	smfn	99	63.763	ENSELUG00000020072	smfn	98	63.763	Esox_lucius
ENSSMAG00000003168	smfn	85	69.099	ENSFCAG00000018632	REXO2	98	69.099	Felis_catus
ENSSMAG00000003168	smfn	68	76.344	ENSFALG00000010044	REXO2	92	76.344	Ficedula_albicollis
ENSSMAG00000003168	smfn	85	69.915	ENSFDAG00000011764	REXO2	98	69.915	Fukomys_damarensis
ENSSMAG00000003168	smfn	69	82.632	ENSGMOG00000006370	smfn	98	82.632	Gadus_morhua
ENSSMAG00000003168	smfn	71	78.351	ENSGALG00000035980	REXO2	85	77.665	Gallus_gallus
ENSSMAG00000003168	smfn	98	65.827	ENSGAFG00000015349	smfn	98	65.827	Gambusia_affinis
ENSSMAG00000003168	smfn	72	83.333	ENSGACG00000020096	smfn	98	83.333	Gasterosteus_aculeatus
ENSSMAG00000003168	smfn	80	71.041	ENSGAGG00000021126	REXO2	96	71.041	Gopherus_agassizii
ENSSMAG00000003168	smfn	85	69.528	ENSGGOG00000023267	REXO2	98	69.528	Gorilla_gorilla
ENSSMAG00000003168	smfn	99	52.747	ENSHBUG00000020097	REXO2	99	52.747	Haplochromis_burtoni
ENSSMAG00000003168	smfn	85	68.085	ENSHGLG00000013556	REXO2	99	68.085	Heterocephalus_glaber_female
ENSSMAG00000003168	smfn	85	68.511	ENSHGLG00100005257	REXO2	99	68.511	Heterocephalus_glaber_male
ENSSMAG00000003168	smfn	65	79.444	ENSHCOG00000007122	smfn	98	79.444	Hippocampus_comes
ENSSMAG00000003168	smfn	72	83.756	ENSIPUG00000020440	rexo2	72	84.615	Ictalurus_punctatus
ENSSMAG00000003168	smfn	85	69.957	ENSSTOG00000012465	REXO2	98	69.957	Ictidomys_tridecemlineatus
ENSSMAG00000003168	smfn	85	69.528	ENSJJAG00000013710	-	98	69.528	Jaculus_jaculus
ENSSMAG00000003168	smfn	85	50.213	ENSJJAG00000022605	-	98	50.213	Jaculus_jaculus
ENSSMAG00000003168	smfn	95	68.441	ENSKMAG00000016795	smfn	90	69.202	Kryptolebias_marmoratus
ENSSMAG00000003168	smfn	67	82.609	ENSLBEG00000006021	smfn	97	82.609	Labrus_bergylta
ENSSMAG00000003168	smfn	76	64.815	ENSLACG00000018623	REXO2	88	64.815	Latimeria_chalumnae
ENSSMAG00000003168	smfn	73	80.000	ENSLOCG00000002389	smfn	95	80.000	Lepisosteus_oculatus
ENSSMAG00000003168	smfn	72	77.665	ENSLAFG00000012451	REXO2	83	77.665	Loxodonta_africana
ENSSMAG00000003168	smfn	85	69.528	ENSMFAG00000041155	REXO2	98	69.528	Macaca_fascicularis
ENSSMAG00000003168	smfn	85	69.528	ENSMMUG00000012269	REXO2	98	69.528	Macaca_mulatta
ENSSMAG00000003168	smfn	85	69.528	ENSMNEG00000033379	REXO2	98	69.528	Macaca_nemestrina
ENSSMAG00000003168	smfn	85	69.528	ENSMLEG00000036571	REXO2	98	69.528	Mandrillus_leucophaeus
ENSSMAG00000003168	smfn	98	74.444	ENSMAMG00000021209	smfn	97	74.444	Mastacembelus_armatus
ENSSMAG00000003168	smfn	99	69.597	ENSMZEG00005020730	REXO2	95	69.597	Maylandia_zebra
ENSSMAG00000003168	smfn	99	69.597	ENSMZEG00005023224	-	95	69.597	Maylandia_zebra
ENSSMAG00000003168	smfn	57	76.250	ENSMGAG00000003026	REXO2	98	76.250	Meleagris_gallopavo
ENSSMAG00000003168	smfn	72	77.665	ENSMAUG00000014576	Rexo2	83	77.665	Mesocricetus_auratus
ENSSMAG00000003168	smfn	85	69.915	ENSMICG00000010094	REXO2	98	69.915	Microcebus_murinus
ENSSMAG00000003168	smfn	85	69.068	ENSMOCG00000009016	Rexo2	98	69.068	Microtus_ochrogaster
ENSSMAG00000003168	smfn	99	64.413	ENSMMOG00000006430	smfn	98	64.413	Mola_mola
ENSSMAG00000003168	smfn	85	68.776	ENSMODG00000013913	REXO2	99	68.776	Monodelphis_domestica
ENSSMAG00000003168	smfn	99	70.863	ENSMALG00000018130	smfn	79	70.863	Monopterus_albus
ENSSMAG00000003168	smfn	72	78.173	MGP_CAROLIEiJ_G0032166	Rexo2	83	78.173	Mus_caroli
ENSSMAG00000003168	smfn	72	77.665	ENSMUSG00000032026	Rexo2	83	77.665	Mus_musculus
ENSSMAG00000003168	smfn	72	77.665	MGP_PahariEiJ_G0015034	Rexo2	83	77.665	Mus_pahari
ENSSMAG00000003168	smfn	72	77.665	MGP_SPRETEiJ_G0033305	Rexo2	83	77.665	Mus_spretus
ENSSMAG00000003168	smfn	85	69.492	ENSMPUG00000003947	REXO2	98	69.492	Mustela_putorius_furo
ENSSMAG00000003168	smfn	72	77.157	ENSMLUG00000009030	REXO2	83	77.157	Myotis_lucifugus
ENSSMAG00000003168	smfn	72	78.173	ENSNGAG00000008819	Rexo2	96	78.173	Nannospalax_galili
ENSSMAG00000003168	smfn	52	56.643	ENSNBRG00000015319	-	92	56.643	Neolamprologus_brichardi
ENSSMAG00000003168	smfn	66	86.188	ENSNBRG00000006529	smfn	95	86.188	Neolamprologus_brichardi
ENSSMAG00000003168	smfn	85	69.528	ENSNLEG00000029745	REXO2	98	69.528	Nomascus_leucogenys
ENSSMAG00000003168	smfn	72	78.680	ENSMEUG00000011558	REXO2	90	78.680	Notamacropus_eugenii
ENSSMAG00000003168	smfn	72	53.299	ENSOPRG00000011076	REXO2	98	48.498	Ochotona_princeps
ENSSMAG00000003168	smfn	63	65.318	ENSODEG00000016046	-	86	65.318	Octodon_degus
ENSSMAG00000003168	smfn	67	77.838	ENSODEG00000009750	-	98	77.838	Octodon_degus
ENSSMAG00000003168	smfn	74	84.729	ENSONIG00000001954	smfn	87	84.729	Oreochromis_niloticus
ENSSMAG00000003168	smfn	72	76.650	ENSOANG00000001754	REXO2	83	76.650	Ornithorhynchus_anatinus
ENSSMAG00000003168	smfn	72	78.173	ENSOCUG00000004274	REXO2	93	69.957	Oryctolagus_cuniculus
ENSSMAG00000003168	smfn	84	74.783	ENSORLG00000005119	smfn	70	74.783	Oryzias_latipes
ENSSMAG00000003168	smfn	99	65.052	ENSORLG00020010121	smfn	70	75.217	Oryzias_latipes_hni
ENSSMAG00000003168	smfn	84	76.087	ENSORLG00015015699	smfn	70	76.087	Oryzias_latipes_hsok
ENSSMAG00000003168	smfn	73	80.597	ENSOMEG00000016878	REXO2	74	80.597	Oryzias_melastigma
ENSSMAG00000003168	smfn	52	78.169	ENSOMEG00000008940	-	99	78.169	Oryzias_melastigma
ENSSMAG00000003168	smfn	85	69.915	ENSOGAG00000016860	REXO2	98	69.915	Otolemur_garnettii
ENSSMAG00000003168	smfn	72	77.665	ENSOARG00000001040	REXO2	92	77.665	Ovis_aries
ENSSMAG00000003168	smfn	85	69.528	ENSPPAG00000039849	REXO2	98	69.528	Pan_paniscus
ENSSMAG00000003168	smfn	85	69.099	ENSPPRG00000007255	REXO2	98	69.099	Panthera_pardus
ENSSMAG00000003168	smfn	67	77.297	ENSPTIG00000015578	REXO2	98	77.297	Panthera_tigris_altaica
ENSSMAG00000003168	smfn	85	69.528	ENSPTRG00000004306	REXO2	98	69.528	Pan_troglodytes
ENSSMAG00000003168	smfn	85	69.528	ENSPANG00000010675	REXO2	98	69.528	Papio_anubis
ENSSMAG00000003168	smfn	98	64.413	ENSPKIG00000000911	smfn	77	85.811	Paramormyrops_kingsleyae
ENSSMAG00000003168	smfn	80	72.398	ENSPSIG00000005151	REXO2	84	69.295	Pelodiscus_sinensis
ENSSMAG00000003168	smfn	67	81.081	ENSPMGG00000007442	smfn	98	81.081	Periophthalmus_magnuspinnatus
ENSSMAG00000003168	smfn	72	62.944	ENSPEMG00000001421	Rexo2	82	62.944	Peromyscus_maniculatus_bairdii
ENSSMAG00000003168	smfn	86	68.487	ENSPCIG00000011227	REXO2	67	65.891	Phascolarctos_cinereus
ENSSMAG00000003168	smfn	98	67.266	ENSPFOG00000017861	smfn	99	84.080	Poecilia_formosa
ENSSMAG00000003168	smfn	90	64.062	ENSPLAG00000007327	REXO2	96	64.062	Poecilia_latipinna
ENSSMAG00000003168	smfn	98	67.626	ENSPMEG00000017343	smfn	98	67.626	Poecilia_mexicana
ENSSMAG00000003168	smfn	98	66.547	ENSPREG00000016438	smfn	98	66.547	Poecilia_reticulata
ENSSMAG00000003168	smfn	85	69.528	ENSPPYG00000003895	REXO2	98	69.528	Pongo_abelii
ENSSMAG00000003168	smfn	85	69.362	ENSPCAG00000005237	REXO2	98	69.362	Procavia_capensis
ENSSMAG00000003168	smfn	71	73.096	ENSPCOG00000027639	REXO2	99	73.096	Propithecus_coquereli
ENSSMAG00000003168	smfn	85	59.149	ENSPVAG00000005295	REXO2	98	59.149	Pteropus_vampyrus
ENSSMAG00000003168	smfn	99	69.231	ENSPNYG00000018401	smfn	95	69.231	Pundamilia_nyererei
ENSSMAG00000003168	smfn	99	64.855	ENSPNAG00000005290	smfn	99	64.855	Pygocentrus_nattereri
ENSSMAG00000003168	smfn	72	77.665	ENSRNOG00000018939	Rexo2	83	77.665	Rattus_norvegicus
ENSSMAG00000003168	smfn	85	69.528	ENSRBIG00000037809	REXO2	98	69.528	Rhinopithecus_bieti
ENSSMAG00000003168	smfn	85	69.528	ENSRROG00000038928	REXO2	98	69.528	Rhinopithecus_roxellana
ENSSMAG00000003168	smfn	66	43.684	YLR059C	REX2	71	43.684	Saccharomyces_cerevisiae
ENSSMAG00000003168	smfn	85	69.957	ENSSBOG00000028651	REXO2	98	69.957	Saimiri_boliviensis_boliviensis
ENSSMAG00000003168	smfn	85	68.776	ENSSHAG00000008008	REXO2	99	68.776	Sarcophilus_harrisii
ENSSMAG00000003168	smfn	67	81.081	ENSSFOG00015022414	smfn	98	81.081	Scleropages_formosus
ENSSMAG00000003168	smfn	99	75.801	ENSSDUG00000015624	smfn	99	75.801	Seriola_dumerili
ENSSMAG00000003168	smfn	99	74.733	ENSSLDG00000014005	smfn	99	74.733	Seriola_lalandi_dorsalis
ENSSMAG00000003168	smfn	57	72.611	ENSSPUG00000006005	REXO2	84	72.611	Sphenodon_punctatus
ENSSMAG00000003168	smfn	67	87.568	ENSSPAG00000001530	smfn	99	87.568	Stegastes_partitus
ENSSMAG00000003168	smfn	85	68.670	ENSSSCG00000015056	REXO2	98	68.670	Sus_scrofa
ENSSMAG00000003168	smfn	71	76.531	ENSTGUG00000000121	REXO2	88	74.146	Taeniopygia_guttata
ENSSMAG00000003168	smfn	79	78.341	ENSTRUG00000021529	smfn	79	78.802	Takifugu_rubripes
ENSSMAG00000003168	smfn	83	75.000	ENSTNIG00000008588	smfn	96	77.880	Tetraodon_nigroviridis
ENSSMAG00000003168	smfn	85	69.528	ENSTBEG00000017040	REXO2	98	69.528	Tupaia_belangeri
ENSSMAG00000003168	smfn	85	68.240	ENSTTRG00000014928	REXO2	98	68.240	Tursiops_truncatus
ENSSMAG00000003168	smfn	85	64.255	ENSUAMG00000019096	REXO2	99	71.649	Ursus_americanus
ENSSMAG00000003168	smfn	85	69.528	ENSUMAG00000003770	REXO2	98	69.528	Ursus_maritimus
ENSSMAG00000003168	smfn	67	58.919	ENSVPAG00000006301	REXO2	98	58.919	Vicugna_pacos
ENSSMAG00000003168	smfn	85	69.528	ENSVVUG00000025223	REXO2	98	69.528	Vulpes_vulpes
ENSSMAG00000003168	smfn	79	73.733	ENSXETG00000012648	rexo2	96	68.619	Xenopus_tropicalis
ENSSMAG00000003168	smfn	69	80.000	ENSXCOG00000018838	smfn	94	81.622	Xiphophorus_couchianus
ENSSMAG00000003168	smfn	97	65.455	ENSXMAG00000021125	smfn	86	65.455	Xiphophorus_maculatus