EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000003200 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4a
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
14357 bases
Position
chr19:5236207-5250563
Accession
ZDB-GENE-030605-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000005344ResIIIPF04851.158.1e-1011
ENSSMAP00000005293ResIIIPF04851.158.3e-1011
ENSSMAP00000005344BRKPF07533.162.4e-1611
ENSSMAP00000005293BRKPF07533.162.4e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000005419-4890-ENSSMAP000000053441629 (aa)--
ENSSMAT00000005366-5904-ENSSMAP000000052931643 (aa)--
Gene Model
Click here to download ENSSMAG00000003200's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003200's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000003200smarca4a10081.541ENSSMAG00000014082-9981.912
ENSSMAG00000003200smarca4a9970.346ENSSMAG00000013707SMARCA29372.793
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000003200smarca4a10085.619ENSG00000127616SMARCA49992.795Homo_sapiens
ENSSMAG00000003200smarca4a7692.794ENSAPOG00000003509smarca4a9990.188Acanthochromis_polyacanthus
ENSSMAG00000003200smarca4a9583.489ENSAPOG00000004542SMARCA49985.374Acanthochromis_polyacanthus
ENSSMAG00000003200smarca4a10082.522ENSAMEG00000010868SMARCA410083.050Ailuropoda_melanoleuca
ENSSMAG00000003200smarca4a9995.110ENSACIG00000021550smarca4a9995.110Amphilophus_citrinellus
ENSSMAG00000003200smarca4a9385.639ENSACIG00000003035-9785.855Amphilophus_citrinellus
ENSSMAG00000003200smarca4a9090.841ENSAOCG00000019167smarca4a10091.371Amphiprion_ocellaris
ENSSMAG00000003200smarca4a9287.127ENSAOCG00000009450-9787.525Amphiprion_ocellaris
ENSSMAG00000003200smarca4a9090.977ENSAPEG00000015559smarca4a10091.510Amphiprion_percula
ENSSMAG00000003200smarca4a9782.682ENSAPEG00000023108-9883.608Amphiprion_percula
ENSSMAG00000003200smarca4a9983.727ENSATEG00000001094-9584.688Anabas_testudineus
ENSSMAG00000003200smarca4a10093.435ENSATEG00000011524smarca4a10093.678Anabas_testudineus
ENSSMAG00000003200smarca4a9787.399ENSANAG00000036991SMARCA410083.304Aotus_nancymaae
ENSSMAG00000003200smarca4a9584.774ENSACLG00000008638-9884.555Astatotilapia_calliptera
ENSSMAG00000003200smarca4a9794.940ENSACLG00000000163smarca4a9994.737Astatotilapia_calliptera
ENSSMAG00000003200smarca4a9884.142ENSAMXG00000021023smarca4a9886.573Astyanax_mexicanus
ENSSMAG00000003200smarca4a9485.779ENSAMXG00000011238-9487.381Astyanax_mexicanus
ENSSMAG00000003200smarca4a10086.104ENSBTAG00000019220SMARCA49886.025Bos_taurus
ENSSMAG00000003200smarca4a10082.484ENSCJAG00000005936SMARCA410083.304Callithrix_jacchus
ENSSMAG00000003200smarca4a10085.447ENSCAFG00000017584SMARCA410085.749Canis_familiaris
ENSSMAG00000003200smarca4a10084.615ENSCAFG00020024620SMARCA49985.749Canis_lupus_dingo
ENSSMAG00000003200smarca4a10082.606ENSCHIG00000015318SMARCA49882.382Capra_hircus
ENSSMAG00000003200smarca4a10085.801ENSTSYG00000012966SMARCA410085.983Carlito_syrichta
ENSSMAG00000003200smarca4a9281.358ENSCAPG00000015932SMARCA49488.899Cavia_aperea
ENSSMAG00000003200smarca4a10085.266ENSCPOG00000015549SMARCA49987.069Cavia_porcellus
ENSSMAG00000003200smarca4a10082.572ENSCCAG00000031660SMARCA49982.993Cebus_capucinus
ENSSMAG00000003200smarca4a10085.568ENSCATG00000029530SMARCA410085.809Cercocebus_atys
ENSSMAG00000003200smarca4a10085.853ENSCLAG00000011946SMARCA410086.035Chinchilla_lanigera
ENSSMAG00000003200smarca4a10085.576ENSCPBG00000009994SMARCA49987.335Chrysemys_picta_bellii
ENSSMAG00000003200smarca4a10085.507ENSCANG00000036013SMARCA410085.809Colobus_angolensis_palliatus
ENSSMAG00000003200smarca4a10085.326ENSCGRG00001016732Smarca410085.568Cricetulus_griseus_chok1gshd
ENSSMAG00000003200smarca4a10085.326ENSCGRG00000017242Smarca410085.568Cricetulus_griseus_crigri
ENSSMAG00000003200smarca4a9693.640ENSCSEG00000014771smarca4a9992.604Cynoglossus_semilaevis
ENSSMAG00000003200smarca4a9785.120ENSCVAG00000003018-9884.994Cyprinodon_variegatus
ENSSMAG00000003200smarca4a9991.929ENSCVAG00000006979smarca4a9992.426Cyprinodon_variegatus
ENSSMAG00000003200smarca4a9282.872ENSDARG00000104339SMARCA49582.586Danio_rerio
ENSSMAG00000003200smarca4a10088.701ENSDARG00000077226smarca4a10088.761Danio_rerio
ENSSMAG00000003200smarca4a10078.216ENSDNOG00000048847SMARCA49090.152Dasypus_novemcinctus
ENSSMAG00000003200smarca4a8480.186ENSDORG00000002544Smarca49579.590Dipodomys_ordii
ENSSMAG00000003200smarca4a9475.893ENSETEG00000013361SMARCA49476.150Echinops_telfairi
ENSSMAG00000003200smarca4a10085.326ENSEASG00005006167SMARCA410083.797Equus_asinus_asinus
ENSSMAG00000003200smarca4a10085.386ENSECAG00000008334SMARCA49887.802Equus_caballus
ENSSMAG00000003200smarca4a9878.177ENSELUG00000023232-9777.610Esox_lucius
ENSSMAG00000003200smarca4a10090.315ENSELUG00000010247smarca4a9890.458Esox_lucius
ENSSMAG00000003200smarca4a10085.292ENSFCAG00000004894SMARCA410085.533Felis_catus
ENSSMAG00000003200smarca4a7390.420ENSFALG00000004208SMARCA49285.499Ficedula_albicollis
ENSSMAG00000003200smarca4a9087.373ENSFDAG00000012237SMARCA49787.643Fukomys_damarensis
ENSSMAG00000003200smarca4a9691.323ENSFHEG00000010182smarca4a10091.627Fundulus_heteroclitus
ENSSMAG00000003200smarca4a10084.643ENSFHEG00000007902-9885.354Fundulus_heteroclitus
ENSSMAG00000003200smarca4a9381.046ENSGMOG00000005756-9081.030Gadus_morhua
ENSSMAG00000003200smarca4a9090.492ENSGMOG00000002649smarca4a9491.071Gadus_morhua
ENSSMAG00000003200smarca4a7385.596ENSGALG00000047145SMARCA410086.695Gallus_gallus
ENSSMAG00000003200smarca4a9190.533ENSGAFG00000014900smarca4a10091.533Gambusia_affinis
ENSSMAG00000003200smarca4a9782.260ENSGAFG00000008827-9482.307Gambusia_affinis
ENSSMAG00000003200smarca4a9893.734ENSGACG00000006691smarca4a9893.672Gasterosteus_aculeatus
ENSSMAG00000003200smarca4a9979.604ENSGACG00000016033-9979.781Gasterosteus_aculeatus
ENSSMAG00000003200smarca4a10085.792ENSGAGG00000016757SMARCA49987.563Gopherus_agassizii
ENSSMAG00000003200smarca4a10085.568ENSGGOG00000009882SMARCA410085.809Gorilla_gorilla
ENSSMAG00000003200smarca4a10095.079ENSHBUG00000021172smarca4a10094.836Haplochromis_burtoni
ENSSMAG00000003200smarca4a10083.969ENSHBUG00000005447-9885.079Haplochromis_burtoni
ENSSMAG00000003200smarca4a10084.847ENSHGLG00000010519SMARCA410085.147Heterocephalus_glaber_female
ENSSMAG00000003200smarca4a10084.741ENSHGLG00100013774SMARCA410084.801Heterocephalus_glaber_male
ENSSMAG00000003200smarca4a9593.990ENSHCOG00000009510smarca4a9693.997Hippocampus_comes
ENSSMAG00000003200smarca4a9883.911ENSIPUG00000016346-9783.719Ictalurus_punctatus
ENSSMAG00000003200smarca4a10088.996ENSIPUG00000006107smarca4a10088.996Ictalurus_punctatus
ENSSMAG00000003200smarca4a10085.326ENSSTOG00000007939SMARCA410085.568Ictidomys_tridecemlineatus
ENSSMAG00000003200smarca4a10084.716ENSJJAG00000012877Smarca410084.597Jaculus_jaculus
ENSSMAG00000003200smarca4a9784.131ENSKMAG00000019518-9887.475Kryptolebias_marmoratus
ENSSMAG00000003200smarca4a10092.822ENSKMAG00000011931smarca4a9994.332Kryptolebias_marmoratus
ENSSMAG00000003200smarca4a8076.764ENSLBEG00000020655-9873.681Labrus_bergylta
ENSSMAG00000003200smarca4a9591.560ENSLBEG00000017383smarca4a9791.726Labrus_bergylta
ENSSMAG00000003200smarca4a5083.555ENSLACG00000015309SMARCA410083.313Latimeria_chalumnae
ENSSMAG00000003200smarca4a10084.951ENSLOCG00000007820smarca4a9985.840Lepisosteus_oculatus
ENSSMAG00000003200smarca4a10085.353ENSLAFG00000001433SMARCA410085.594Loxodonta_africana
ENSSMAG00000003200smarca4a10084.736ENSMFAG00000032146SMARCA49985.809Macaca_fascicularis
ENSSMAG00000003200smarca4a10085.568ENSMMUG00000012042SMARCA49591.152Macaca_mulatta
ENSSMAG00000003200smarca4a10085.550ENSMNEG00000028512SMARCA410085.792Macaca_nemestrina
ENSSMAG00000003200smarca4a10085.473ENSMLEG00000034976SMARCA410085.594Mandrillus_leucophaeus
ENSSMAG00000003200smarca4a10094.711ENSMAMG00000009256smarca4a10094.347Mastacembelus_armatus
ENSSMAG00000003200smarca4a9983.193ENSMAMG00000002841-9887.516Mastacembelus_armatus
ENSSMAG00000003200smarca4a9584.524ENSMZEG00005023861-9884.355Maylandia_zebra
ENSSMAG00000003200smarca4a10094.353ENSMZEG00005003889smarca4a10094.171Maylandia_zebra
ENSSMAG00000003200smarca4a10085.051ENSMAUG00000020731Smarca410085.292Mesocricetus_auratus
ENSSMAG00000003200smarca4a10085.353ENSMICG00000009806SMARCA410085.594Microcebus_murinus
ENSSMAG00000003200smarca4a10085.172ENSMOCG00000022209Smarca410085.413Microtus_ochrogaster
ENSSMAG00000003200smarca4a9592.450ENSMMOG00000007571smarca4a9892.268Mola_mola
ENSSMAG00000003200smarca4a9782.839ENSMMOG00000008466-9882.711Mola_mola
ENSSMAG00000003200smarca4a10085.424ENSMODG00000006287SMARCA410085.245Monodelphis_domestica
ENSSMAG00000003200smarca4a9081.843ENSMALG00000021534-9684.498Monopterus_albus
ENSSMAG00000003200smarca4a9693.770ENSMALG00000003388smarca4a10093.625Monopterus_albus
ENSSMAG00000003200smarca4a10085.438MGP_CAROLIEiJ_G0031879Smarca410085.816Mus_caroli
ENSSMAG00000003200smarca4a10085.438ENSMUSG00000032187Smarca410085.680Mus_musculus
ENSSMAG00000003200smarca4a10085.931MGP_PahariEiJ_G0014745Smarca410086.065Mus_pahari
ENSSMAG00000003200smarca4a10085.438MGP_SPRETEiJ_G0033003Smarca410085.816Mus_spretus
ENSSMAG00000003200smarca4a10085.507ENSMPUG00000005711SMARCA410085.749Mustela_putorius_furo
ENSSMAG00000003200smarca4a10085.870ENSMLUG00000004491-10085.438Myotis_lucifugus
ENSSMAG00000003200smarca4a10085.654ENSNGAG00000021852Smarca410085.593Nannospalax_galili
ENSSMAG00000003200smarca4a9589.891ENSNBRG00000011457smarca4a9690.844Neolamprologus_brichardi
ENSSMAG00000003200smarca4a9082.724ENSNBRG00000018865-9984.808Neolamprologus_brichardi
ENSSMAG00000003200smarca4a10079.483ENSNLEG00000012389SMARCA49484.951Nomascus_leucogenys
ENSSMAG00000003200smarca4a8093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSSMAG00000003200smarca4a10084.070ENSODEG00000017127SMARCA410084.163Octodon_degus
ENSSMAG00000003200smarca4a10083.969ENSONIG00000018040-9983.947Oreochromis_niloticus
ENSSMAG00000003200smarca4a10094.350ENSONIG00000008196smarca4a10094.168Oreochromis_niloticus
ENSSMAG00000003200smarca4a9880.535ENSOCUG00000001787SMARCA49881.633Oryctolagus_cuniculus
ENSSMAG00000003200smarca4a9692.250ENSORLG00000015452smarca4a10092.462Oryzias_latipes
ENSSMAG00000003200smarca4a9583.458ENSORLG00000003955-9882.103Oryzias_latipes
ENSSMAG00000003200smarca4a10092.097ENSORLG00020004611smarca4a10092.462Oryzias_latipes_hni
ENSSMAG00000003200smarca4a9583.468ENSORLG00020009728-9882.255Oryzias_latipes_hni
ENSSMAG00000003200smarca4a10092.097ENSORLG00015016560smarca4a10092.462Oryzias_latipes_hsok
ENSSMAG00000003200smarca4a9983.122ENSORLG00015007739-9583.417Oryzias_latipes_hsok
ENSSMAG00000003200smarca4a10092.701ENSOMEG00000007486smarca4a10092.883Oryzias_melastigma
ENSSMAG00000003200smarca4a9783.436ENSOMEG00000016626-9583.615Oryzias_melastigma
ENSSMAG00000003200smarca4a9084.118ENSOGAG00000016148SMARCA410085.477Otolemur_garnettii
ENSSMAG00000003200smarca4a9885.785ENSOARG00000017454SMARCA49688.154Ovis_aries
ENSSMAG00000003200smarca4a10085.568ENSPPAG00000043191SMARCA410085.809Pan_paniscus
ENSSMAG00000003200smarca4a10085.292ENSPPRG00000000064SMARCA410085.533Panthera_pardus
ENSSMAG00000003200smarca4a7985.370ENSPTIG00000017447SMARCA410080.585Panthera_tigris_altaica
ENSSMAG00000003200smarca4a10085.568ENSPTRG00000010488SMARCA410085.809Pan_troglodytes
ENSSMAG00000003200smarca4a10084.838ENSPANG00000011042SMARCA49985.913Papio_anubis
ENSSMAG00000003200smarca4a10088.445ENSPKIG00000007770SMARCA49888.042Paramormyrops_kingsleyae
ENSSMAG00000003200smarca4a10084.760ENSPKIG00000010087-9786.308Paramormyrops_kingsleyae
ENSSMAG00000003200smarca4a10081.563ENSPSIG00000005547SMARCA410081.388Pelodiscus_sinensis
ENSSMAG00000003200smarca4a10085.232ENSPEMG00000020389Smarca410085.473Peromyscus_maniculatus_bairdii
ENSSMAG00000003200smarca4a10086.171ENSPCIG00000017138SMARCA49987.704Phascolarctos_cinereus
ENSSMAG00000003200smarca4a10083.859ENSPFOG00000012930-9984.455Poecilia_formosa
ENSSMAG00000003200smarca4a10089.880ENSPFOG00000007892smarca4a10091.024Poecilia_formosa
ENSSMAG00000003200smarca4a9786.869ENSPLAG00000018616-9886.679Poecilia_latipinna
ENSSMAG00000003200smarca4a10089.940ENSPLAG00000014294smarca4a10091.084Poecilia_latipinna
ENSSMAG00000003200smarca4a9584.220ENSPMEG00000008929-9885.108Poecilia_mexicana
ENSSMAG00000003200smarca4a9590.310ENSPMEG00000003725smarca4a9791.260Poecilia_mexicana
ENSSMAG00000003200smarca4a9584.398ENSPREG00000014823-9784.919Poecilia_reticulata
ENSSMAG00000003200smarca4a10089.730ENSPREG00000014608smarca4a10090.511Poecilia_reticulata
ENSSMAG00000003200smarca4a10084.537ENSPPYG00000009568SMARCA410084.896Pongo_abelii
ENSSMAG00000003200smarca4a7986.755ENSPCAG00000014054SMARCA47592.248Procavia_capensis
ENSSMAG00000003200smarca4a10085.413ENSPCOG00000023011SMARCA410085.654Propithecus_coquereli
ENSSMAG00000003200smarca4a9682.047ENSPVAG00000007787SMARCA49680.935Pteropus_vampyrus
ENSSMAG00000003200smarca4a9385.441ENSPNYG00000023995-9885.526Pundamilia_nyererei
ENSSMAG00000003200smarca4a9594.373ENSPNYG00000000717smarca4a9694.189Pundamilia_nyererei
ENSSMAG00000003200smarca4a9585.996ENSPNAG00000006636-9386.702Pygocentrus_nattereri
ENSSMAG00000003200smarca4a9882.793ENSPNAG00000024136smarca4a9785.341Pygocentrus_nattereri
ENSSMAG00000003200smarca4a10085.438ENSRNOG00000009271Smarca410085.680Rattus_norvegicus
ENSSMAG00000003200smarca4a10084.675ENSRBIG00000038696SMARCA49985.749Rhinopithecus_bieti
ENSSMAG00000003200smarca4a10085.507ENSRROG00000045509SMARCA410085.749Rhinopithecus_roxellana
ENSSMAG00000003200smarca4a10085.317ENSSBOG00000026896SMARCA49986.650Saimiri_boliviensis_boliviensis
ENSSMAG00000003200smarca4a10086.171ENSSHAG00000001642SMARCA49987.704Sarcophilus_harrisii
ENSSMAG00000003200smarca4a10089.057ENSSFOG00015013823smarca410088.452Scleropages_formosus
ENSSMAG00000003200smarca4a9485.317ENSSFOG00015009921-9490.030Scleropages_formosus
ENSSMAG00000003200smarca4a10089.903ENSSDUG00000017298smarca4a9991.682Seriola_dumerili
ENSSMAG00000003200smarca4a9984.681ENSSDUG00000005388-10084.029Seriola_dumerili
ENSSMAG00000003200smarca4a9387.402ENSSLDG00000023663-9787.877Seriola_lalandi_dorsalis
ENSSMAG00000003200smarca4a10096.596ENSSLDG00000024486smarca4a10096.596Seriola_lalandi_dorsalis
ENSSMAG00000003200smarca4a6295.652ENSSARG00000013477SMARCA48295.652Sorex_araneus
ENSSMAG00000003200smarca4a9583.365ENSSPUG00000004558SMARCA49884.251Sphenodon_punctatus
ENSSMAG00000003200smarca4a10083.106ENSSPAG00000012533-9983.243Stegastes_partitus
ENSSMAG00000003200smarca4a10095.502ENSSPAG00000004248smarca4a10095.441Stegastes_partitus
ENSSMAG00000003200smarca4a10085.654ENSSSCG00000013629SMARCA410085.714Sus_scrofa
ENSSMAG00000003200smarca4a9581.853ENSTRUG00000001378SMARCA49482.614Takifugu_rubripes
ENSSMAG00000003200smarca4a9086.459ENSTRUG00000004885smarca4a10086.662Takifugu_rubripes
ENSSMAG00000003200smarca4a7191.844ENSTNIG00000004859-10091.844Tetraodon_nigroviridis
ENSSMAG00000003200smarca4a10081.374ENSTNIG00000004536SMARCA49983.095Tetraodon_nigroviridis
ENSSMAG00000003200smarca4a50100.000ENSTBEG00000000707-52100.000Tupaia_belangeri
ENSSMAG00000003200smarca4a10083.802ENSTTRG00000009519SMARCA410083.742Tursiops_truncatus
ENSSMAG00000003200smarca4a10085.507ENSUAMG00000014661SMARCA410085.749Ursus_americanus
ENSSMAG00000003200smarca4a9383.420ENSUMAG00000022005SMARCA49890.068Ursus_maritimus
ENSSMAG00000003200smarca4a10084.615ENSVVUG00000017820SMARCA49785.749Vulpes_vulpes
ENSSMAG00000003200smarca4a10082.424ENSXETG00000009355smarca49984.320Xenopus_tropicalis
ENSSMAG00000003200smarca4a9783.471ENSXCOG00000013494-9484.211Xiphophorus_couchianus
ENSSMAG00000003200smarca4a10083.492ENSXMAG00000007030-9984.267Xiphophorus_maculatus
ENSSMAG00000003200smarca4a10090.217ENSXMAG00000006321smarca4a10091.123Xiphophorus_maculatus

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