EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000003204 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171929
Alias: -
Full Name: zgc:171929
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3553 bases
Position: chr4:19325281-19328833
Accession: ZDB-GENE-070820-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000005203	zf-C2H2	PF00096.26	6.6e-17	1	3
ENSSMAP00000005203	zf-C2H2	PF00096.26	6.6e-17	2	3
ENSSMAP00000005203	zf-C2H2	PF00096.26	6.6e-17	3	3
ENSSMAP00000005203	zf-met	PF12874.7	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000005278	-	863	-	ENSSMAP00000005203	235 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000003204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003204's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000003204	zgc:171929	63	38.462	ENSSMAG00000014864	-	61	38.889
ENSSMAG00000003204	zgc:171929	54	40.299	ENSSMAG00000013663	-	87	40.426
ENSSMAG00000003204	zgc:171929	57	42.857	ENSSMAG00000019949	-	60	37.037
ENSSMAG00000003204	zgc:171929	69	42.169	ENSSMAG00000007396	-	72	42.169
ENSSMAG00000003204	zgc:171929	58	46.939	ENSSMAG00000021251	-	89	41.489
ENSSMAG00000003204	zgc:171929	68	39.785	ENSSMAG00000006197	-	80	39.785
ENSSMAG00000003204	zgc:171929	54	39.344	ENSSMAG00000014844	-	70	39.344
ENSSMAG00000003204	zgc:171929	54	42.857	ENSSMAG00000005081	-	52	38.843
ENSSMAG00000003204	zgc:171929	53	39.759	ENSSMAG00000015041	si:dkey-7i4.5	66	39.759
ENSSMAG00000003204	zgc:171929	79	41.975	ENSSMAG00000017045	-	65	41.975
ENSSMAG00000003204	zgc:171929	66	35.714	ENSSMAG00000005076	-	79	35.537
ENSSMAG00000003204	zgc:171929	73	43.902	ENSSMAG00000013291	-	82	43.902
ENSSMAG00000003204	zgc:171929	70	35.000	ENSSMAG00000019980	-	54	33.333
ENSSMAG00000003204	zgc:171929	53	41.304	ENSSMAG00000006825	-	80	41.304
ENSSMAG00000003204	zgc:171929	65	39.362	ENSSMAG00000003594	-	86	38.776
ENSSMAG00000003204	zgc:171929	57	42.697	ENSSMAG00000009685	-	83	42.697
ENSSMAG00000003204	zgc:171929	57	47.059	ENSSMAG00000009609	-	86	45.455
ENSSMAG00000003204	zgc:171929	73	40.299	ENSSMAG00000009115	-	92	40.299
ENSSMAG00000003204	zgc:171929	55	45.652	ENSSMAG00000013828	-	55	38.667
ENSSMAG00000003204	zgc:171929	57	44.318	ENSSMAG00000015282	-	63	44.318
ENSSMAG00000003204	zgc:171929	80	39.706	ENSSMAG00000002391	ZNF319	70	39.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000003204	zgc:171929	74	89.595	ENSAPOG00000006365	zgc:171929	79	89.595	Acanthochromis_polyacanthus
ENSSMAG00000003204	zgc:171929	72	91.124	ENSAOCG00000010460	zgc:171929	70	91.124	Amphiprion_ocellaris
ENSSMAG00000003204	zgc:171929	63	64.189	ENSAPLG00000016199	OVOL2	79	64.189	Anas_platyrhynchos
ENSSMAG00000003204	zgc:171929	55	65.891	ENSACAG00000014216	OVOL2	51	65.891	Anolis_carolinensis
ENSSMAG00000003204	zgc:171929	56	67.939	ENSTSYG00000012790	OVOL2	65	67.939	Carlito_syrichta
ENSSMAG00000003204	zgc:171929	60	65.714	ENSCAPG00000005775	OVOL2	83	65.714	Cavia_aperea
ENSSMAG00000003204	zgc:171929	67	59.877	ENSCPBG00000023454	OVOL2	59	68.702	Chrysemys_picta_bellii
ENSSMAG00000003204	zgc:171929	56	67.939	ENSCANG00000033179	OVOL2	57	67.939	Colobus_angolensis_palliatus
ENSSMAG00000003204	zgc:171929	97	72.103	ENSCVAG00000001397	zgc:171929	84	72.103	Cyprinodon_variegatus
ENSSMAG00000003204	zgc:171929	63	63.158	ENSDORG00000016697	Ovol2	62	63.158	Dipodomys_ordii
ENSSMAG00000003204	zgc:171929	97	64.898	ENSELUG00000020356	zgc:171929	82	64.898	Esox_lucius
ENSSMAG00000003204	zgc:171929	83	52.062	ENSFALG00000007594	OVOL2	68	52.062	Ficedula_albicollis
ENSSMAG00000003204	zgc:171929	56	68.702	ENSFDAG00000008730	OVOL2	78	68.702	Fukomys_damarensis
ENSSMAG00000003204	zgc:171929	63	64.189	ENSGALG00000008702	OVOL2	54	64.189	Gallus_gallus
ENSSMAG00000003204	zgc:171929	67	59.877	ENSGAGG00000020202	OVOL2	61	59.877	Gopherus_agassizii
ENSSMAG00000003204	zgc:171929	63	76.351	ENSHCOG00000007100	zgc:171929	82	76.351	Hippocampus_comes
ENSSMAG00000003204	zgc:171929	63	62.500	ENSSTOG00000024979	OVOL2	55	62.500	Ictidomys_tridecemlineatus
ENSSMAG00000003204	zgc:171929	97	79.487	ENSLBEG00000006082	zgc:171929	84	79.487	Labrus_bergylta
ENSSMAG00000003204	zgc:171929	80	51.064	ENSLACG00000011247	OVOL2	70	51.064	Latimeria_chalumnae
ENSSMAG00000003204	zgc:171929	81	85.864	ENSMAMG00000021196	zgc:171929	78	85.864	Mastacembelus_armatus
ENSSMAG00000003204	zgc:171929	63	63.514	ENSMGAG00000006770	OVOL2	85	63.514	Meleagris_gallopavo
ENSSMAG00000003204	zgc:171929	63	63.158	ENSMICG00000032455	OVOL2	55	63.158	Microcebus_murinus
ENSSMAG00000003204	zgc:171929	66	59.375	ENSMODG00000005504	OVOL2	60	59.375	Monodelphis_domestica
ENSSMAG00000003204	zgc:171929	63	62.500	MGP_CAROLIEiJ_G0024381	Ovol2	63	62.500	Mus_caroli
ENSSMAG00000003204	zgc:171929	63	62.500	ENSMUSG00000037279	Ovol2	63	62.500	Mus_musculus
ENSSMAG00000003204	zgc:171929	63	62.500	MGP_PahariEiJ_G0025825	Ovol2	63	62.500	Mus_pahari
ENSSMAG00000003204	zgc:171929	63	62.500	MGP_SPRETEiJ_G0025300	Ovol2	63	62.500	Mus_spretus
ENSSMAG00000003204	zgc:171929	65	62.179	ENSNGAG00000007174	Ovol2	64	62.179	Nannospalax_galili
ENSSMAG00000003204	zgc:171929	66	58.750	ENSMEUG00000011922	OVOL2	57	58.750	Notamacropus_eugenii
ENSSMAG00000003204	zgc:171929	99	70.464	ENSONIG00000004778	zgc:171929	87	70.464	Oreochromis_niloticus
ENSSMAG00000003204	zgc:171929	57	67.669	ENSOANG00000001250	OVOL2	78	67.669	Ornithorhynchus_anatinus
ENSSMAG00000003204	zgc:171929	78	54.255	ENSOCUG00000012116	OVOL2	70	54.255	Oryctolagus_cuniculus
ENSSMAG00000003204	zgc:171929	72	89.349	ENSORLG00015015191	zgc:171929	63	89.349	Oryzias_latipes_hsok
ENSSMAG00000003204	zgc:171929	65	62.179	ENSOGAG00000030325	OVOL2	57	62.179	Otolemur_garnettii
ENSSMAG00000003204	zgc:171929	56	67.939	ENSPPAG00000032300	OVOL2	58	67.939	Pan_paniscus
ENSSMAG00000003204	zgc:171929	68	59.509	ENSPSIG00000006768	OVOL2	70	59.509	Pelodiscus_sinensis
ENSSMAG00000003204	zgc:171929	87	77.941	ENSPMEG00000005347	zgc:171929	94	77.941	Poecilia_mexicana
ENSSMAG00000003204	zgc:171929	63	63.158	ENSPCOG00000013518	OVOL2	55	63.158	Propithecus_coquereli
ENSSMAG00000003204	zgc:171929	56	67.939	ENSPVAG00000001140	OVOL2	55	67.939	Pteropus_vampyrus
ENSSMAG00000003204	zgc:171929	56	68.702	ENSSARG00000006563	OVOL2	78	68.702	Sorex_araneus
ENSSMAG00000003204	zgc:171929	56	67.939	ENSSPUG00000001720	OVOL2	67	67.939	Sphenodon_punctatus
ENSSMAG00000003204	zgc:171929	72	92.899	ENSSPAG00000001700	zgc:171929	79	92.899	Stegastes_partitus
ENSSMAG00000003204	zgc:171929	63	64.189	ENSTGUG00000005909	OVOL2	54	64.189	Taeniopygia_guttata
ENSSMAG00000003204	zgc:171929	62	61.224	ENSXETG00000020587	ovol1	55	61.224	Xenopus_tropicalis
ENSSMAG00000003204	zgc:171929	76	85.393	ENSXMAG00000022405	zgc:171929	86	85.393	Xiphophorus_maculatus