EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000003212 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3448 bases
Position: chr9:17181223-17184670
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000005210	HABP4_PAI-RBP1	PF04774.15	3.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000005285	-	1275	-	ENSSMAP00000005210	370 (aa)	-	A0A2U9BT31

Gene Model

Click here to download ENSSMAG00000003212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000003212	-	99	33.028	ENSSMAG00000018372	serbp1a	99	35.109
ENSSMAG00000003212	-	99	34.940	ENSSMAG00000009311	serbp1b	99	35.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000003212	-	100	71.390	ENSAPOG00000018926	-	100	69.251	Acanthochromis_polyacanthus
ENSSMAG00000003212	-	100	71.123	ENSAOCG00000011621	-	100	71.925	Amphiprion_ocellaris
ENSSMAG00000003212	-	100	71.925	ENSAPEG00000006355	-	100	71.925	Amphiprion_percula
ENSSMAG00000003212	-	99	43.045	ENSAMXG00000000297	-	96	42.318	Astyanax_mexicanus
ENSSMAG00000003212	-	100	63.517	ENSCSEG00000017753	-	100	63.255	Cynoglossus_semilaevis
ENSSMAG00000003212	-	97	52.105	ENSGAFG00000012163	-	98	52.105	Gambusia_affinis
ENSSMAG00000003212	-	100	71.277	ENSMAMG00000020735	-	98	70.745	Mastacembelus_armatus
ENSSMAG00000003212	-	57	44.053	ENSMODG00000000514	-	51	44.196	Monodelphis_domestica
ENSSMAG00000003212	-	99	43.850	ENSPMGG00000017136	-	76	67.105	Periophthalmus_magnuspinnatus
ENSSMAG00000003212	-	100	77.546	ENSSDUG00000002625	-	100	75.718	Seriola_dumerili
ENSSMAG00000003212	-	72	84.644	ENSSLDG00000019167	-	96	85.039	Seriola_lalandi_dorsalis
ENSSMAG00000003212	-	100	70.292	ENSSPAG00000009182	-	100	71.883	Stegastes_partitus
ENSSMAG00000003212	-	100	62.032	ENSTRUG00000015277	IHABP	100	60.753	Takifugu_rubripes
ENSSMAG00000003212	-	99	35.817	ENSTTRG00000005786	-	50	41.553	Tursiops_truncatus