EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000003607 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein Ub
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 11632 bases
Position: chr20:4631606-4643237
Accession: ZDB-GENE-030131-6422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000005829	SAP	PF02037.27	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000005907	-	5416	-	ENSSMAP00000005829	841 (aa)	-	A0A2U9CVM1

Gene Model

Click here to download ENSSMAG00000003607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000003607	hnrnpub	69	51.923	ENSSMAG00000020270	HNRNPUL1	56	51.923
ENSSMAG00000003607	hnrnpub	75	32.759	ENSSMAG00000017226	si:ch211-107m4.1	69	36.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000003607	hnrnpub	83	70.588	ENSG00000153187	HNRNPU	99	64.667	Homo_sapiens
ENSSMAG00000003607	hnrnpub	100	85.731	ENSAPOG00000017400	hnrnpub	86	91.449	Acanthochromis_polyacanthus
ENSSMAG00000003607	hnrnpub	83	70.588	ENSAMEG00000009145	HNRNPU	71	70.588	Ailuropoda_melanoleuca
ENSSMAG00000003607	hnrnpub	100	80.053	ENSACIG00000012138	hnrnpub	96	80.811	Amphilophus_citrinellus
ENSSMAG00000003607	hnrnpub	100	87.039	ENSAOCG00000015843	hnrnpub	85	91.594	Amphiprion_ocellaris
ENSSMAG00000003607	hnrnpub	100	87.039	ENSAPEG00000014679	hnrnpub	85	91.594	Amphiprion_percula
ENSSMAG00000003607	hnrnpub	98	87.575	ENSATEG00000016178	hnrnpub	97	87.093	Anabas_testudineus
ENSSMAG00000003607	hnrnpub	84	68.750	ENSACAG00000004511	HNRNPU	74	61.189	Anolis_carolinensis
ENSSMAG00000003607	hnrnpub	99	52.088	ENSANAG00000033895	-	76	61.702	Aotus_nancymaae
ENSSMAG00000003607	hnrnpub	100	82.164	ENSACLG00000008165	hnrnpub	100	80.618	Astatotilapia_calliptera
ENSSMAG00000003607	hnrnpub	83	70.588	ENSBTAG00000007606	HNRNPU	73	70.588	Bos_taurus
ENSSMAG00000003607	hnrnpub	83	70.588	ENSCJAG00000016914	HNRNPU	73	70.588	Callithrix_jacchus
ENSSMAG00000003607	hnrnpub	77	57.975	ENSCAFG00020000918	HNRNPU	69	61.661	Canis_lupus_dingo
ENSSMAG00000003607	hnrnpub	77	57.975	ENSCHIG00000004900	HNRNPU	69	61.620	Capra_hircus
ENSSMAG00000003607	hnrnpub	95	57.515	ENSCCAG00000037859	-	76	61.525	Cebus_capucinus
ENSSMAG00000003607	hnrnpub	86	57.669	ENSCATG00000035273	HNRNPU	73	70.588	Cercocebus_atys
ENSSMAG00000003607	hnrnpub	77	57.669	ENSCSAG00000009219	HNRNPU	69	61.661	Chlorocebus_sabaeus
ENSSMAG00000003607	hnrnpub	83	70.588	ENSCHOG00000001387	HNRNPU	71	70.588	Choloepus_hoffmanni
ENSSMAG00000003607	hnrnpub	65	61.538	ENSCPBG00000009415	HNRNPU	69	61.324	Chrysemys_picta_bellii
ENSSMAG00000003607	hnrnpub	86	57.669	ENSCANG00000022780	HNRNPU	72	70.588	Colobus_angolensis_palliatus
ENSSMAG00000003607	hnrnpub	80	53.451	ENSCGRG00001020525	Hnrnpu	70	61.336	Cricetulus_griseus_chok1gshd
ENSSMAG00000003607	hnrnpub	100	79.859	ENSCSEG00000010804	hnrnpub	82	85.859	Cynoglossus_semilaevis
ENSSMAG00000003607	hnrnpub	90	73.016	ENSCVAG00000004280	hnrnpub	83	100.000	Cyprinodon_variegatus
ENSSMAG00000003607	hnrnpub	100	59.488	ENSDARG00000004735	hnrnpub	84	61.871	Danio_rerio
ENSSMAG00000003607	hnrnpub	100	58.608	ENSDARG00000015206	hnrnpua	84	60.116	Danio_rerio
ENSSMAG00000003607	hnrnpub	83	75.510	ENSDNOG00000000215	HNRNPU	80	75.510	Dasypus_novemcinctus
ENSSMAG00000003607	hnrnpub	99	51.550	ENSETEG00000014565	HNRNPU	76	62.340	Echinops_telfairi
ENSSMAG00000003607	hnrnpub	78	57.768	ENSEASG00005003017	HNRNPU	69	61.579	Equus_asinus_asinus
ENSSMAG00000003607	hnrnpub	78	57.617	ENSECAG00000007955	HNRNPU	69	61.404	Equus_caballus
ENSSMAG00000003607	hnrnpub	100	55.976	ENSELUG00000011966	hnrnpua	80	73.953	Esox_lucius
ENSSMAG00000003607	hnrnpub	100	71.577	ENSELUG00000010733	hnrnpub	85	75.978	Esox_lucius
ENSSMAG00000003607	hnrnpub	77	58.129	ENSFCAG00000002156	HNRNPU	68	61.484	Felis_catus
ENSSMAG00000003607	hnrnpub	88	72.549	ENSFDAG00000006026	HNRNPU	92	72.549	Fukomys_damarensis
ENSSMAG00000003607	hnrnpub	100	77.687	ENSFHEG00000022639	hnrnpub	85	81.986	Fundulus_heteroclitus
ENSSMAG00000003607	hnrnpub	100	69.231	ENSGMOG00000001755	hnrnpub	83	73.023	Gadus_morhua
ENSSMAG00000003607	hnrnpub	68	81.395	ENSGALG00000010671	HNRNPU	74	78.261	Gallus_gallus
ENSSMAG00000003607	hnrnpub	82	85.036	ENSGAFG00000009369	hnrnpub	83	84.870	Gambusia_affinis
ENSSMAG00000003607	hnrnpub	100	74.887	ENSGACG00000004679	hnrnpub	99	76.351	Gasterosteus_aculeatus
ENSSMAG00000003607	hnrnpub	83	70.588	ENSGGOG00000004061	HNRNPU	73	70.588	Gorilla_gorilla
ENSSMAG00000003607	hnrnpub	100	82.283	ENSHBUG00000012290	hnrnpub	100	80.737	Haplochromis_burtoni
ENSSMAG00000003607	hnrnpub	88	74.510	ENSHGLG00100015093	HNRNPU	92	74.510	Heterocephalus_glaber_male
ENSSMAG00000003607	hnrnpub	82	79.251	ENSHCOG00000020091	hnrnpub	83	79.107	Hippocampus_comes
ENSSMAG00000003607	hnrnpub	74	93.617	ENSIPUG00000007749	hnrnpu	92	81.356	Ictalurus_punctatus
ENSSMAG00000003607	hnrnpub	77	55.655	ENSJJAG00000011371	Hnrnpu	77	61.863	Jaculus_jaculus
ENSSMAG00000003607	hnrnpub	100	79.529	ENSKMAG00000004532	hnrnpub	84	84.670	Kryptolebias_marmoratus
ENSSMAG00000003607	hnrnpub	82	90.086	ENSLBEG00000022520	hnrnpub	100	85.076	Labrus_bergylta
ENSSMAG00000003607	hnrnpub	97	49.409	ENSLACG00000017463	HNRNPU	74	48.813	Latimeria_chalumnae
ENSSMAG00000003607	hnrnpub	85	93.617	ENSLOCG00000016652	hnrnpua	78	89.796	Lepisosteus_oculatus
ENSSMAG00000003607	hnrnpub	94	57.822	ENSLAFG00000021377	HNRNPU	70	61.228	Loxodonta_africana
ENSSMAG00000003607	hnrnpub	86	57.669	ENSMFAG00000037308	HNRNPU	73	70.588	Macaca_fascicularis
ENSSMAG00000003607	hnrnpub	77	57.669	ENSMMUG00000021098	HNRNPU	69	61.661	Macaca_mulatta
ENSSMAG00000003607	hnrnpub	86	57.669	ENSMNEG00000043645	HNRNPU	73	70.588	Macaca_nemestrina
ENSSMAG00000003607	hnrnpub	100	85.986	ENSMAMG00000007196	hnrnpub	100	87.292	Mastacembelus_armatus
ENSSMAG00000003607	hnrnpub	100	82.283	ENSMZEG00005003185	hnrnpub	100	80.856	Maylandia_zebra
ENSSMAG00000003607	hnrnpub	80	52.168	ENSMAUG00000008842	Hnrnpu	70	61.336	Mesocricetus_auratus
ENSSMAG00000003607	hnrnpub	99	52.601	ENSMICG00000004616	HNRNPU	74	70.588	Microcebus_murinus
ENSSMAG00000003607	hnrnpub	79	53.630	ENSMOCG00000015623	Hnrnpu	75	70.175	Microtus_ochrogaster
ENSSMAG00000003607	hnrnpub	83	75.510	ENSMODG00000006515	HNRNPU	73	75.510	Monodelphis_domestica
ENSSMAG00000003607	hnrnpub	96	86.617	ENSMALG00000018243	hnrnpub	80	91.125	Monopterus_albus
ENSSMAG00000003607	hnrnpub	77	54.255	MGP_CAROLIEiJ_G0014962	Hnrnpu	69	61.593	Mus_caroli
ENSSMAG00000003607	hnrnpub	77	54.255	ENSMUSG00000039630	Hnrnpu	70	61.593	Mus_musculus
ENSSMAG00000003607	hnrnpub	77	53.021	MGP_PahariEiJ_G0028193	Hnrnpu	69	61.239	Mus_pahari
ENSSMAG00000003607	hnrnpub	77	54.255	MGP_SPRETEiJ_G0015761	Hnrnpu	69	61.593	Mus_spretus
ENSSMAG00000003607	hnrnpub	84	68.627	ENSMLUG00000000475	HNRNPU	81	68.627	Myotis_lucifugus
ENSSMAG00000003607	hnrnpub	100	81.926	ENSNBRG00000017855	hnrnpub	100	80.380	Neolamprologus_brichardi
ENSSMAG00000003607	hnrnpub	76	75.510	ENSMEUG00000000541	HNRNPU	73	75.510	Notamacropus_eugenii
ENSSMAG00000003607	hnrnpub	100	78.359	ENSONIG00000001260	hnrnpub	96	85.652	Oreochromis_niloticus
ENSSMAG00000003607	hnrnpub	82	70.588	ENSOCUG00000014469	HNRNPU	70	70.588	Oryctolagus_cuniculus
ENSSMAG00000003607	hnrnpub	100	79.429	ENSORLG00000016114	hnrnpub	85	86.792	Oryzias_latipes
ENSSMAG00000003607	hnrnpub	100	79.310	ENSORLG00020005363	hnrnpub	85	87.083	Oryzias_latipes_hni
ENSSMAG00000003607	hnrnpub	100	79.429	ENSORLG00015001190	hnrnpub	85	86.938	Oryzias_latipes_hsok
ENSSMAG00000003607	hnrnpub	82	86.502	ENSOMEG00000014951	hnrnpub	86	87.246	Oryzias_melastigma
ENSSMAG00000003607	hnrnpub	99	51.954	ENSOGAG00000014024	HNRNPU	69	61.661	Otolemur_garnettii
ENSSMAG00000003607	hnrnpub	83	70.588	ENSOARG00000004985	HNRNPU	79	70.588	Ovis_aries
ENSSMAG00000003607	hnrnpub	83	70.588	ENSPPAG00000038652	HNRNPU	73	70.588	Pan_paniscus
ENSSMAG00000003607	hnrnpub	80	57.440	ENSPPRG00000002662	HNRNPU	73	70.588	Panthera_pardus
ENSSMAG00000003607	hnrnpub	83	70.588	ENSPTRG00000002182	HNRNPU	73	70.588	Pan_troglodytes
ENSSMAG00000003607	hnrnpub	77	57.669	ENSPANG00000011643	HNRNPU	76	61.702	Papio_anubis
ENSSMAG00000003607	hnrnpub	100	65.882	ENSPKIG00000022332	hnrnpub	82	68.986	Paramormyrops_kingsleyae
ENSSMAG00000003607	hnrnpub	100	65.877	ENSPKIG00000006885	hnrnpua	81	67.536	Paramormyrops_kingsleyae
ENSSMAG00000003607	hnrnpub	83	75.510	ENSPCIG00000008657	HNRNPU	72	75.510	Phascolarctos_cinereus
ENSSMAG00000003607	hnrnpub	100	78.040	ENSPFOG00000002908	hnrnpub	85	84.582	Poecilia_formosa
ENSSMAG00000003607	hnrnpub	100	77.568	ENSPLAG00000004160	hnrnpub	85	84.438	Poecilia_latipinna
ENSSMAG00000003607	hnrnpub	77	55.982	ENSPCOG00000003883	-	71	60.141	Propithecus_coquereli
ENSSMAG00000003607	hnrnpub	99	52.364	ENSPCOG00000018655	-	74	70.588	Propithecus_coquereli
ENSSMAG00000003607	hnrnpub	77	57.975	ENSPVAG00000002581	HNRNPU	73	70.588	Pteropus_vampyrus
ENSSMAG00000003607	hnrnpub	100	82.283	ENSPNYG00000021642	hnrnpub	100	80.737	Pundamilia_nyererei
ENSSMAG00000003607	hnrnpub	100	64.385	ENSPNAG00000001055	hnrnpub	83	68.931	Pygocentrus_nattereri
ENSSMAG00000003607	hnrnpub	77	54.255	ENSRNOG00000033790	Hnrnpu	69	61.770	Rattus_norvegicus
ENSSMAG00000003607	hnrnpub	77	57.055	ENSRBIG00000031519	HNRNPU	76	60.993	Rhinopithecus_bieti
ENSSMAG00000003607	hnrnpub	79	56.994	ENSRROG00000041642	HNRNPU	76	61.770	Rhinopithecus_roxellana
ENSSMAG00000003607	hnrnpub	100	66.824	ENSSFOG00015001124	hnrnpub	82	70.392	Scleropages_formosus
ENSSMAG00000003607	hnrnpub	100	64.976	ENSSFOG00015019004	hnrnpu	80	70.936	Scleropages_formosus
ENSSMAG00000003607	hnrnpub	100	85.934	ENSSDUG00000005912	hnrnpub	100	88.180	Seriola_dumerili
ENSSMAG00000003607	hnrnpub	100	86.611	ENSSLDG00000004899	hnrnpub	100	88.507	Seriola_lalandi_dorsalis
ENSSMAG00000003607	hnrnpub	79	55.523	ENSSPUG00000011393	HNRNPU	68	62.148	Sphenodon_punctatus
ENSSMAG00000003607	hnrnpub	82	92.319	ENSSPAG00000011853	hnrnpub	85	91.594	Stegastes_partitus
ENSSMAG00000003607	hnrnpub	86	57.975	ENSSSCG00000010877	HNRNPU	73	70.588	Sus_scrofa
ENSSMAG00000003607	hnrnpub	100	79.905	ENSTRUG00000007759	hnrnpub	100	78.121	Takifugu_rubripes
ENSSMAG00000003607	hnrnpub	100	73.460	ENSTNIG00000009725	hnrnpub	99	80.057	Tetraodon_nigroviridis
ENSSMAG00000003607	hnrnpub	83	70.588	ENSUAMG00000021120	HNRNPU	73	70.588	Ursus_americanus
ENSSMAG00000003607	hnrnpub	100	50.397	ENSUMAG00000012322	HNRNPU	82	63.462	Ursus_maritimus
ENSSMAG00000003607	hnrnpub	77	70.588	ENSVPAG00000010520	HNRNPU	76	70.588	Vicugna_pacos
ENSSMAG00000003607	hnrnpub	77	57.975	ENSVVUG00000026524	HNRNPU	73	61.213	Vulpes_vulpes
ENSSMAG00000003607	hnrnpub	99	48.970	ENSXETG00000011386	hnrnpu	77	51.669	Xenopus_tropicalis
ENSSMAG00000003607	hnrnpub	100	77.594	ENSXMAG00000010356	hnrnpub	85	84.582	Xiphophorus_maculatus