EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000003721 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3716 bases
Position: chr8:17269198-17272913
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000006047	EXOSC1	PF10447.9	1.7e-15	1	1
ENSSMAP00000006061	ECR1_N	PF14382.6	2.1e-11	1	1
ENSSMAP00000006047	ECR1_N	PF14382.6	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000006140	-	465	-	ENSSMAP00000006061	154 (aa)	-	-
ENSSMAT00000006125	-	689	-	ENSSMAP00000006047	194 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000003721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000003721	exosc1	98	80.628	ENSG00000171311	EXOSC1	98	80.628	Homo_sapiens
ENSSMAG00000003721	exosc1	100	98.454	ENSAPOG00000007822	exosc1	100	98.454	Acanthochromis_polyacanthus
ENSSMAG00000003721	exosc1	98	81.152	ENSAMEG00000000129	EXOSC1	98	81.152	Ailuropoda_melanoleuca
ENSSMAG00000003721	exosc1	95	97.297	ENSACIG00000018956	exosc1	91	97.297	Amphilophus_citrinellus
ENSSMAG00000003721	exosc1	100	98.969	ENSAOCG00000010699	exosc1	100	98.969	Amphiprion_ocellaris
ENSSMAG00000003721	exosc1	93	87.222	ENSAPEG00000012690	exosc1	97	87.222	Amphiprion_percula
ENSSMAG00000003721	exosc1	100	98.701	ENSATEG00000018683	exosc1	100	98.701	Anabas_testudineus
ENSSMAG00000003721	exosc1	96	78.075	ENSACAG00000002101	EXOSC1	96	78.075	Anolis_carolinensis
ENSSMAG00000003721	exosc1	98	80.628	ENSANAG00000034669	EXOSC1	98	80.628	Aotus_nancymaae
ENSSMAG00000003721	exosc1	100	97.938	ENSACLG00000021243	exosc1	100	97.938	Astatotilapia_calliptera
ENSSMAG00000003721	exosc1	100	94.330	ENSAMXG00000011116	exosc1	100	94.330	Astyanax_mexicanus
ENSSMAG00000003721	exosc1	98	81.152	ENSBTAG00000012699	EXOSC1	98	81.152	Bos_taurus
ENSSMAG00000003721	exosc1	94	36.126	WBGene00012966	exos-1	92	36.126	Caenorhabditis_elegans
ENSSMAG00000003721	exosc1	98	80.105	ENSCJAG00000016586	EXOSC1	98	80.105	Callithrix_jacchus
ENSSMAG00000003721	exosc1	98	80.628	ENSCAFG00000009068	EXOSC1	92	80.628	Canis_familiaris
ENSSMAG00000003721	exosc1	98	80.628	ENSCAFG00020006002	EXOSC1	92	80.628	Canis_lupus_dingo
ENSSMAG00000003721	exosc1	98	81.152	ENSCHIG00000015253	EXOSC1	98	81.152	Capra_hircus
ENSSMAG00000003721	exosc1	98	79.581	ENSTSYG00000000760	EXOSC1	98	79.581	Carlito_syrichta
ENSSMAG00000003721	exosc1	98	80.628	ENSCPOG00000001173	EXOSC1	98	80.628	Cavia_porcellus
ENSSMAG00000003721	exosc1	98	43.005	ENSCCAG00000023986	EXOSC1	98	43.005	Cebus_capucinus
ENSSMAG00000003721	exosc1	98	80.628	ENSCATG00000034114	EXOSC1	98	80.628	Cercocebus_atys
ENSSMAG00000003721	exosc1	98	80.628	ENSCLAG00000002463	EXOSC1	98	80.628	Chinchilla_lanigera
ENSSMAG00000003721	exosc1	98	80.105	ENSCSAG00000005870	EXOSC1	98	80.105	Chlorocebus_sabaeus
ENSSMAG00000003721	exosc1	95	67.935	ENSCHOG00000006477	EXOSC1	98	67.935	Choloepus_hoffmanni
ENSSMAG00000003721	exosc1	55	68.224	ENSCPBG00000011949	EXOSC1	88	68.224	Chrysemys_picta_bellii
ENSSMAG00000003721	exosc1	99	51.295	ENSCING00000022734	-	92	51.295	Ciona_intestinalis
ENSSMAG00000003721	exosc1	99	53.886	ENSCSAVG00000010865	-	98	53.886	Ciona_savignyi
ENSSMAG00000003721	exosc1	98	80.628	ENSCANG00000034159	EXOSC1	98	80.628	Colobus_angolensis_palliatus
ENSSMAG00000003721	exosc1	98	79.581	ENSCGRG00001000335	Exosc1	98	79.581	Cricetulus_griseus_chok1gshd
ENSSMAG00000003721	exosc1	98	79.581	ENSCGRG00000011602	Exosc1	98	79.581	Cricetulus_griseus_crigri
ENSSMAG00000003721	exosc1	100	83.505	ENSCSEG00000007895	exosc1	97	83.505	Cynoglossus_semilaevis
ENSSMAG00000003721	exosc1	100	88.660	ENSCVAG00000016748	exosc1	100	88.660	Cyprinodon_variegatus
ENSSMAG00000003721	exosc1	100	94.330	ENSDARG00000059841	exosc1	100	94.330	Danio_rerio
ENSSMAG00000003721	exosc1	74	77.241	ENSDNOG00000007983	EXOSC1	98	77.241	Dasypus_novemcinctus
ENSSMAG00000003721	exosc1	98	80.105	ENSDORG00000016528	Exosc1	98	80.105	Dipodomys_ordii
ENSSMAG00000003721	exosc1	95	47.895	FBgn0032346	Csl4	92	47.895	Drosophila_melanogaster
ENSSMAG00000003721	exosc1	98	79.058	ENSETEG00000002469	-	98	79.058	Echinops_telfairi
ENSSMAG00000003721	exosc1	97	65.625	ENSEBUG00000008164	exosc1	96	65.625	Eptatretus_burgeri
ENSSMAG00000003721	exosc1	98	71.728	ENSEASG00005008684	EXOSC1	98	71.728	Equus_asinus_asinus
ENSSMAG00000003721	exosc1	60	56.897	ENSECAG00000010621	EXOSC1	69	56.897	Equus_caballus
ENSSMAG00000003721	exosc1	98	79.581	ENSEEUG00000005647	EXOSC1	98	79.581	Erinaceus_europaeus
ENSSMAG00000003721	exosc1	99	90.863	ENSELUG00000017369	exosc1	87	90.863	Esox_lucius
ENSSMAG00000003721	exosc1	98	81.152	ENSFCAG00000040563	EXOSC1	92	81.152	Felis_catus
ENSSMAG00000003721	exosc1	98	78.010	ENSFALG00000008450	EXOSC1	98	78.010	Ficedula_albicollis
ENSSMAG00000003721	exosc1	98	81.152	ENSFDAG00000000846	EXOSC1	98	81.152	Fukomys_damarensis
ENSSMAG00000003721	exosc1	100	88.144	ENSFHEG00000009154	exosc1	100	88.144	Fundulus_heteroclitus
ENSSMAG00000003721	exosc1	100	96.392	ENSGMOG00000008993	exosc1	100	96.392	Gadus_morhua
ENSSMAG00000003721	exosc1	98	65.445	ENSGALG00000039917	EXOSC1	99	84.138	Gallus_gallus
ENSSMAG00000003721	exosc1	100	88.660	ENSGAFG00000010265	exosc1	95	88.660	Gambusia_affinis
ENSSMAG00000003721	exosc1	100	94.845	ENSGACG00000018936	exosc1	100	94.845	Gasterosteus_aculeatus
ENSSMAG00000003721	exosc1	98	78.010	ENSGAGG00000019192	EXOSC1	98	78.010	Gopherus_agassizii
ENSSMAG00000003721	exosc1	98	69.634	ENSGGOG00000003099	EXOSC1	98	69.634	Gorilla_gorilla
ENSSMAG00000003721	exosc1	100	97.938	ENSHBUG00000017857	exosc1	100	97.938	Haplochromis_burtoni
ENSSMAG00000003721	exosc1	98	80.628	ENSHGLG00000016927	EXOSC1	98	80.628	Heterocephalus_glaber_female
ENSSMAG00000003721	exosc1	98	80.628	ENSHGLG00100012208	EXOSC1	98	80.628	Heterocephalus_glaber_male
ENSSMAG00000003721	exosc1	100	96.907	ENSHCOG00000019882	exosc1	100	96.907	Hippocampus_comes
ENSSMAG00000003721	exosc1	100	92.268	ENSIPUG00000007685	exosc1	100	92.268	Ictalurus_punctatus
ENSSMAG00000003721	exosc1	61	63.866	ENSSTOG00000029860	-	91	63.866	Ictidomys_tridecemlineatus
ENSSMAG00000003721	exosc1	98	80.105	ENSSTOG00000006615	EXOSC1	98	80.105	Ictidomys_tridecemlineatus
ENSSMAG00000003721	exosc1	98	80.628	ENSJJAG00000013311	Exosc1	98	80.628	Jaculus_jaculus
ENSSMAG00000003721	exosc1	100	93.814	ENSKMAG00000001202	exosc1	82	93.814	Kryptolebias_marmoratus
ENSSMAG00000003721	exosc1	100	97.938	ENSLBEG00000011448	exosc1	100	97.938	Labrus_bergylta
ENSSMAG00000003721	exosc1	99	82.390	ENSLOCG00000003776	exosc1	100	82.390	Lepisosteus_oculatus
ENSSMAG00000003721	exosc1	98	80.628	ENSLAFG00000015983	EXOSC1	98	80.628	Loxodonta_africana
ENSSMAG00000003721	exosc1	98	80.628	ENSMFAG00000001493	EXOSC1	98	80.628	Macaca_fascicularis
ENSSMAG00000003721	exosc1	98	80.628	ENSMMUG00000020028	EXOSC1	97	78.667	Macaca_mulatta
ENSSMAG00000003721	exosc1	98	80.628	ENSMNEG00000029816	EXOSC1	98	80.628	Macaca_nemestrina
ENSSMAG00000003721	exosc1	97	78.667	ENSMLEG00000027643	EXOSC1	97	78.667	Mandrillus_leucophaeus
ENSSMAG00000003721	exosc1	100	97.423	ENSMAMG00000012200	exosc1	100	97.423	Mastacembelus_armatus
ENSSMAG00000003721	exosc1	100	97.938	ENSMZEG00005007042	exosc1	100	97.938	Maylandia_zebra
ENSSMAG00000003721	exosc1	98	69.634	ENSMAUG00000020462	-	98	69.634	Mesocricetus_auratus
ENSSMAG00000003721	exosc1	98	80.628	ENSMICG00000007664	EXOSC1	97	78.000	Microcebus_murinus
ENSSMAG00000003721	exosc1	98	79.581	ENSMOCG00000006004	-	98	79.581	Microtus_ochrogaster
ENSSMAG00000003721	exosc1	97	75.132	ENSMOCG00000017124	-	96	75.132	Microtus_ochrogaster
ENSSMAG00000003721	exosc1	99	92.157	ENSMMOG00000021403	exosc1	100	92.157	Mola_mola
ENSSMAG00000003721	exosc1	98	81.771	ENSMODG00000004213	EXOSC1	98	81.771	Monodelphis_domestica
ENSSMAG00000003721	exosc1	95	97.297	ENSMALG00000007061	exosc1	93	97.297	Monopterus_albus
ENSSMAG00000003721	exosc1	98	79.058	MGP_CAROLIEiJ_G0022959	Exosc1	98	79.058	Mus_caroli
ENSSMAG00000003721	exosc1	98	79.058	ENSMUSG00000034321	Exosc1	98	79.058	Mus_musculus
ENSSMAG00000003721	exosc1	98	79.581	MGP_PahariEiJ_G0014449	Exosc1	98	79.581	Mus_pahari
ENSSMAG00000003721	exosc1	98	79.058	MGP_SPRETEiJ_G0023880	Exosc1	98	79.058	Mus_spretus
ENSSMAG00000003721	exosc1	98	81.152	ENSMPUG00000017044	EXOSC1	98	81.152	Mustela_putorius_furo
ENSSMAG00000003721	exosc1	98	80.628	ENSMLUG00000009228	EXOSC1	98	80.628	Myotis_lucifugus
ENSSMAG00000003721	exosc1	98	78.010	ENSNGAG00000022033	Exosc1	98	78.010	Nannospalax_galili
ENSSMAG00000003721	exosc1	100	97.403	ENSNBRG00000024007	exosc1	100	97.403	Neolamprologus_brichardi
ENSSMAG00000003721	exosc1	98	80.105	ENSNLEG00000013872	EXOSC1	98	80.105	Nomascus_leucogenys
ENSSMAG00000003721	exosc1	58	73.214	ENSMEUG00000002246	EXOSC1	97	73.214	Notamacropus_eugenii
ENSSMAG00000003721	exosc1	98	80.105	ENSOPRG00000005065	EXOSC1	98	80.105	Ochotona_princeps
ENSSMAG00000003721	exosc1	98	81.152	ENSODEG00000016709	EXOSC1	98	81.152	Octodon_degus
ENSSMAG00000003721	exosc1	100	97.938	ENSONIG00000017683	exosc1	99	97.938	Oreochromis_niloticus
ENSSMAG00000003721	exosc1	59	91.228	ENSOANG00000006563	EXOSC1	98	87.805	Ornithorhynchus_anatinus
ENSSMAG00000003721	exosc1	98	79.167	ENSOCUG00000011898	-	98	79.167	Oryctolagus_cuniculus
ENSSMAG00000003721	exosc1	98	74.869	ENSOCUG00000026461	-	98	74.869	Oryctolagus_cuniculus
ENSSMAG00000003721	exosc1	100	91.795	ENSORLG00000011595	exosc1	100	91.795	Oryzias_latipes
ENSSMAG00000003721	exosc1	100	91.795	ENSORLG00020005831	exosc1	100	91.795	Oryzias_latipes_hni
ENSSMAG00000003721	exosc1	100	91.282	ENSORLG00015004317	exosc1	100	91.282	Oryzias_latipes_hsok
ENSSMAG00000003721	exosc1	100	79.661	ENSOMEG00000013907	exosc1	100	79.661	Oryzias_melastigma
ENSSMAG00000003721	exosc1	98	80.105	ENSOGAG00000016259	EXOSC1	98	80.105	Otolemur_garnettii
ENSSMAG00000003721	exosc1	98	80.628	ENSOARG00000010136	EXOSC1	98	80.628	Ovis_aries
ENSSMAG00000003721	exosc1	97	78.667	ENSPPAG00000039842	EXOSC1	97	78.667	Pan_paniscus
ENSSMAG00000003721	exosc1	98	81.152	ENSPPRG00000023366	EXOSC1	98	81.152	Panthera_pardus
ENSSMAG00000003721	exosc1	98	81.152	ENSPTIG00000017701	EXOSC1	98	81.152	Panthera_tigris_altaica
ENSSMAG00000003721	exosc1	98	80.628	ENSPTRG00000002808	EXOSC1	98	80.628	Pan_troglodytes
ENSSMAG00000003721	exosc1	98	80.628	ENSPANG00000021324	EXOSC1	98	80.628	Papio_anubis
ENSSMAG00000003721	exosc1	100	92.268	ENSPKIG00000016037	exosc1	100	92.268	Paramormyrops_kingsleyae
ENSSMAG00000003721	exosc1	91	65.789	ENSPSIG00000013571	EXOSC1	98	80.165	Pelodiscus_sinensis
ENSSMAG00000003721	exosc1	100	83.505	ENSPMGG00000014002	exosc1	100	83.505	Periophthalmus_magnuspinnatus
ENSSMAG00000003721	exosc1	98	79.581	ENSPEMG00000010710	-	98	79.581	Peromyscus_maniculatus_bairdii
ENSSMAG00000003721	exosc1	95	69.892	ENSPMAG00000000195	exosc1	95	69.892	Petromyzon_marinus
ENSSMAG00000003721	exosc1	98	80.628	ENSPCIG00000002210	EXOSC1	97	80.628	Phascolarctos_cinereus
ENSSMAG00000003721	exosc1	100	87.629	ENSPFOG00000006755	exosc1	95	87.629	Poecilia_formosa
ENSSMAG00000003721	exosc1	100	87.629	ENSPLAG00000005880	exosc1	100	87.629	Poecilia_latipinna
ENSSMAG00000003721	exosc1	100	87.629	ENSPMEG00000015598	exosc1	95	87.629	Poecilia_mexicana
ENSSMAG00000003721	exosc1	100	75.773	ENSPREG00000000405	exosc1	94	75.773	Poecilia_reticulata
ENSSMAG00000003721	exosc1	98	80.628	ENSPPYG00000002531	EXOSC1	98	80.628	Pongo_abelii
ENSSMAG00000003721	exosc1	98	79.581	ENSPCAG00000009135	EXOSC1	98	79.581	Procavia_capensis
ENSSMAG00000003721	exosc1	98	74.346	ENSPCOG00000027539	EXOSC1	98	74.346	Propithecus_coquereli
ENSSMAG00000003721	exosc1	98	80.628	ENSPVAG00000003372	EXOSC1	98	80.628	Pteropus_vampyrus
ENSSMAG00000003721	exosc1	100	97.938	ENSPNYG00000021745	exosc1	100	97.938	Pundamilia_nyererei
ENSSMAG00000003721	exosc1	100	93.299	ENSPNAG00000001944	exosc1	100	93.299	Pygocentrus_nattereri
ENSSMAG00000003721	exosc1	98	79.581	ENSRNOG00000048708	Exosc1	98	79.581	Rattus_norvegicus
ENSSMAG00000003721	exosc1	98	80.628	ENSRBIG00000035618	EXOSC1	98	80.628	Rhinopithecus_bieti
ENSSMAG00000003721	exosc1	98	80.628	ENSRROG00000032589	EXOSC1	97	78.667	Rhinopithecus_roxellana
ENSSMAG00000003721	exosc1	64	37.500	YNL232W	CSL4	54	37.500	Saccharomyces_cerevisiae
ENSSMAG00000003721	exosc1	98	80.628	ENSSBOG00000000359	EXOSC1	98	80.628	Saimiri_boliviensis_boliviensis
ENSSMAG00000003721	exosc1	75	89.726	ENSSHAG00000018219	EXOSC1	99	89.726	Sarcophilus_harrisii
ENSSMAG00000003721	exosc1	100	89.175	ENSSFOG00015016289	-	100	89.175	Scleropages_formosus
ENSSMAG00000003721	exosc1	100	91.753	ENSSFOG00015009069	exosc1	100	91.753	Scleropages_formosus
ENSSMAG00000003721	exosc1	100	98.454	ENSSDUG00000002993	exosc1	100	98.454	Seriola_dumerili
ENSSMAG00000003721	exosc1	100	98.454	ENSSLDG00000025181	exosc1	100	98.454	Seriola_lalandi_dorsalis
ENSSMAG00000003721	exosc1	98	69.110	ENSSARG00000000162	EXOSC1	98	69.110	Sorex_araneus
ENSSMAG00000003721	exosc1	98	75.916	ENSSPUG00000012263	EXOSC1	98	75.916	Sphenodon_punctatus
ENSSMAG00000003721	exosc1	100	89.691	ENSSPAG00000016792	exosc1	83	89.691	Stegastes_partitus
ENSSMAG00000003721	exosc1	98	80.105	ENSSSCG00000010518	EXOSC1	89	80.105	Sus_scrofa
ENSSMAG00000003721	exosc1	98	77.487	ENSTGUG00000009692	EXOSC1	98	77.487	Taeniopygia_guttata
ENSSMAG00000003721	exosc1	98	82.105	ENSTRUG00000007706	exosc1	98	82.105	Takifugu_rubripes
ENSSMAG00000003721	exosc1	98	81.865	ENSTNIG00000014079	exosc1	97	81.865	Tetraodon_nigroviridis
ENSSMAG00000003721	exosc1	98	74.869	ENSTBEG00000006011	EXOSC1	98	74.869	Tupaia_belangeri
ENSSMAG00000003721	exosc1	94	82.514	ENSTTRG00000009887	EXOSC1	99	82.514	Tursiops_truncatus
ENSSMAG00000003721	exosc1	98	67.614	ENSUAMG00000010266	EXOSC1	98	67.614	Ursus_americanus
ENSSMAG00000003721	exosc1	98	67.614	ENSUMAG00000022002	EXOSC1	98	67.614	Ursus_maritimus
ENSSMAG00000003721	exosc1	98	80.628	ENSVVUG00000023192	EXOSC1	62	80.628	Vulpes_vulpes
ENSSMAG00000003721	exosc1	99	77.202	ENSXETG00000003434	exosc1	99	77.202	Xenopus_tropicalis
ENSSMAG00000003721	exosc1	62	89.256	ENSXCOG00000014499	exosc1	93	89.256	Xiphophorus_couchianus
ENSSMAG00000003721	exosc1	100	76.289	ENSXMAG00000023382	exosc1	94	76.289	Xiphophorus_maculatus