EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000003754 (Gene tree)
Gene ID: -
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4122 bases
Position: chr16:9805017-9809138
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000006133	zf-C2H2	PF00096.26	9.6e-11	1	2
ENSSMAP00000006133	zf-C2H2	PF00096.26	9.6e-11	2	2
ENSSMAP00000006133	zf-met	PF12874.7	9.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000006212	-	2225	-	ENSSMAP00000006133	389 (aa)	-	A0A2U9CFF1

Gene Model

Click here to download ENSSMAG00000003754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000003754	prdm12b	68	42.105	ENSSMAG00000018844	prdm5	93	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000003754	prdm12b	90	79.772	ENSG00000130711	PRDM12	99	73.469	Homo_sapiens
ENSSMAG00000003754	prdm12b	100	66.067	ENSAPOG00000018234	-	100	65.553	Acanthochromis_polyacanthus
ENSSMAG00000003754	prdm12b	100	88.520	ENSAPOG00000016051	prdm12b	100	89.203	Acanthochromis_polyacanthus
ENSSMAG00000003754	prdm12b	89	78.613	ENSAMEG00000016234	PRDM12	99	78.324	Ailuropoda_melanoleuca
ENSSMAG00000003754	prdm12b	100	76.309	ENSACIG00000005193	-	100	75.250	Amphilophus_citrinellus
ENSSMAG00000003754	prdm12b	100	87.918	ENSACIG00000019578	prdm12b	100	87.661	Amphilophus_citrinellus
ENSSMAG00000003754	prdm12b	100	86.735	ENSAOCG00000015040	prdm12b	100	87.404	Amphiprion_ocellaris
ENSSMAG00000003754	prdm12b	100	70.000	ENSAPEG00000022849	-	99	70.720	Amphiprion_percula
ENSSMAG00000003754	prdm12b	100	86.224	ENSAPEG00000015092	prdm12b	100	86.889	Amphiprion_percula
ENSSMAG00000003754	prdm12b	100	79.397	ENSATEG00000014595	-	100	78.827	Anabas_testudineus
ENSSMAG00000003754	prdm12b	93	77.901	ENSANAG00000020616	PRDM12	96	79.096	Aotus_nancymaae
ENSSMAG00000003754	prdm12b	100	84.319	ENSACLG00000011876	prdm12b	100	84.062	Astatotilapia_calliptera
ENSSMAG00000003754	prdm12b	100	73.430	ENSACLG00000007631	-	100	73.710	Astatotilapia_calliptera
ENSSMAG00000003754	prdm12b	100	79.177	ENSAMXG00000033665	prdm12b	100	78.406	Astyanax_mexicanus
ENSSMAG00000003754	prdm12b	100	79.012	ENSAMXG00000008540	PRDM12	100	77.037	Astyanax_mexicanus
ENSSMAG00000003754	prdm12b	90	80.627	ENSBTAG00000023797	PRDM12	99	74.550	Bos_taurus
ENSSMAG00000003754	prdm12b	90	79.772	ENSCJAG00000020540	PRDM12	99	73.469	Callithrix_jacchus
ENSSMAG00000003754	prdm12b	79	79.935	ENSCAFG00000023076	PRDM12	99	73.199	Canis_familiaris
ENSSMAG00000003754	prdm12b	90	80.342	ENSCAFG00020024046	PRDM12	99	74.293	Canis_lupus_dingo
ENSSMAG00000003754	prdm12b	90	80.342	ENSCHIG00000025005	PRDM12	99	74.036	Capra_hircus
ENSSMAG00000003754	prdm12b	86	79.701	ENSCPOG00000005901	PRDM12	95	79.403	Cavia_porcellus
ENSSMAG00000003754	prdm12b	90	79.772	ENSCCAG00000037485	PRDM12	99	73.469	Cebus_capucinus
ENSSMAG00000003754	prdm12b	90	79.772	ENSCATG00000020327	PRDM12	99	73.469	Cercocebus_atys
ENSSMAG00000003754	prdm12b	90	79.487	ENSCLAG00000005499	PRDM12	90	79.202	Chinchilla_lanigera
ENSSMAG00000003754	prdm12b	90	79.772	ENSCSAG00000014756	PRDM12	99	73.724	Chlorocebus_sabaeus
ENSSMAG00000003754	prdm12b	100	75.835	ENSCPBG00000022628	PRDM12	99	75.064	Chrysemys_picta_bellii
ENSSMAG00000003754	prdm12b	90	80.627	ENSCGRG00001015005	Prdm12	99	74.807	Cricetulus_griseus_chok1gshd
ENSSMAG00000003754	prdm12b	100	78.304	ENSCVAG00000000944	-	100	77.975	Cyprinodon_variegatus
ENSSMAG00000003754	prdm12b	100	86.632	ENSCVAG00000017166	prdm12b	100	86.889	Cyprinodon_variegatus
ENSSMAG00000003754	prdm12b	100	80.256	ENSDARG00000007430	prdm12b	100	79.692	Danio_rerio
ENSSMAG00000003754	prdm12b	90	80.114	ENSDNOG00000042302	PRDM12	99	73.846	Dasypus_novemcinctus
ENSSMAG00000003754	prdm12b	94	61.155	ENSEBUG00000016780	prdm12b	74	66.568	Eptatretus_burgeri
ENSSMAG00000003754	prdm12b	90	80.342	ENSEASG00005008472	PRDM12	99	74.036	Equus_asinus_asinus
ENSSMAG00000003754	prdm12b	90	80.342	ENSECAG00000005933	PRDM12	99	74.036	Equus_caballus
ENSSMAG00000003754	prdm12b	100	78.827	ENSELUG00000009905	prdm12b	100	77.635	Esox_lucius
ENSSMAG00000003754	prdm12b	100	82.262	ENSELUG00000013674	PRDM12	100	81.234	Esox_lucius
ENSSMAG00000003754	prdm12b	90	80.342	ENSFCAG00000043086	PRDM12	99	74.036	Felis_catus
ENSSMAG00000003754	prdm12b	100	75.835	ENSFALG00000001445	PRDM12	89	75.321	Ficedula_albicollis
ENSSMAG00000003754	prdm12b	100	85.422	ENSFHEG00000003944	prdm12b	100	85.897	Fundulus_heteroclitus
ENSSMAG00000003754	prdm12b	100	73.366	ENSFHEG00000007746	-	100	72.236	Fundulus_heteroclitus
ENSSMAG00000003754	prdm12b	95	83.777	ENSGMOG00000011797	prdm12b	93	85.836	Gadus_morhua
ENSSMAG00000003754	prdm12b	100	75.835	ENSGALG00000003895	PRDM12	99	75.321	Gallus_gallus
ENSSMAG00000003754	prdm12b	100	84.848	ENSGAFG00000010827	prdm12b	99	85.385	Gambusia_affinis
ENSSMAG00000003754	prdm12b	100	89.203	ENSGACG00000016713	prdm12b	99	88.432	Gasterosteus_aculeatus
ENSSMAG00000003754	prdm12b	100	76.093	ENSGAGG00000014083	PRDM12	99	75.321	Gopherus_agassizii
ENSSMAG00000003754	prdm12b	90	79.487	ENSGGOG00000010568	PRDM12	99	73.469	Gorilla_gorilla
ENSSMAG00000003754	prdm12b	100	87.404	ENSHBUG00000022878	prdm12b	100	87.404	Haplochromis_burtoni
ENSSMAG00000003754	prdm12b	100	73.430	ENSHBUG00000022537	-	93	73.710	Haplochromis_burtoni
ENSSMAG00000003754	prdm12b	90	79.772	ENSHGLG00000013939	PRDM12	90	79.487	Heterocephalus_glaber_female
ENSSMAG00000003754	prdm12b	89	86.932	ENSHCOG00000003663	prdm12b	100	79.851	Hippocampus_comes
ENSSMAG00000003754	prdm12b	100	70.051	ENSHCOG00000021167	-	100	69.289	Hippocampus_comes
ENSSMAG00000003754	prdm12b	100	80.051	ENSIPUG00000017053	prdm12b	100	78.920	Ictalurus_punctatus
ENSSMAG00000003754	prdm12b	100	75.321	ENSIPUG00000019544	PRDM12	100	74.293	Ictalurus_punctatus
ENSSMAG00000003754	prdm12b	94	78.202	ENSSTOG00000005986	PRDM12	86	79.772	Ictidomys_tridecemlineatus
ENSSMAG00000003754	prdm12b	90	80.057	ENSJJAG00000005424	Prdm12	99	79.772	Jaculus_jaculus
ENSSMAG00000003754	prdm12b	100	83.252	ENSKMAG00000016921	prdm12b	100	84.975	Kryptolebias_marmoratus
ENSSMAG00000003754	prdm12b	94	76.152	ENSKMAG00000021205	-	94	75.067	Kryptolebias_marmoratus
ENSSMAG00000003754	prdm12b	100	77.017	ENSLBEG00000007776	-	100	76.276	Labrus_bergylta
ENSSMAG00000003754	prdm12b	100	85.823	ENSLBEG00000017769	prdm12b	100	85.934	Labrus_bergylta
ENSSMAG00000003754	prdm12b	100	76.350	ENSLACG00000017560	PRDM12	99	76.093	Latimeria_chalumnae
ENSSMAG00000003754	prdm12b	100	81.748	ENSLOCG00000005429	prdm12b	100	80.977	Lepisosteus_oculatus
ENSSMAG00000003754	prdm12b	90	79.772	ENSLAFG00000006979	PRDM12	90	78.652	Loxodonta_africana
ENSSMAG00000003754	prdm12b	100	74.036	ENSMFAG00000040322	PRDM12	99	73.469	Macaca_fascicularis
ENSSMAG00000003754	prdm12b	90	79.772	ENSMNEG00000037234	PRDM12	99	73.469	Macaca_nemestrina
ENSSMAG00000003754	prdm12b	100	70.743	ENSMAMG00000018988	-	100	70.976	Mastacembelus_armatus
ENSSMAG00000003754	prdm12b	100	89.717	ENSMAMG00000013212	prdm12b	100	89.203	Mastacembelus_armatus
ENSSMAG00000003754	prdm12b	100	73.077	ENSMZEG00005000415	PRDM12	100	73.350	Maylandia_zebra
ENSSMAG00000003754	prdm12b	95	77.748	ENSMGAG00000005438	PRDM12	91	81.268	Meleagris_gallopavo
ENSSMAG00000003754	prdm12b	100	74.807	ENSMAUG00000013040	Prdm12	99	74.293	Mesocricetus_auratus
ENSSMAG00000003754	prdm12b	90	80.342	ENSMICG00000015480	PRDM12	91	79.772	Microcebus_murinus
ENSSMAG00000003754	prdm12b	95	77.628	ENSMOCG00000021026	Prdm12	90	80.342	Microtus_ochrogaster
ENSSMAG00000003754	prdm12b	100	75.448	ENSMODG00000012108	PRDM12	99	75.448	Monodelphis_domestica
ENSSMAG00000003754	prdm12b	100	74.807	ENSMALG00000021901	prdm12b	99	73.779	Monopterus_albus
ENSSMAG00000003754	prdm12b	90	80.627	MGP_CAROLIEiJ_G0023414	Prdm12	99	74.293	Mus_caroli
ENSSMAG00000003754	prdm12b	90	80.627	ENSMUSG00000079466	Prdm12	99	74.293	Mus_musculus
ENSSMAG00000003754	prdm12b	90	80.627	MGP_PahariEiJ_G0024871	Prdm12	99	74.293	Mus_pahari
ENSSMAG00000003754	prdm12b	90	80.627	MGP_SPRETEiJ_G0024331	Prdm12	99	74.293	Mus_spretus
ENSSMAG00000003754	prdm12b	89	80.980	ENSNGAG00000018480	Prdm12	99	73.522	Nannospalax_galili
ENSSMAG00000003754	prdm12b	100	70.101	ENSNBRG00000024312	-	100	69.521	Neolamprologus_brichardi
ENSSMAG00000003754	prdm12b	100	88.689	ENSNBRG00000006727	prdm12b	100	88.432	Neolamprologus_brichardi
ENSSMAG00000003754	prdm12b	83	86.387	ENSMEUG00000003828	PRDM12	86	86.387	Notamacropus_eugenii
ENSSMAG00000003754	prdm12b	90	80.057	ENSOPRG00000008680	PRDM12	99	79.487	Ochotona_princeps
ENSSMAG00000003754	prdm12b	90	79.772	ENSODEG00000016282	PRDM12	62	79.487	Octodon_degus
ENSSMAG00000003754	prdm12b	65	70.916	ENSOANG00000001043	PRDM12	100	70.120	Ornithorhynchus_anatinus
ENSSMAG00000003754	prdm12b	88	76.246	ENSOCUG00000008241	PRDM12	96	78.882	Oryctolagus_cuniculus
ENSSMAG00000003754	prdm12b	100	87.692	ENSORLG00000007114	prdm12b	99	87.692	Oryzias_latipes
ENSSMAG00000003754	prdm12b	100	74.568	ENSORLG00000017558	-	100	75.188	Oryzias_latipes
ENSSMAG00000003754	prdm12b	100	86.118	ENSORLG00020019565	prdm12b	99	86.923	Oryzias_latipes_hni
ENSSMAG00000003754	prdm12b	100	75.062	ENSORLG00020013167	-	100	75.439	Oryzias_latipes_hni
ENSSMAG00000003754	prdm12b	100	85.604	ENSORLG00015007621	prdm12b	99	87.692	Oryzias_latipes_hsok
ENSSMAG00000003754	prdm12b	100	74.568	ENSORLG00015003435	-	100	75.188	Oryzias_latipes_hsok
ENSSMAG00000003754	prdm12b	100	87.724	ENSOMEG00000004134	prdm12b	99	86.154	Oryzias_melastigma
ENSSMAG00000003754	prdm12b	100	76.826	ENSOMEG00000007762	-	100	76.574	Oryzias_melastigma
ENSSMAG00000003754	prdm12b	90	80.342	ENSOGAG00000007557	PRDM12	98	79.772	Otolemur_garnettii
ENSSMAG00000003754	prdm12b	79	77.994	ENSPPAG00000031506	-	99	76.101	Pan_paniscus
ENSSMAG00000003754	prdm12b	100	69.643	ENSPPRG00000023024	PRDM12	84	73.864	Panthera_pardus
ENSSMAG00000003754	prdm12b	90	79.772	ENSPTRG00000043324	-	99	73.724	Pan_troglodytes
ENSSMAG00000003754	prdm12b	90	79.772	ENSPTRG00000021475	PRDM12	99	73.724	Pan_troglodytes
ENSSMAG00000003754	prdm12b	90	79.772	ENSPANG00000025967	PRDM12	99	73.469	Papio_anubis
ENSSMAG00000003754	prdm12b	100	81.491	ENSPKIG00000007228	prdm12b	100	81.491	Paramormyrops_kingsleyae
ENSSMAG00000003754	prdm12b	89	79.539	ENSPKIG00000004305	PRDM12	94	78.674	Paramormyrops_kingsleyae
ENSSMAG00000003754	prdm12b	100	76.093	ENSPSIG00000006739	PRDM12	99	75.321	Pelodiscus_sinensis
ENSSMAG00000003754	prdm12b	100	85.861	ENSPMGG00000008867	prdm12b	99	85.604	Periophthalmus_magnuspinnatus
ENSSMAG00000003754	prdm12b	100	72.525	ENSPMGG00000002356	-	87	77.809	Periophthalmus_magnuspinnatus
ENSSMAG00000003754	prdm12b	94	78.202	ENSPEMG00000009969	Prdm12	90	80.057	Peromyscus_maniculatus_bairdii
ENSSMAG00000003754	prdm12b	100	75.448	ENSPCIG00000024119	PRDM12	99	75.448	Phascolarctos_cinereus
ENSSMAG00000003754	prdm12b	100	86.957	ENSPFOG00000019841	prdm12b	100	85.166	Poecilia_formosa
ENSSMAG00000003754	prdm12b	100	85.496	ENSPLAG00000016626	prdm12b	99	85.496	Poecilia_latipinna
ENSSMAG00000003754	prdm12b	96	84.416	ENSPMEG00000016698	prdm12b	99	85.488	Poecilia_mexicana
ENSSMAG00000003754	prdm12b	100	86.041	ENSPREG00000015073	prdm12b	99	85.279	Poecilia_reticulata
ENSSMAG00000003754	prdm12b	95	71.504	ENSPREG00000003211	-	94	70.976	Poecilia_reticulata
ENSSMAG00000003754	prdm12b	93	77.901	ENSPPYG00000019694	PRDM12	92	79.714	Pongo_abelii
ENSSMAG00000003754	prdm12b	90	80.342	ENSPCOG00000022255	PRDM12	99	74.550	Propithecus_coquereli
ENSSMAG00000003754	prdm12b	90	80.057	ENSPVAG00000001511	PRDM12	99	74.293	Pteropus_vampyrus
ENSSMAG00000003754	prdm12b	100	87.918	ENSPNYG00000009607	prdm12b	100	87.918	Pundamilia_nyererei
ENSSMAG00000003754	prdm12b	100	73.077	ENSPNYG00000013589	-	100	73.594	Pundamilia_nyererei
ENSSMAG00000003754	prdm12b	100	76.276	ENSPNAG00000013396	PRDM12	100	76.276	Pygocentrus_nattereri
ENSSMAG00000003754	prdm12b	100	79.434	ENSPNAG00000024532	prdm12b	100	78.406	Pygocentrus_nattereri
ENSSMAG00000003754	prdm12b	90	80.627	ENSRNOG00000009218	Prdm12	99	74.293	Rattus_norvegicus
ENSSMAG00000003754	prdm12b	87	80.236	ENSRBIG00000042712	PRDM12	91	77.841	Rhinopithecus_bieti
ENSSMAG00000003754	prdm12b	88	80.466	ENSRROG00000043554	PRDM12	99	79.769	Rhinopithecus_roxellana
ENSSMAG00000003754	prdm12b	100	75.255	ENSSHAG00000015972	PRDM12	99	75.255	Sarcophilus_harrisii
ENSSMAG00000003754	prdm12b	100	79.093	ENSSDUG00000019071	-	100	78.261	Seriola_dumerili
ENSSMAG00000003754	prdm12b	100	90.000	ENSSDUG00000023498	prdm12b	100	89.487	Seriola_dumerili
ENSSMAG00000003754	prdm12b	100	90.513	ENSSLDG00000009557	prdm12b	100	90.000	Seriola_lalandi_dorsalis
ENSSMAG00000003754	prdm12b	100	74.936	ENSSLDG00000013562	-	100	74.425	Seriola_lalandi_dorsalis
ENSSMAG00000003754	prdm12b	100	75.835	ENSSPUG00000013424	PRDM12	99	75.064	Sphenodon_punctatus
ENSSMAG00000003754	prdm12b	100	70.075	ENSSPAG00000022420	-	100	69.674	Stegastes_partitus
ENSSMAG00000003754	prdm12b	100	86.735	ENSSPAG00000018824	prdm12b	100	87.404	Stegastes_partitus
ENSSMAG00000003754	prdm12b	90	80.342	ENSSSCG00000005703	PRDM12	99	74.293	Sus_scrofa
ENSSMAG00000003754	prdm12b	100	74.872	ENSTRUG00000013239	-	100	74.359	Takifugu_rubripes
ENSSMAG00000003754	prdm12b	100	85.604	ENSTRUG00000018659	prdm12b	100	85.090	Takifugu_rubripes
ENSSMAG00000003754	prdm12b	100	85.861	ENSTNIG00000009020	prdm12b	99	85.347	Tetraodon_nigroviridis
ENSSMAG00000003754	prdm12b	100	72.704	ENSTNIG00000005859	-	99	71.429	Tetraodon_nigroviridis
ENSSMAG00000003754	prdm12b	90	80.342	ENSUAMG00000009653	PRDM12	91	79.772	Ursus_americanus
ENSSMAG00000003754	prdm12b	90	80.342	ENSVVUG00000027662	PRDM12	78	79.772	Vulpes_vulpes
ENSSMAG00000003754	prdm12b	100	86.118	ENSXCOG00000002836	prdm12b	99	86.889	Xiphophorus_couchianus
ENSSMAG00000003754	prdm12b	100	86.375	ENSXMAG00000005537	prdm12b	100	87.147	Xiphophorus_maculatus
ENSSMAG00000003754	prdm12b	100	75.122	ENSXMAG00000028012	-	100	74.752	Xiphophorus_maculatus