EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000004047 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10211 bases
Position: chr15:7317311-7327521
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000006694	NUC173	PF08161.12	7.4e-73	1	1
ENSSMAP00000006649	NUC173	PF08161.12	9.3e-73	1	1
ENSSMAP00000006756	NUC173	PF08161.12	6.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000006839	-	3588	-	ENSSMAP00000006756	1195 (aa)	-	-
ENSSMAT00000006729	-	4209	-	ENSSMAP00000006649	1371 (aa)	-	-
ENSSMAT00000006779	-	3957	-	ENSSMAP00000006694	1287 (aa)	-	A0A2U9CBU0

Gene Model

Click here to download ENSSMAG00000004047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004047	rrp12	92	73.684	ENSG00000052749	RRP12	100	75.000	Homo_sapiens
ENSSMAG00000004047	rrp12	99	86.636	ENSAPOG00000013355	rrp12	99	86.271	Acanthochromis_polyacanthus
ENSSMAG00000004047	rrp12	99	61.982	ENSAMEG00000000134	RRP12	99	62.384	Ailuropoda_melanoleuca
ENSSMAG00000004047	rrp12	99	88.906	ENSACIG00000022673	rrp12	99	88.594	Amphilophus_citrinellus
ENSSMAG00000004047	rrp12	99	90.000	ENSAOCG00000016149	rrp12	99	89.922	Amphiprion_ocellaris
ENSSMAG00000004047	rrp12	99	87.928	ENSAPEG00000016023	rrp12	99	87.860	Amphiprion_percula
ENSSMAG00000004047	rrp12	99	89.236	ENSATEG00000022627	rrp12	99	89.080	Anabas_testudineus
ENSSMAG00000004047	rrp12	97	58.917	ENSAPLG00000014387	RRP12	99	59.310	Anas_platyrhynchos
ENSSMAG00000004047	rrp12	99	59.182	ENSACAG00000002175	RRP12	99	59.006	Anolis_carolinensis
ENSSMAG00000004047	rrp12	92	73.684	ENSANAG00000037485	RRP12	99	73.684	Aotus_nancymaae
ENSSMAG00000004047	rrp12	99	87.891	ENSACLG00000007354	rrp12	99	87.891	Astatotilapia_calliptera
ENSSMAG00000004047	rrp12	99	76.242	ENSAMXG00000012852	rrp12	99	75.997	Astyanax_mexicanus
ENSSMAG00000004047	rrp12	99	61.875	ENSBTAG00000002191	RRP12	99	61.890	Bos_taurus
ENSSMAG00000004047	rrp12	85	59.818	ENSCJAG00000016549	-	99	59.927	Callithrix_jacchus
ENSSMAG00000004047	rrp12	99	61.963	ENSCAFG00000009043	RRP12	99	62.181	Canis_familiaris
ENSSMAG00000004047	rrp12	99	61.963	ENSCAFG00020005991	RRP12	99	62.181	Canis_lupus_dingo
ENSSMAG00000004047	rrp12	99	60.046	ENSCHIG00000011876	RRP12	99	59.614	Capra_hircus
ENSSMAG00000004047	rrp12	53	53.372	ENSTSYG00000030210	-	98	54.136	Carlito_syrichta
ENSSMAG00000004047	rrp12	96	56.595	ENSCAPG00000008991	RRP12	97	56.129	Cavia_aperea
ENSSMAG00000004047	rrp12	100	61.941	ENSCPOG00000004215	RRP12	99	61.849	Cavia_porcellus
ENSSMAG00000004047	rrp12	79	65.185	ENSCCAG00000024088	RRP12	98	66.412	Cebus_capucinus
ENSSMAG00000004047	rrp12	70	56.908	ENSCCAG00000033123	-	82	55.973	Cebus_capucinus
ENSSMAG00000004047	rrp12	99	58.263	ENSCATG00000045310	RRP12	99	58.372	Cercocebus_atys
ENSSMAG00000004047	rrp12	100	61.278	ENSCLAG00000003753	RRP12	99	61.335	Chinchilla_lanigera
ENSSMAG00000004047	rrp12	88	60.487	ENSCSAG00000005877	RRP12	99	60.755	Chlorocebus_sabaeus
ENSSMAG00000004047	rrp12	59	69.717	ENSCHOG00000003095	-	57	69.717	Choloepus_hoffmanni
ENSSMAG00000004047	rrp12	94	63.561	ENSCPBG00000011935	RRP12	97	63.485	Chrysemys_picta_bellii
ENSSMAG00000004047	rrp12	63	40.119	ENSCSAVG00000006059	-	99	38.293	Ciona_savignyi
ENSSMAG00000004047	rrp12	92	74.342	ENSCANG00000031653	RRP12	99	74.342	Colobus_angolensis_palliatus
ENSSMAG00000004047	rrp12	90	62.884	ENSCGRG00001004338	Rrp12	99	62.747	Cricetulus_griseus_chok1gshd
ENSSMAG00000004047	rrp12	99	62.471	ENSCGRG00000011965	Rrp12	99	62.345	Cricetulus_griseus_crigri
ENSSMAG00000004047	rrp12	99	87.024	ENSCSEG00000007799	rrp12	99	87.099	Cynoglossus_semilaevis
ENSSMAG00000004047	rrp12	99	85.614	ENSCVAG00000003418	rrp12	99	85.614	Cyprinodon_variegatus
ENSSMAG00000004047	rrp12	99	73.566	ENSDARG00000022410	rrp12	99	73.302	Danio_rerio
ENSSMAG00000004047	rrp12	99	61.758	ENSDNOG00000005120	RRP12	99	61.176	Dasypus_novemcinctus
ENSSMAG00000004047	rrp12	99	62.471	ENSDORG00000009199	Rrp12	99	62.413	Dipodomys_ordii
ENSSMAG00000004047	rrp12	91	71.429	ENSETEG00000002455	RRP12	91	71.429	Echinops_telfairi
ENSSMAG00000004047	rrp12	82	61.333	ENSEBUG00000006555	rrp12	98	74.359	Eptatretus_burgeri
ENSSMAG00000004047	rrp12	99	61.846	ENSEASG00005008693	RRP12	99	62.296	Equus_asinus_asinus
ENSSMAG00000004047	rrp12	94	61.538	ENSECAG00000010892	RRP12	99	62.097	Equus_caballus
ENSSMAG00000004047	rrp12	64	57.941	ENSEEUG00000005447	-	63	57.941	Erinaceus_europaeus
ENSSMAG00000004047	rrp12	99	78.760	ENSELUG00000010510	rrp12	100	77.712	Esox_lucius
ENSSMAG00000004047	rrp12	92	74.342	ENSFCAG00000028639	RRP12	99	62.413	Felis_catus
ENSSMAG00000004047	rrp12	94	62.038	ENSFALG00000008458	RRP12	99	62.469	Ficedula_albicollis
ENSSMAG00000004047	rrp12	99	61.449	ENSFDAG00000019108	RRP12	95	61.383	Fukomys_damarensis
ENSSMAG00000004047	rrp12	99	78.443	ENSFHEG00000004148	rrp12	99	77.605	Fundulus_heteroclitus
ENSSMAG00000004047	rrp12	95	77.472	ENSGMOG00000004188	rrp12	95	74.459	Gadus_morhua
ENSSMAG00000004047	rrp12	99	63.186	ENSGALG00000041331	RRP12	96	63.219	Gallus_gallus
ENSSMAG00000004047	rrp12	99	85.792	ENSGAFG00000009038	rrp12	99	85.469	Gambusia_affinis
ENSSMAG00000004047	rrp12	99	85.000	ENSGACG00000007175	rrp12	99	84.922	Gasterosteus_aculeatus
ENSSMAG00000004047	rrp12	67	66.782	ENSGAGG00000019169	RRP12	96	66.782	Gopherus_agassizii
ENSSMAG00000004047	rrp12	92	73.684	ENSGGOG00000014850	RRP12	99	62.277	Gorilla_gorilla
ENSSMAG00000004047	rrp12	99	88.047	ENSHBUG00000023527	rrp12	99	88.047	Haplochromis_burtoni
ENSSMAG00000004047	rrp12	99	61.556	ENSHGLG00000016772	RRP12	99	61.305	Heterocephalus_glaber_female
ENSSMAG00000004047	rrp12	99	61.556	ENSHGLG00100015110	RRP12	99	61.305	Heterocephalus_glaber_male
ENSSMAG00000004047	rrp12	100	80.683	ENSHCOG00000019519	rrp12	99	80.766	Hippocampus_comes
ENSSMAG00000004047	rrp12	100	74.593	ENSIPUG00000000311	RRP12	97	94.872	Ictalurus_punctatus
ENSSMAG00000004047	rrp12	99	63.020	ENSSTOG00000006515	RRP12	99	62.859	Ictidomys_tridecemlineatus
ENSSMAG00000004047	rrp12	96	61.391	ENSJJAG00000000110	Rrp12	98	61.563	Jaculus_jaculus
ENSSMAG00000004047	rrp12	99	85.904	ENSKMAG00000020621	rrp12	99	85.904	Kryptolebias_marmoratus
ENSSMAG00000004047	rrp12	99	82.609	ENSLBEG00000015335	rrp12	99	82.188	Labrus_bergylta
ENSSMAG00000004047	rrp12	73	65.543	ENSLACG00000016633	RRP12	82	65.543	Latimeria_chalumnae
ENSSMAG00000004047	rrp12	100	70.665	ENSLOCG00000003846	rrp12	99	70.525	Lepisosteus_oculatus
ENSSMAG00000004047	rrp12	99	62.164	ENSLAFG00000015965	RRP12	99	61.717	Loxodonta_africana
ENSSMAG00000004047	rrp12	92	73.684	ENSMFAG00000041558	RRP12	99	73.684	Macaca_fascicularis
ENSSMAG00000004047	rrp12	92	73.684	ENSMMUG00000019634	RRP12	99	73.684	Macaca_mulatta
ENSSMAG00000004047	rrp12	92	73.684	ENSMNEG00000036759	RRP12	99	73.684	Macaca_nemestrina
ENSSMAG00000004047	rrp12	92	74.342	ENSMLEG00000041317	RRP12	99	74.342	Mandrillus_leucophaeus
ENSSMAG00000004047	rrp12	99	86.865	ENSMAMG00000002964	rrp12	99	89.259	Mastacembelus_armatus
ENSSMAG00000004047	rrp12	99	87.969	ENSMZEG00005003241	rrp12	99	87.969	Maylandia_zebra
ENSSMAG00000004047	rrp12	99	60.876	ENSMGAG00000009829	RRP12	99	61.008	Meleagris_gallopavo
ENSSMAG00000004047	rrp12	99	60.185	ENSMAUG00000020743	Rrp12	93	62.785	Mesocricetus_auratus
ENSSMAG00000004047	rrp12	92	76.471	ENSMICG00000007624	RRP12	99	62.868	Microcebus_murinus
ENSSMAG00000004047	rrp12	100	62.462	ENSMOCG00000006753	Rrp12	99	62.452	Microtus_ochrogaster
ENSSMAG00000004047	rrp12	100	84.496	ENSMMOG00000010708	rrp12	99	83.828	Mola_mola
ENSSMAG00000004047	rrp12	99	63.447	ENSMODG00000004315	RRP12	99	62.850	Monodelphis_domestica
ENSSMAG00000004047	rrp12	99	81.958	ENSMALG00000016560	rrp12	99	87.766	Monopterus_albus
ENSSMAG00000004047	rrp12	99	62.395	MGP_CAROLIEiJ_G0022957	Rrp12	99	61.681	Mus_caroli
ENSSMAG00000004047	rrp12	99	62.972	ENSMUSG00000035049	Rrp12	99	62.452	Mus_musculus
ENSSMAG00000004047	rrp12	100	62.923	MGP_PahariEiJ_G0014447	Rrp12	99	62.529	Mus_pahari
ENSSMAG00000004047	rrp12	99	63.125	MGP_SPRETEiJ_G0023878	Rrp12	99	62.684	Mus_spretus
ENSSMAG00000004047	rrp12	99	61.538	ENSMPUG00000017046	RRP12	99	61.872	Mustela_putorius_furo
ENSSMAG00000004047	rrp12	99	61.887	ENSMLUG00000017160	RRP12	99	62.056	Myotis_lucifugus
ENSSMAG00000004047	rrp12	99	62.741	ENSNGAG00000024144	Rrp12	99	62.665	Nannospalax_galili
ENSSMAG00000004047	rrp12	99	86.094	ENSNBRG00000009987	rrp12	99	85.703	Neolamprologus_brichardi
ENSSMAG00000004047	rrp12	99	57.248	ENSNLEG00000013762	RRP12	99	56.675	Nomascus_leucogenys
ENSSMAG00000004047	rrp12	100	57.519	ENSMEUG00000003185	RRP12	99	57.266	Notamacropus_eugenii
ENSSMAG00000004047	rrp12	94	65.890	ENSOPRG00000005001	RRP12	93	65.890	Ochotona_princeps
ENSSMAG00000004047	rrp12	100	61.580	ENSODEG00000016439	RRP12	99	61.012	Octodon_degus
ENSSMAG00000004047	rrp12	99	88.438	ENSONIG00000009528	rrp12	99	88.438	Oreochromis_niloticus
ENSSMAG00000004047	rrp12	100	58.742	ENSOANG00000006560	RRP12	99	58.359	Ornithorhynchus_anatinus
ENSSMAG00000004047	rrp12	99	62.096	ENSOCUG00000005662	RRP12	99	62.238	Oryctolagus_cuniculus
ENSSMAG00000004047	rrp12	99	85.078	ENSORLG00000008688	rrp12	99	85.132	Oryzias_latipes
ENSSMAG00000004047	rrp12	97	85.203	ENSORLG00020002355	rrp12	99	84.805	Oryzias_latipes_hni
ENSSMAG00000004047	rrp12	99	85.312	ENSORLG00015006709	rrp12	99	85.000	Oryzias_latipes_hsok
ENSSMAG00000004047	rrp12	97	85.362	ENSOMEG00000002609	rrp12	99	85.044	Oryzias_melastigma
ENSSMAG00000004047	rrp12	99	61.656	ENSOGAG00000001626	RRP12	99	61.253	Otolemur_garnettii
ENSSMAG00000004047	rrp12	99	61.090	ENSOARG00000009681	RRP12	99	61.098	Ovis_aries
ENSSMAG00000004047	rrp12	92	73.684	ENSPPAG00000043885	RRP12	99	60.341	Pan_paniscus
ENSSMAG00000004047	rrp12	92	73.684	ENSPPRG00000002029	RRP12	99	62.413	Panthera_pardus
ENSSMAG00000004047	rrp12	92	74.342	ENSPTIG00000004428	RRP12	99	59.309	Panthera_tigris_altaica
ENSSMAG00000004047	rrp12	92	73.684	ENSPTRG00000002806	RRP12	99	60.341	Pan_troglodytes
ENSSMAG00000004047	rrp12	92	74.342	ENSPANG00000021360	RRP12	99	74.342	Papio_anubis
ENSSMAG00000004047	rrp12	100	73.056	ENSPKIG00000016516	rrp12	99	73.447	Paramormyrops_kingsleyae
ENSSMAG00000004047	rrp12	99	82.514	ENSPMGG00000020217	rrp12	99	81.967	Periophthalmus_magnuspinnatus
ENSSMAG00000004047	rrp12	100	63.259	ENSPEMG00000008437	Rrp12	99	63.023	Peromyscus_maniculatus_bairdii
ENSSMAG00000004047	rrp12	99	45.557	ENSPMAG00000007493	rrp12	99	45.779	Petromyzon_marinus
ENSSMAG00000004047	rrp12	96	72.819	ENSPCIG00000002157	RRP12	99	62.626	Phascolarctos_cinereus
ENSSMAG00000004047	rrp12	99	85.402	ENSPFOG00000014975	rrp12	99	85.000	Poecilia_formosa
ENSSMAG00000004047	rrp12	99	85.168	ENSPLAG00000009840	rrp12	99	84.766	Poecilia_latipinna
ENSSMAG00000004047	rrp12	99	85.402	ENSPMEG00000021871	rrp12	99	85.000	Poecilia_mexicana
ENSSMAG00000004047	rrp12	99	82.659	ENSPREG00000020950	rrp12	99	82.023	Poecilia_reticulata
ENSSMAG00000004047	rrp12	99	61.982	ENSPPYG00000002528	RRP12	99	61.735	Pongo_abelii
ENSSMAG00000004047	rrp12	94	75.141	ENSPCAG00000008967	RRP12	94	75.141	Procavia_capensis
ENSSMAG00000004047	rrp12	99	62.886	ENSPCOG00000014009	RRP12	99	63.064	Propithecus_coquereli
ENSSMAG00000004047	rrp12	99	59.339	ENSPVAG00000003370	RRP12	99	59.302	Pteropus_vampyrus
ENSSMAG00000004047	rrp12	99	88.359	ENSPNYG00000009451	rrp12	99	88.359	Pundamilia_nyererei
ENSSMAG00000004047	rrp12	100	75.252	ENSPNAG00000007658	rrp12	99	74.804	Pygocentrus_nattereri
ENSSMAG00000004047	rrp12	99	62.789	ENSRNOG00000048495	Rrp12	99	62.578	Rattus_norvegicus
ENSSMAG00000004047	rrp12	92	74.342	ENSRBIG00000021296	RRP12	99	74.342	Rhinopithecus_bieti
ENSSMAG00000004047	rrp12	92	74.342	ENSRROG00000032482	RRP12	99	74.342	Rhinopithecus_roxellana
ENSSMAG00000004047	rrp12	92	73.026	ENSSBOG00000030992	RRP12	99	73.026	Saimiri_boliviensis_boliviensis
ENSSMAG00000004047	rrp12	99	62.461	ENSSHAG00000018275	RRP12	99	62.168	Sarcophilus_harrisii
ENSSMAG00000004047	rrp12	99	76.128	ENSSFOG00015016400	rrp12	99	76.369	Scleropages_formosus
ENSSMAG00000004047	rrp12	99	92.091	ENSSDUG00000022871	rrp12	99	92.091	Seriola_dumerili
ENSSMAG00000004047	rrp12	99	91.934	ENSSLDG00000003038	rrp12	99	91.934	Seriola_lalandi_dorsalis
ENSSMAG00000004047	rrp12	100	60.417	ENSSPUG00000012221	RRP12	99	60.886	Sphenodon_punctatus
ENSSMAG00000004047	rrp12	99	89.375	ENSSPAG00000002261	rrp12	99	89.219	Stegastes_partitus
ENSSMAG00000004047	rrp12	100	61.385	ENSSSCG00000010514	RRP12	99	61.753	Sus_scrofa
ENSSMAG00000004047	rrp12	89	59.599	ENSTGUG00000009711	RRP12	99	59.455	Taeniopygia_guttata
ENSSMAG00000004047	rrp12	100	79.876	ENSTRUG00000012017	rrp12	99	79.248	Takifugu_rubripes
ENSSMAG00000004047	rrp12	100	84.848	ENSTNIG00000016522	rrp12	99	84.965	Tetraodon_nigroviridis
ENSSMAG00000004047	rrp12	78	73.529	ENSTBEG00000004907	RRP12	80	73.529	Tupaia_belangeri
ENSSMAG00000004047	rrp12	100	59.430	ENSTTRG00000009878	RRP12	99	59.394	Tursiops_truncatus
ENSSMAG00000004047	rrp12	99	62.241	ENSUAMG00000009092	RRP12	99	62.442	Ursus_americanus
ENSSMAG00000004047	rrp12	99	60.569	ENSUMAG00000021621	RRP12	99	60.606	Ursus_maritimus
ENSSMAG00000004047	rrp12	99	62.074	ENSVVUG00000023168	RRP12	99	62.093	Vulpes_vulpes
ENSSMAG00000004047	rrp12	99	65.143	ENSXETG00000003430	rrp12	99	65.133	Xenopus_tropicalis
ENSSMAG00000004047	rrp12	90	84.523	ENSXCOG00000012082	rrp12	96	84.735	Xiphophorus_couchianus
ENSSMAG00000004047	rrp12	99	85.234	ENSXMAG00000013498	rrp12	99	85.078	Xiphophorus_maculatus