EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000004078 (Gene tree)
Gene ID: -
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 15967 bases
Position: chr4:7082580-7098546
Accession: ZDB-GENE-030114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000006656	tRNA-synt_1g	PF09334.11	2.2e-16	1	2
ENSSMAP00000006656	tRNA-synt_1g	PF09334.11	2.2e-16	2	2
ENSSMAP00000006656	Anticodon_1	PF08264.13	5.8e-15	1	1
ENSSMAP00000006656	tRNA-synt_1	PF00133.22	1.4e-38	1	2
ENSSMAP00000006656	tRNA-synt_1	PF00133.22	1.4e-38	2	2
ENSSMAP00000006656	tRNA-synt_1e	PF01406.19	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000006739	-	3785	-	ENSSMAP00000006656	1071 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004078	larsb	97	79.962	ENSG00000133706	LARS	88	79.962	Homo_sapiens
ENSSMAG00000004078	larsb	97	94.247	ENSAPOG00000010585	larsb	93	94.247	Acanthochromis_polyacanthus
ENSSMAG00000004078	larsb	97	80.134	ENSAMEG00000017584	LARS	88	80.134	Ailuropoda_melanoleuca
ENSSMAG00000004078	larsb	97	92.632	ENSACIG00000014026	larsb	88	92.536	Amphilophus_citrinellus
ENSSMAG00000004078	larsb	97	94.727	ENSAOCG00000016931	larsb	88	94.631	Amphiprion_ocellaris
ENSSMAG00000004078	larsb	97	94.823	ENSAPEG00000017720	larsb	88	94.727	Amphiprion_percula
ENSSMAG00000004078	larsb	97	89.453	ENSATEG00000010441	larsb	87	89.645	Anabas_testudineus
ENSSMAG00000004078	larsb	93	80.919	ENSAPLG00000008145	LARS	87	81.119	Anas_platyrhynchos
ENSSMAG00000004078	larsb	97	78.907	ENSACAG00000013916	LARS	88	79.482	Anolis_carolinensis
ENSSMAG00000004078	larsb	97	69.703	ENSANAG00000014375	LARS	87	69.703	Aotus_nancymaae
ENSSMAG00000004078	larsb	97	94.151	ENSACLG00000010881	larsb	88	93.960	Astatotilapia_calliptera
ENSSMAG00000004078	larsb	97	88.111	ENSAMXG00000019979	larsb	88	87.919	Astyanax_mexicanus
ENSSMAG00000004078	larsb	97	78.866	ENSBTAG00000006765	LARS	88	78.866	Bos_taurus
ENSSMAG00000004078	larsb	97	59.182	WBGene00003073	lars-1	87	59.182	Caenorhabditis_elegans
ENSSMAG00000004078	larsb	97	80.249	ENSCJAG00000021314	LARS	88	80.249	Callithrix_jacchus
ENSSMAG00000004078	larsb	97	80.249	ENSCAFG00000006431	LARS	88	80.345	Canis_familiaris
ENSSMAG00000004078	larsb	97	80.307	ENSCAFG00020025009	LARS	88	80.403	Canis_lupus_dingo
ENSSMAG00000004078	larsb	97	79.195	ENSCHIG00000014949	LARS	88	79.195	Capra_hircus
ENSSMAG00000004078	larsb	97	79.482	ENSTSYG00000001253	LARS	88	79.482	Carlito_syrichta
ENSSMAG00000004078	larsb	89	63.703	ENSCAPG00000015676	LARS	83	63.703	Cavia_aperea
ENSSMAG00000004078	larsb	97	78.140	ENSCPOG00000012329	LARS	88	78.140	Cavia_porcellus
ENSSMAG00000004078	larsb	97	80.692	ENSCCAG00000020789	LARS	88	80.692	Cebus_capucinus
ENSSMAG00000004078	larsb	94	80.357	ENSCATG00000033463	LARS	87	80.567	Cercocebus_atys
ENSSMAG00000004078	larsb	97	78.907	ENSCLAG00000011193	LARS	88	78.907	Chinchilla_lanigera
ENSSMAG00000004078	larsb	97	79.866	ENSCSAG00000012280	LARS	86	79.866	Chlorocebus_sabaeus
ENSSMAG00000004078	larsb	86	77.778	ENSCHOG00000009309	LARS	78	77.778	Choloepus_hoffmanni
ENSSMAG00000004078	larsb	97	81.556	ENSCPBG00000008415	LARS	92	81.652	Chrysemys_picta_bellii
ENSSMAG00000004078	larsb	97	66.762	ENSCING00000008535	-	87	66.762	Ciona_intestinalis
ENSSMAG00000004078	larsb	97	65.870	ENSCSAVG00000009040	-	100	67.762	Ciona_savignyi
ENSSMAG00000004078	larsb	97	80.115	ENSCANG00000031137	LARS	88	80.115	Colobus_angolensis_palliatus
ENSSMAG00000004078	larsb	89	73.723	ENSCGRG00001004647	Lars	86	73.591	Cricetulus_griseus_chok1gshd
ENSSMAG00000004078	larsb	97	75.694	ENSCGRG00000007284	Lars	88	75.575	Cricetulus_griseus_crigri
ENSSMAG00000004078	larsb	97	93.289	ENSCSEG00000014984	larsb	88	93.193	Cynoglossus_semilaevis
ENSSMAG00000004078	larsb	97	93.384	ENSCVAG00000014685	larsb	88	93.480	Cyprinodon_variegatus
ENSSMAG00000004078	larsb	61	88.737	ENSDARG00000019280	larsb	82	88.737	Danio_rerio
ENSSMAG00000004078	larsb	93	79.204	ENSDNOG00000017963	LARS	87	79.204	Dasypus_novemcinctus
ENSSMAG00000004078	larsb	97	74.593	ENSDORG00000014913	Lars	88	74.593	Dipodomys_ordii
ENSSMAG00000004078	larsb	99	60.405	FBgn0284253	LeuRS	90	60.592	Drosophila_melanogaster
ENSSMAG00000004078	larsb	97	63.208	ENSETEG00000003145	LARS	93	63.016	Echinops_telfairi
ENSSMAG00000004078	larsb	97	60.401	ENSEBUG00000014985	larsb	93	59.256	Eptatretus_burgeri
ENSSMAG00000004078	larsb	97	80.249	ENSEASG00005020569	LARS	88	80.249	Equus_asinus_asinus
ENSSMAG00000004078	larsb	97	80.153	ENSECAG00000008963	LARS	93	80.153	Equus_caballus
ENSSMAG00000004078	larsb	78	79.167	ENSEEUG00000014854	LARS	70	79.167	Erinaceus_europaeus
ENSSMAG00000004078	larsb	97	87.248	ENSELUG00000023311	larsb	88	87.344	Esox_lucius
ENSSMAG00000004078	larsb	97	80.115	ENSFCAG00000008715	LARS	97	80.058	Felis_catus
ENSSMAG00000004078	larsb	97	80.441	ENSFALG00000003209	LARS	81	80.441	Ficedula_albicollis
ENSSMAG00000004078	larsb	97	78.140	ENSFDAG00000020764	LARS	88	78.332	Fukomys_damarensis
ENSSMAG00000004078	larsb	87	92.750	ENSFHEG00000010437	larsb	87	92.683	Fundulus_heteroclitus
ENSSMAG00000004078	larsb	97	87.716	ENSGMOG00000013645	larsb	88	87.716	Gadus_morhua
ENSSMAG00000004078	larsb	97	81.358	ENSGALG00000007494	LARS	88	82.993	Gallus_gallus
ENSSMAG00000004078	larsb	97	91.946	ENSGAFG00000005029	larsb	88	92.042	Gambusia_affinis
ENSSMAG00000004078	larsb	97	91.747	ENSGACG00000020720	larsb	88	91.747	Gasterosteus_aculeatus
ENSSMAG00000004078	larsb	97	80.788	ENSGAGG00000002353	LARS	88	80.788	Gopherus_agassizii
ENSSMAG00000004078	larsb	97	80.115	ENSGGOG00000004103	LARS	88	80.115	Gorilla_gorilla
ENSSMAG00000004078	larsb	97	94.056	ENSHBUG00000003051	larsb	94	93.864	Haplochromis_burtoni
ENSSMAG00000004078	larsb	97	78.907	ENSHGLG00000006937	LARS	88	78.907	Heterocephalus_glaber_female
ENSSMAG00000004078	larsb	97	78.907	ENSHGLG00100002801	LARS	88	78.907	Heterocephalus_glaber_male
ENSSMAG00000004078	larsb	97	92.330	ENSHCOG00000003651	larsb	88	92.234	Hippocampus_comes
ENSSMAG00000004078	larsb	97	85.810	ENSIPUG00000010756	lars	89	85.810	Ictalurus_punctatus
ENSSMAG00000004078	larsb	97	79.482	ENSSTOG00000002356	LARS	88	79.482	Ictidomys_tridecemlineatus
ENSSMAG00000004078	larsb	97	77.948	ENSJJAG00000015265	Lars	88	78.044	Jaculus_jaculus
ENSSMAG00000004078	larsb	97	94.535	ENSKMAG00000009903	larsb	88	94.631	Kryptolebias_marmoratus
ENSSMAG00000004078	larsb	97	93.960	ENSLBEG00000025237	larsb	88	94.061	Labrus_bergylta
ENSSMAG00000004078	larsb	97	80.670	ENSLACG00000009321	LARS	88	80.670	Latimeria_chalumnae
ENSSMAG00000004078	larsb	97	83.317	ENSLOCG00000010442	larsb	88	83.509	Lepisosteus_oculatus
ENSSMAG00000004078	larsb	97	79.386	ENSLAFG00000000318	LARS	88	79.386	Loxodonta_africana
ENSSMAG00000004078	larsb	97	80.019	ENSMFAG00000038685	LARS	88	80.019	Macaca_fascicularis
ENSSMAG00000004078	larsb	97	79.962	ENSMMUG00000029787	LARS	88	79.962	Macaca_mulatta
ENSSMAG00000004078	larsb	97	77.810	ENSMNEG00000044014	LARS	87	77.810	Macaca_nemestrina
ENSSMAG00000004078	larsb	97	80.019	ENSMLEG00000037563	LARS	88	80.019	Mandrillus_leucophaeus
ENSSMAG00000004078	larsb	97	95.110	ENSMAMG00000021385	larsb	88	95.014	Mastacembelus_armatus
ENSSMAG00000004078	larsb	97	94.056	ENSMZEG00005002662	larsb	88	93.864	Maylandia_zebra
ENSSMAG00000004078	larsb	93	82.318	ENSMGAG00000009388	LARS	87	82.617	Meleagris_gallopavo
ENSSMAG00000004078	larsb	97	67.562	ENSMAUG00000003063	Lars	80	78.814	Mesocricetus_auratus
ENSSMAG00000004078	larsb	97	80.403	ENSMICG00000035589	-	88	80.403	Microcebus_murinus
ENSSMAG00000004078	larsb	97	67.114	ENSMICG00000035435	-	88	67.114	Microcebus_murinus
ENSSMAG00000004078	larsb	97	77.608	ENSMOCG00000002092	Lars	88	77.490	Microtus_ochrogaster
ENSSMAG00000004078	larsb	97	90.221	ENSMMOG00000013802	larsb	88	90.221	Mola_mola
ENSSMAG00000004078	larsb	97	73.487	ENSMODG00000010231	LARS	88	73.487	Monodelphis_domestica
ENSSMAG00000004078	larsb	97	92.176	ENSMALG00000018444	larsb	88	92.080	Monopterus_albus
ENSSMAG00000004078	larsb	97	78.086	MGP_CAROLIEiJ_G0022225	Lars	88	77.969	Mus_caroli
ENSSMAG00000004078	larsb	97	77.703	ENSMUSG00000024493	Lars	88	77.586	Mus_musculus
ENSSMAG00000004078	larsb	97	77.990	MGP_PahariEiJ_G0018958	Lars	88	77.874	Mus_pahari
ENSSMAG00000004078	larsb	97	78.086	MGP_SPRETEiJ_G0023135	Lars	88	77.969	Mus_spretus
ENSSMAG00000004078	larsb	97	80.058	ENSMPUG00000007844	LARS	88	80.058	Mustela_putorius_furo
ENSSMAG00000004078	larsb	97	78.963	ENSMLUG00000001125	LARS	88	78.963	Myotis_lucifugus
ENSSMAG00000004078	larsb	98	77.048	ENSNGAG00000011596	Lars	89	77.048	Nannospalax_galili
ENSSMAG00000004078	larsb	97	94.247	ENSNBRG00000005764	larsb	88	94.056	Neolamprologus_brichardi
ENSSMAG00000004078	larsb	97	79.827	ENSNLEG00000009816	LARS	88	79.827	Nomascus_leucogenys
ENSSMAG00000004078	larsb	73	84.932	ENSOPRG00000003076	LARS	70	84.932	Ochotona_princeps
ENSSMAG00000004078	larsb	97	76.081	ENSODEG00000004882	LARS	88	76.081	Octodon_degus
ENSSMAG00000004078	larsb	97	94.631	ENSONIG00000008493	larsb	88	94.439	Oreochromis_niloticus
ENSSMAG00000004078	larsb	97	77.385	ENSOANG00000005755	LARS	88	77.385	Ornithorhynchus_anatinus
ENSSMAG00000004078	larsb	97	79.866	ENSOCUG00000015684	LARS	88	79.866	Oryctolagus_cuniculus
ENSSMAG00000004078	larsb	97	92.905	ENSORLG00000001622	larsb	88	93.001	Oryzias_latipes
ENSSMAG00000004078	larsb	97	92.905	ENSORLG00020019950	larsb	88	93.001	Oryzias_latipes_hni
ENSSMAG00000004078	larsb	97	93.097	ENSORLG00015003895	larsb	88	93.193	Oryzias_latipes_hsok
ENSSMAG00000004078	larsb	97	93.001	ENSOMEG00000005677	larsb	89	92.905	Oryzias_melastigma
ENSSMAG00000004078	larsb	93	77.403	ENSOGAG00000008750	LARS	87	77.403	Otolemur_garnettii
ENSSMAG00000004078	larsb	97	78.983	ENSOARG00000002454	-	88	78.983	Ovis_aries
ENSSMAG00000004078	larsb	97	78.907	ENSOARG00000015911	-	87	78.907	Ovis_aries
ENSSMAG00000004078	larsb	97	80.019	ENSPPAG00000027964	LARS	88	80.019	Pan_paniscus
ENSSMAG00000004078	larsb	97	79.866	ENSPPRG00000023492	LARS	88	79.866	Panthera_pardus
ENSSMAG00000004078	larsb	97	79.962	ENSPTIG00000013110	LARS	88	79.962	Panthera_tigris_altaica
ENSSMAG00000004078	larsb	97	79.923	ENSPTRG00000017372	LARS	88	79.923	Pan_troglodytes
ENSSMAG00000004078	larsb	97	80.019	ENSPANG00000002663	LARS	88	80.019	Papio_anubis
ENSSMAG00000004078	larsb	97	84.564	ENSPKIG00000006650	larsb	88	82.201	Paramormyrops_kingsleyae
ENSSMAG00000004078	larsb	97	81.268	ENSPSIG00000015641	LARS	88	81.268	Pelodiscus_sinensis
ENSSMAG00000004078	larsb	61	93.607	ENSPMGG00000019556	LARS	82	93.607	Periophthalmus_magnuspinnatus
ENSSMAG00000004078	larsb	97	73.780	ENSPEMG00000010933	Lars	87	73.659	Peromyscus_maniculatus_bairdii
ENSSMAG00000004078	larsb	97	78.428	ENSPCIG00000030572	LARS	88	78.428	Phascolarctos_cinereus
ENSSMAG00000004078	larsb	97	93.001	ENSPFOG00000002361	larsb	88	93.097	Poecilia_formosa
ENSSMAG00000004078	larsb	97	93.001	ENSPLAG00000016550	larsb	88	93.097	Poecilia_latipinna
ENSSMAG00000004078	larsb	97	92.809	ENSPMEG00000018422	larsb	88	92.905	Poecilia_mexicana
ENSSMAG00000004078	larsb	97	92.809	ENSPREG00000005668	larsb	88	92.905	Poecilia_reticulata
ENSSMAG00000004078	larsb	97	78.044	ENSPPYG00000015908	LARS	85	78.044	Pongo_abelii
ENSSMAG00000004078	larsb	91	68.750	ENSPCAG00000005621	LARS	89	65.678	Procavia_capensis
ENSSMAG00000004078	larsb	97	78.811	ENSPCOG00000019325	LARS	99	67.857	Propithecus_coquereli
ENSSMAG00000004078	larsb	93	70.060	ENSPVAG00000011237	LARS	87	70.659	Pteropus_vampyrus
ENSSMAG00000004078	larsb	97	93.864	ENSPNYG00000015254	larsb	88	93.672	Pundamilia_nyererei
ENSSMAG00000004078	larsb	97	86.002	ENSPNAG00000027191	larsb	88	86.002	Pygocentrus_nattereri
ENSSMAG00000004078	larsb	97	77.608	ENSRNOG00000018304	Lars	88	77.490	Rattus_norvegicus
ENSSMAG00000004078	larsb	97	77.618	ENSRBIG00000043198	LARS	93	77.618	Rhinopithecus_bieti
ENSSMAG00000004078	larsb	95	46.974	YPL160W	CDC60	93	47.161	Saccharomyces_cerevisiae
ENSSMAG00000004078	larsb	97	77.329	ENSSBOG00000026661	LARS	87	80.639	Saimiri_boliviensis_boliviensis
ENSSMAG00000004078	larsb	97	79.789	ENSSHAG00000006084	LARS	88	79.789	Sarcophilus_harrisii
ENSSMAG00000004078	larsb	97	85.331	ENSSFOG00015018117	larsb	82	85.331	Scleropages_formosus
ENSSMAG00000004078	larsb	97	95.590	ENSSDUG00000021142	larsb	88	95.494	Seriola_dumerili
ENSSMAG00000004078	larsb	97	95.877	ENSSLDG00000007054	larsb	88	95.781	Seriola_lalandi_dorsalis
ENSSMAG00000004078	larsb	81	72.535	ENSSARG00000013481	LARS	71	77.119	Sorex_araneus
ENSSMAG00000004078	larsb	98	80.975	ENSSPUG00000013805	LARS	88	80.975	Sphenodon_punctatus
ENSSMAG00000004078	larsb	97	95.398	ENSSPAG00000012124	larsb	88	95.302	Stegastes_partitus
ENSSMAG00000004078	larsb	97	76.420	ENSSSCG00000014411	LARS	88	76.414	Sus_scrofa
ENSSMAG00000004078	larsb	97	80.884	ENSTGUG00000000092	-	88	80.884	Taeniopygia_guttata
ENSSMAG00000004078	larsb	97	90.700	ENSTRUG00000005358	larsb	88	90.604	Takifugu_rubripes
ENSSMAG00000004078	larsb	97	85.960	ENSTNIG00000018214	larsb	88	85.864	Tetraodon_nigroviridis
ENSSMAG00000004078	larsb	87	76.078	ENSTBEG00000003757	LARS	81	76.078	Tupaia_belangeri
ENSSMAG00000004078	larsb	93	80.100	ENSTTRG00000016712	LARS	84	80.100	Tursiops_truncatus
ENSSMAG00000004078	larsb	97	79.962	ENSUAMG00000019907	LARS	93	79.962	Ursus_americanus
ENSSMAG00000004078	larsb	97	79.962	ENSUMAG00000010585	LARS	88	79.962	Ursus_maritimus
ENSSMAG00000004078	larsb	89	79.691	ENSVPAG00000000557	LARS	80	79.691	Vicugna_pacos
ENSSMAG00000004078	larsb	97	80.249	ENSVVUG00000021124	LARS	88	80.249	Vulpes_vulpes
ENSSMAG00000004078	larsb	97	81.034	ENSXETG00000002320	lars	88	81.034	Xenopus_tropicalis
ENSSMAG00000004078	larsb	97	92.042	ENSXMAG00000001454	larsb	88	92.138	Xiphophorus_maculatus