EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000004079 (Gene tree)
Gene ID: -
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b%2C subunit 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 9450 bases
Position: chr2:3078740-3088189
Accession: ZDB-GENE-070928-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000006672	DUF382	PF04037.13	1.8e-58	1	1
ENSSMAP00000006637	DUF382	PF04037.13	2.1e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000006719	-	4293	-	ENSSMAP00000006637	909 (aa)	-	-
ENSSMAT00000006756	-	2532	-	ENSSMAP00000006672	843 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004079	sf3b2	88	75.065	ENSG00000087365	SF3B2	99	90.221	Homo_sapiens
ENSSMAG00000004079	sf3b2	95	89.030	ENSAPOG00000001974	sf3b2	97	89.547	Acanthochromis_polyacanthus
ENSSMAG00000004079	sf3b2	88	75.260	ENSAMEG00000017206	SF3B2	84	75.000	Ailuropoda_melanoleuca
ENSSMAG00000004079	sf3b2	97	85.347	ENSACIG00000000624	sf3b2	100	85.011	Amphilophus_citrinellus
ENSSMAG00000004079	sf3b2	97	90.011	ENSAOCG00000009207	sf3b2	100	90.465	Amphiprion_ocellaris
ENSSMAG00000004079	sf3b2	98	89.314	ENSAPEG00000002762	sf3b2	98	89.539	Amphiprion_percula
ENSSMAG00000004079	sf3b2	97	56.735	ENSACAG00000008615	SF3B2	59	71.078	Anolis_carolinensis
ENSSMAG00000004079	sf3b2	88	74.935	ENSANAG00000029120	SF3B2	60	87.666	Aotus_nancymaae
ENSSMAG00000004079	sf3b2	100	86.030	ENSACLG00000014771	sf3b2	100	88.295	Astatotilapia_calliptera
ENSSMAG00000004079	sf3b2	97	76.196	ENSAMXG00000007929	sf3b2	100	77.402	Astyanax_mexicanus
ENSSMAG00000004079	sf3b2	88	75.000	ENSBTAG00000002778	SF3B2	84	75.098	Bos_taurus
ENSSMAG00000004079	sf3b2	66	48.041	WBGene00021004	sftb-2	88	49.259	Caenorhabditis_elegans
ENSSMAG00000004079	sf3b2	88	75.065	ENSCJAG00000001656	SF3B2	60	87.666	Callithrix_jacchus
ENSSMAG00000004079	sf3b2	88	75.228	ENSCAFG00000013033	SF3B2	84	75.098	Canis_familiaris
ENSSMAG00000004079	sf3b2	88	75.228	ENSCAFG00020015382	SF3B2	84	75.098	Canis_lupus_dingo
ENSSMAG00000004079	sf3b2	88	74.870	ENSCHIG00000011211	SF3B2	84	73.982	Capra_hircus
ENSSMAG00000004079	sf3b2	88	75.065	ENSTSYG00000000959	SF3B2	84	74.804	Carlito_syrichta
ENSSMAG00000004079	sf3b2	50	61.628	ENSCAPG00000006065	SF3B2	79	90.678	Cavia_aperea
ENSSMAG00000004079	sf3b2	78	71.848	ENSCPOG00000008294	SF3B2	96	65.470	Cavia_porcellus
ENSSMAG00000004079	sf3b2	88	75.065	ENSCCAG00000035256	SF3B2	60	87.666	Cebus_capucinus
ENSSMAG00000004079	sf3b2	88	75.065	ENSCATG00000042240	SF3B2	60	87.666	Cercocebus_atys
ENSSMAG00000004079	sf3b2	88	73.377	ENSCLAG00000016852	SF3B2	97	67.299	Chinchilla_lanigera
ENSSMAG00000004079	sf3b2	88	75.065	ENSCSAG00000008121	SF3B2	59	87.666	Chlorocebus_sabaeus
ENSSMAG00000004079	sf3b2	79	87.755	ENSCHOG00000001476	SF3B2	70	84.766	Choloepus_hoffmanni
ENSSMAG00000004079	sf3b2	88	71.923	ENSCPBG00000022465	SF3B2	94	72.466	Chrysemys_picta_bellii
ENSSMAG00000004079	sf3b2	77	60.308	ENSCING00000005665	-	83	67.304	Ciona_intestinalis
ENSSMAG00000004079	sf3b2	63	67.232	ENSCSAVG00000002029	-	83	66.922	Ciona_savignyi
ENSSMAG00000004079	sf3b2	88	75.065	ENSCANG00000039680	SF3B2	60	87.666	Colobus_angolensis_palliatus
ENSSMAG00000004079	sf3b2	88	73.636	ENSCGRG00001015741	Sf3b2	97	67.299	Cricetulus_griseus_chok1gshd
ENSSMAG00000004079	sf3b2	88	73.636	ENSCGRG00000018110	Sf3b2	97	67.299	Cricetulus_griseus_crigri
ENSSMAG00000004079	sf3b2	89	79.447	ENSCSEG00000000230	sf3b2	100	76.457	Cynoglossus_semilaevis
ENSSMAG00000004079	sf3b2	97	83.787	ENSCVAG00000003357	sf3b2	100	82.313	Cyprinodon_variegatus
ENSSMAG00000004079	sf3b2	94	71.315	ENSDARG00000018049	sf3b2	99	72.872	Danio_rerio
ENSSMAG00000004079	sf3b2	90	71.322	ENSDNOG00000009484	SF3B2	92	73.281	Dasypus_novemcinctus
ENSSMAG00000004079	sf3b2	88	72.727	ENSDORG00000002495	Sf3b2	97	67.336	Dipodomys_ordii
ENSSMAG00000004079	sf3b2	71	81.106	ENSETEG00000020284	SF3B2	68	81.030	Echinops_telfairi
ENSSMAG00000004079	sf3b2	97	56.419	ENSEBUG00000013703	sf3b2	99	53.556	Eptatretus_burgeri
ENSSMAG00000004079	sf3b2	88	75.130	ENSEASG00005004508	SF3B2	59	87.666	Equus_asinus_asinus
ENSSMAG00000004079	sf3b2	88	75.130	ENSECAG00000024461	SF3B2	59	87.666	Equus_caballus
ENSSMAG00000004079	sf3b2	59	84.167	ENSEEUG00000014278	-	57	84.167	Erinaceus_europaeus
ENSSMAG00000004079	sf3b2	97	79.117	ENSELUG00000005586	sf3b2	100	79.010	Esox_lucius
ENSSMAG00000004079	sf3b2	88	75.359	ENSFCAG00000013289	SF3B2	84	75.098	Felis_catus
ENSSMAG00000004079	sf3b2	81	66.089	ENSFALG00000014653	SF3B2	74	75.096	Ficedula_albicollis
ENSSMAG00000004079	sf3b2	88	74.515	ENSFDAG00000019806	SF3B2	97	68.521	Fukomys_damarensis
ENSSMAG00000004079	sf3b2	97	83.239	ENSFHEG00000020968	sf3b2	100	82.786	Fundulus_heteroclitus
ENSSMAG00000004079	sf3b2	78	86.727	ENSGMOG00000012131	sf3b2	100	86.878	Gadus_morhua
ENSSMAG00000004079	sf3b2	100	82.273	ENSGAFG00000001675	sf3b2	100	84.389	Gambusia_affinis
ENSSMAG00000004079	sf3b2	78	88.438	ENSGACG00000019012	sf3b2	100	88.589	Gasterosteus_aculeatus
ENSSMAG00000004079	sf3b2	95	67.634	ENSGAGG00000023916	SF3B2	61	87.856	Gopherus_agassizii
ENSSMAG00000004079	sf3b2	75	89.859	ENSGGOG00000028448	SF3B2	60	87.666	Gorilla_gorilla
ENSSMAG00000004079	sf3b2	100	85.914	ENSHBUG00000017349	sf3b2	100	88.182	Haplochromis_burtoni
ENSSMAG00000004079	sf3b2	88	73.506	ENSHGLG00000010807	SF3B2	60	87.476	Heterocephalus_glaber_female
ENSSMAG00000004079	sf3b2	88	75.065	ENSHGLG00100006361	SF3B2	60	87.476	Heterocephalus_glaber_male
ENSSMAG00000004079	sf3b2	100	77.523	ENSHCOG00000016203	sf3b2	100	78.241	Hippocampus_comes
ENSSMAG00000004079	sf3b2	100	71.162	ENSIPUG00000009383	sf3b2	100	74.699	Ictalurus_punctatus
ENSSMAG00000004079	sf3b2	88	74.935	ENSSTOG00000028892	SF3B2	97	68.750	Ictidomys_tridecemlineatus
ENSSMAG00000004079	sf3b2	88	73.221	ENSJJAG00000018193	Sf3b2	97	67.186	Jaculus_jaculus
ENSSMAG00000004079	sf3b2	97	82.921	ENSKMAG00000020181	sf3b2	100	81.348	Kryptolebias_marmoratus
ENSSMAG00000004079	sf3b2	97	88.462	ENSLBEG00000027739	sf3b2	100	89.593	Labrus_bergylta
ENSSMAG00000004079	sf3b2	80	77.914	ENSLACG00000010429	SF3B2	94	88.302	Latimeria_chalumnae
ENSSMAG00000004079	sf3b2	88	73.533	ENSLAFG00000002128	SF3B2	60	87.476	Loxodonta_africana
ENSSMAG00000004079	sf3b2	88	74.968	ENSMFAG00000003064	SF3B2	60	87.500	Macaca_fascicularis
ENSSMAG00000004079	sf3b2	88	71.018	ENSMMUG00000011743	SF3B2	60	81.214	Macaca_mulatta
ENSSMAG00000004079	sf3b2	88	75.065	ENSMNEG00000034437	SF3B2	60	87.666	Macaca_nemestrina
ENSSMAG00000004079	sf3b2	88	75.065	ENSMLEG00000029373	SF3B2	60	87.666	Mandrillus_leucophaeus
ENSSMAG00000004079	sf3b2	97	89.921	ENSMAMG00000014103	sf3b2	100	89.581	Mastacembelus_armatus
ENSSMAG00000004079	sf3b2	97	87.841	ENSMZEG00005020789	sf3b2	100	88.295	Maylandia_zebra
ENSSMAG00000004079	sf3b2	88	75.195	ENSMICG00000008565	-	60	87.476	Microcebus_murinus
ENSSMAG00000004079	sf3b2	97	66.253	ENSMICG00000016942	-	62	85.958	Microcebus_murinus
ENSSMAG00000004079	sf3b2	88	73.377	ENSMOCG00000003136	Sf3b2	97	67.188	Microtus_ochrogaster
ENSSMAG00000004079	sf3b2	100	80.686	ENSMMOG00000012928	sf3b2	100	82.179	Mola_mola
ENSSMAG00000004079	sf3b2	88	72.833	ENSMODG00000008490	-	64	87.856	Monodelphis_domestica
ENSSMAG00000004079	sf3b2	75	75.392	ENSMODG00000025020	-	82	80.190	Monodelphis_domestica
ENSSMAG00000004079	sf3b2	97	81.910	ENSMALG00000015137	sf3b2	100	82.697	Monopterus_albus
ENSSMAG00000004079	sf3b2	88	73.377	MGP_CAROLIEiJ_G0022539	Sf3b2	60	87.476	Mus_caroli
ENSSMAG00000004079	sf3b2	88	72.903	ENSMUSG00000024853	Sf3b2	60	87.666	Mus_musculus
ENSSMAG00000004079	sf3b2	88	73.247	MGP_PahariEiJ_G0014036	Sf3b2	97	67.522	Mus_pahari
ENSSMAG00000004079	sf3b2	88	72.774	MGP_SPRETEiJ_G0023453	Sf3b2	60	87.666	Mus_spretus
ENSSMAG00000004079	sf3b2	88	75.228	ENSMPUG00000011349	SF3B2	84	75.098	Mustela_putorius_furo
ENSSMAG00000004079	sf3b2	88	74.967	ENSMLUG00000011136	SF3B2	84	74.967	Myotis_lucifugus
ENSSMAG00000004079	sf3b2	88	72.987	ENSNGAG00000012103	Sf3b2	97	67.486	Nannospalax_galili
ENSSMAG00000004079	sf3b2	88	71.912	ENSNLEG00000006007	SF3B2	59	85.389	Nomascus_leucogenys
ENSSMAG00000004079	sf3b2	79	84.181	ENSMEUG00000000019	SF3B2	79	84.181	Notamacropus_eugenii
ENSSMAG00000004079	sf3b2	97	63.735	ENSODEG00000017764	SF3B2	58	81.973	Octodon_degus
ENSSMAG00000004079	sf3b2	97	88.523	ENSONIG00000013068	sf3b2	100	87.955	Oreochromis_niloticus
ENSSMAG00000004079	sf3b2	88	66.709	ENSOANG00000012482	SF3B2	79	85.268	Ornithorhynchus_anatinus
ENSSMAG00000004079	sf3b2	64	47.780	ENSOCUG00000024154	-	59	58.716	Oryctolagus_cuniculus
ENSSMAG00000004079	sf3b2	100	69.897	ENSOCUG00000015722	-	62	87.856	Oryctolagus_cuniculus
ENSSMAG00000004079	sf3b2	100	81.977	ENSORLG00000008235	sf3b2	97	81.860	Oryzias_latipes
ENSSMAG00000004079	sf3b2	100	81.977	ENSORLG00020005357	sf3b2	100	81.860	Oryzias_latipes_hni
ENSSMAG00000004079	sf3b2	100	82.209	ENSORLG00015022454	sf3b2	89	81.327	Oryzias_latipes_hsok
ENSSMAG00000004079	sf3b2	100	81.235	ENSOMEG00000017480	sf3b2	100	80.886	Oryzias_melastigma
ENSSMAG00000004079	sf3b2	88	71.429	ENSOGAG00000005799	SF3B2	59	87.666	Otolemur_garnettii
ENSSMAG00000004079	sf3b2	97	65.733	ENSOARG00000002125	SF3B2	100	74.967	Ovis_aries
ENSSMAG00000004079	sf3b2	88	75.065	ENSPPAG00000007359	SF3B2	60	87.666	Pan_paniscus
ENSSMAG00000004079	sf3b2	88	75.359	ENSPPRG00000013334	SF3B2	84	75.098	Panthera_pardus
ENSSMAG00000004079	sf3b2	88	75.359	ENSPTIG00000015022	SF3B2	60	87.666	Panthera_tigris_altaica
ENSSMAG00000004079	sf3b2	88	75.065	ENSPTRG00000003912	SF3B2	60	87.666	Pan_troglodytes
ENSSMAG00000004079	sf3b2	88	75.065	ENSPANG00000008593	SF3B2	60	87.666	Papio_anubis
ENSSMAG00000004079	sf3b2	100	75.390	ENSPKIG00000016576	sf3b2	74	95.019	Paramormyrops_kingsleyae
ENSSMAG00000004079	sf3b2	92	71.517	ENSPSIG00000003158	SF3B2	79	88.046	Pelodiscus_sinensis
ENSSMAG00000004079	sf3b2	83	78.141	ENSPMGG00000000819	sf3b2	100	72.860	Periophthalmus_magnuspinnatus
ENSSMAG00000004079	sf3b2	88	73.506	ENSPEMG00000015437	Sf3b2	84	72.977	Peromyscus_maniculatus_bairdii
ENSSMAG00000004079	sf3b2	85	66.313	ENSPEMG00000015451	-	67	81.594	Peromyscus_maniculatus_bairdii
ENSSMAG00000004079	sf3b2	88	72.927	ENSPCIG00000008381	SF3B2	87	74.346	Phascolarctos_cinereus
ENSSMAG00000004079	sf3b2	100	81.001	ENSPFOG00000002552	sf3b2	100	83.918	Poecilia_formosa
ENSSMAG00000004079	sf3b2	100	81.115	ENSPLAG00000001471	sf3b2	100	83.579	Poecilia_latipinna
ENSSMAG00000004079	sf3b2	100	81.207	ENSPMEG00000013180	sf3b2	100	84.467	Poecilia_mexicana
ENSSMAG00000004079	sf3b2	97	82.220	ENSPREG00000002665	sf3b2	100	83.371	Poecilia_reticulata
ENSSMAG00000004079	sf3b2	88	75.359	ENSPCAG00000005129	SF3B2	84	75.229	Procavia_capensis
ENSSMAG00000004079	sf3b2	88	75.065	ENSPCOG00000025375	SF3B2	60	87.476	Propithecus_coquereli
ENSSMAG00000004079	sf3b2	89	85.376	ENSPNYG00000023594	sf3b2	100	85.216	Pundamilia_nyererei
ENSSMAG00000004079	sf3b2	97	74.863	ENSPNAG00000001891	sf3b2	100	77.473	Pygocentrus_nattereri
ENSSMAG00000004079	sf3b2	88	73.377	ENSRNOG00000020412	Sf3b2	60	87.476	Rattus_norvegicus
ENSSMAG00000004079	sf3b2	88	75.195	ENSRBIG00000034065	SF3B2	60	87.666	Rhinopithecus_bieti
ENSSMAG00000004079	sf3b2	88	75.195	ENSRROG00000034496	SF3B2	60	87.666	Rhinopithecus_roxellana
ENSSMAG00000004079	sf3b2	97	67.882	ENSSBOG00000026337	SF3B2	59	87.666	Saimiri_boliviensis_boliviensis
ENSSMAG00000004079	sf3b2	88	71.392	ENSSHAG00000010933	-	84	72.382	Sarcophilus_harrisii
ENSSMAG00000004079	sf3b2	96	59.737	ENSSHAG00000018043	-	88	63.926	Sarcophilus_harrisii
ENSSMAG00000004079	sf3b2	100	75.110	ENSSFOG00015021125	sf3b2	100	76.839	Scleropages_formosus
ENSSMAG00000004079	sf3b2	62	97.701	ENSSDUG00000008499	sf3b2	63	97.701	Seriola_dumerili
ENSSMAG00000004079	sf3b2	97	91.196	ENSSLDG00000006838	sf3b2	100	91.535	Seriola_lalandi_dorsalis
ENSSMAG00000004079	sf3b2	75	81.747	ENSSPUG00000009198	SF3B2	61	88.783	Sphenodon_punctatus
ENSSMAG00000004079	sf3b2	97	90.940	ENSSPAG00000004406	sf3b2	100	89.933	Stegastes_partitus
ENSSMAG00000004079	sf3b2	88	75.616	ENSSSCG00000012957	SF3B2	84	74.376	Sus_scrofa
ENSSMAG00000004079	sf3b2	100	68.265	ENSTRUG00000007611	sf3b2	76	87.097	Takifugu_rubripes
ENSSMAG00000004079	sf3b2	94	78.522	ENSTNIG00000007441	sf3b2	100	77.984	Tetraodon_nigroviridis
ENSSMAG00000004079	sf3b2	85	66.894	ENSTBEG00000004258	SF3B2	73	85.915	Tupaia_belangeri
ENSSMAG00000004079	sf3b2	88	75.228	ENSTTRG00000014339	SF3B2	84	75.098	Tursiops_truncatus
ENSSMAG00000004079	sf3b2	86	74.866	ENSUAMG00000020754	SF3B2	79	73.878	Ursus_americanus
ENSSMAG00000004079	sf3b2	88	75.359	ENSUMAG00000010994	SF3B2	84	75.098	Ursus_maritimus
ENSSMAG00000004079	sf3b2	88	75.228	ENSVVUG00000027029	SF3B2	59	87.666	Vulpes_vulpes
ENSSMAG00000004079	sf3b2	92	65.997	ENSXETG00000008422	sf3b2	94	68.000	Xenopus_tropicalis
ENSSMAG00000004079	sf3b2	89	77.454	ENSXCOG00000008943	sf3b2	80	93.499	Xiphophorus_couchianus
ENSSMAG00000004079	sf3b2	100	80.995	ENSXMAG00000008467	sf3b2	100	83.333	Xiphophorus_maculatus