EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000004252 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3220 bases
Position: chr1:15078045-15081264
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000006915	zf-C2H2	PF00096.26	2.5e-43	1	8
ENSSMAP00000006915	zf-C2H2	PF00096.26	2.5e-43	2	8
ENSSMAP00000006915	zf-C2H2	PF00096.26	2.5e-43	3	8
ENSSMAP00000006915	zf-C2H2	PF00096.26	2.5e-43	4	8
ENSSMAP00000006915	zf-C2H2	PF00096.26	2.5e-43	5	8
ENSSMAP00000006915	zf-C2H2	PF00096.26	2.5e-43	6	8
ENSSMAP00000006915	zf-C2H2	PF00096.26	2.5e-43	7	8
ENSSMAP00000006915	zf-C2H2	PF00096.26	2.5e-43	8	8
ENSSMAP00000006915	zf-met	PF12874.7	1.9e-13	1	3
ENSSMAP00000006915	zf-met	PF12874.7	1.9e-13	2	3
ENSSMAP00000006915	zf-met	PF12874.7	1.9e-13	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007001	-	1332	-	ENSSMAP00000006915	443 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004252's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000004252	-	84	45.865	ENSSMAG00000014844	-	71	43.478
ENSSMAG00000004252	-	88	38.129	ENSSMAG00000008308	-	69	40.789
ENSSMAG00000004252	-	87	34.286	ENSSMAG00000005081	-	85	38.686
ENSSMAG00000004252	-	92	32.031	ENSSMAG00000002391	ZNF319	89	32.031
ENSSMAG00000004252	-	83	43.529	ENSSMAG00000004259	-	66	43.529
ENSSMAG00000004252	-	91	39.130	ENSSMAG00000013291	-	92	37.681
ENSSMAG00000004252	-	93	40.351	ENSSMAG00000021251	-	97	40.351
ENSSMAG00000004252	-	96	40.113	ENSSMAG00000009020	znf526	60	32.537
ENSSMAG00000004252	-	82	43.925	ENSSMAG00000005076	-	99	43.925
ENSSMAG00000004252	-	90	35.857	ENSSMAG00000013676	-	80	35.857
ENSSMAG00000004252	-	85	37.931	ENSSMAG00000006825	-	95	37.963
ENSSMAG00000004252	-	87	46.429	ENSSMAG00000009115	-	84	47.059
ENSSMAG00000004252	-	89	40.952	ENSSMAG00000002798	-	73	40.952
ENSSMAG00000004252	-	85	42.400	ENSSMAG00000017045	-	54	42.400
ENSSMAG00000004252	-	70	50.000	ENSSMAG00000009679	-	80	50.000
ENSSMAG00000004252	-	86	45.349	ENSSMAG00000015347	-	83	45.349
ENSSMAG00000004252	-	86	37.037	ENSSMAG00000019949	-	73	46.875
ENSSMAG00000004252	-	89	33.616	ENSSMAG00000015849	znf319b	89	33.616
ENSSMAG00000004252	-	90	34.211	ENSSMAG00000021271	-	67	34.211
ENSSMAG00000004252	-	84	39.535	ENSSMAG00000015181	gfi1b	63	39.535
ENSSMAG00000004252	-	92	30.189	ENSSMAG00000000404	-	85	34.118
ENSSMAG00000004252	-	85	41.772	ENSSMAG00000013828	-	61	41.772
ENSSMAG00000004252	-	83	49.533	ENSSMAG00000006197	-	95	37.255
ENSSMAG00000004252	-	92	41.892	ENSSMAG00000007561	znf236	77	41.892
ENSSMAG00000004252	-	86	41.892	ENSSMAG00000015282	-	78	41.892
ENSSMAG00000004252	-	92	41.096	ENSSMAG00000013663	-	85	50.000
ENSSMAG00000004252	-	89	48.485	ENSSMAG00000009685	-	84	40.123
ENSSMAG00000004252	-	82	45.946	ENSSMAG00000009609	-	98	45.946
ENSSMAG00000004252	-	88	35.465	ENSSMAG00000015041	si:dkey-7i4.5	91	35.948
ENSSMAG00000004252	-	84	33.645	ENSSMAG00000002031	-	57	33.645
ENSSMAG00000004252	-	84	44.828	ENSSMAG00000015356	-	76	44.828
ENSSMAG00000004252	-	87	32.759	ENSSMAG00000008907	zbtb41	60	34.667
ENSSMAG00000004252	-	83	38.462	ENSSMAG00000019364	snai2	66	38.462
ENSSMAG00000004252	-	93	32.267	ENSSMAG00000014597	-	60	32.653
ENSSMAG00000004252	-	86	38.562	ENSSMAG00000004429	-	86	38.562
ENSSMAG00000004252	-	83	39.053	ENSSMAG00000018844	prdm5	76	39.053
ENSSMAG00000004252	-	91	40.816	ENSSMAG00000000056	-	52	33.636
ENSSMAG00000004252	-	86	42.727	ENSSMAG00000002419	wt1b	51	42.727
ENSSMAG00000004252	-	81	35.526	ENSSMAG00000008834	-	53	35.526
ENSSMAG00000004252	-	83	39.474	ENSSMAG00000019980	-	66	39.474
ENSSMAG00000004252	-	84	38.576	ENSSMAG00000007396	-	85	37.101
ENSSMAG00000004252	-	84	45.122	ENSSMAG00000014864	-	100	39.216
ENSSMAG00000004252	-	83	35.329	ENSSMAG00000020844	patz1	63	33.796
ENSSMAG00000004252	-	92	38.438	ENSSMAG00000003594	-	82	42.697
ENSSMAG00000004252	-	87	45.455	ENSSMAG00000006155	-	62	45.455
ENSSMAG00000004252	-	84	37.398	ENSSMAG00000019207	scrt1b	54	37.398

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004252	-	84	42.759	ENSACAG00000008664	-	65	42.759	Anolis_carolinensis
ENSSMAG00000004252	-	84	35.211	ENSACAG00000024898	-	98	35.211	Anolis_carolinensis
ENSSMAG00000004252	-	88	41.615	ENSACAG00000024956	-	77	40.323	Anolis_carolinensis
ENSSMAG00000004252	-	82	40.000	ENSAMXG00000032841	-	77	38.916	Astyanax_mexicanus
ENSSMAG00000004252	-	82	43.243	ENSAMXG00000038636	-	98	42.388	Astyanax_mexicanus
ENSSMAG00000004252	-	84	40.717	ENSAMXG00000038325	-	96	40.717	Astyanax_mexicanus
ENSSMAG00000004252	-	85	40.933	ENSAMXG00000042746	-	85	40.933	Astyanax_mexicanus
ENSSMAG00000004252	-	90	41.779	ENSAMXG00000010805	-	98	41.779	Astyanax_mexicanus
ENSSMAG00000004252	-	86	42.276	ENSAMXG00000034847	-	88	41.504	Astyanax_mexicanus
ENSSMAG00000004252	-	94	47.445	ENSAMXG00000034344	-	76	47.445	Astyanax_mexicanus
ENSSMAG00000004252	-	84	40.933	ENSAMXG00000038536	-	85	40.933	Astyanax_mexicanus
ENSSMAG00000004252	-	83	37.981	ENSAMXG00000035246	-	68	38.462	Astyanax_mexicanus
ENSSMAG00000004252	-	87	41.883	ENSAMXG00000025452	-	99	44.444	Astyanax_mexicanus
ENSSMAG00000004252	-	82	47.321	ENSAMXG00000042784	-	94	47.321	Astyanax_mexicanus
ENSSMAG00000004252	-	86	44.444	ENSAMXG00000036233	-	83	44.444	Astyanax_mexicanus
ENSSMAG00000004252	-	84	35.021	ENSBTAG00000038322	-	75	35.021	Bos_taurus
ENSSMAG00000004252	-	87	32.174	ENSCPBG00000008580	-	75	32.153	Chrysemys_picta_bellii
ENSSMAG00000004252	-	89	35.754	ENSCPBG00000013652	-	72	34.405	Chrysemys_picta_bellii
ENSSMAG00000004252	-	85	36.474	ENSCPBG00000001526	-	81	38.095	Chrysemys_picta_bellii
ENSSMAG00000004252	-	86	42.038	ENSCPBG00000026433	-	51	43.478	Chrysemys_picta_bellii
ENSSMAG00000004252	-	83	39.355	ENSCSAVG00000010960	-	100	36.066	Ciona_savignyi
ENSSMAG00000004252	-	88	34.576	ENSDNOG00000047495	-	82	33.910	Dasypus_novemcinctus
ENSSMAG00000004252	-	86	36.196	ENSEBUG00000005264	-	76	36.196	Eptatretus_burgeri
ENSSMAG00000004252	-	86	39.735	ENSEBUG00000012919	-	77	39.735	Eptatretus_burgeri
ENSSMAG00000004252	-	86	36.156	ENSEBUG00000014717	-	72	36.156	Eptatretus_burgeri
ENSSMAG00000004252	-	85	40.805	ENSEBUG00000011435	-	81	36.240	Eptatretus_burgeri
ENSSMAG00000004252	-	86	37.330	ENSEBUG00000002075	-	77	37.330	Eptatretus_burgeri
ENSSMAG00000004252	-	86	36.458	ENSEBUG00000008306	-	79	38.298	Eptatretus_burgeri
ENSSMAG00000004252	-	85	36.765	ENSEBUG00000011694	-	97	38.934	Eptatretus_burgeri
ENSSMAG00000004252	-	91	34.706	ENSEBUG00000013875	-	83	33.553	Eptatretus_burgeri
ENSSMAG00000004252	-	86	35.802	ENSEBUG00000015837	-	67	35.802	Eptatretus_burgeri
ENSSMAG00000004252	-	83	35.274	ENSEASG00005004469	-	73	38.021	Equus_asinus_asinus
ENSSMAG00000004252	-	87	36.306	ENSFHEG00000004382	-	51	35.531	Fundulus_heteroclitus
ENSSMAG00000004252	-	88	37.576	ENSGMOG00000018506	-	100	41.509	Gadus_morhua
ENSSMAG00000004252	-	86	38.416	ENSGALG00000046336	-	98	45.926	Gallus_gallus
ENSSMAG00000004252	-	84	39.084	ENSGALG00000054325	-	99	39.554	Gallus_gallus
ENSSMAG00000004252	-	91	37.056	ENSGALG00000055127	-	78	37.349	Gallus_gallus
ENSSMAG00000004252	-	83	38.338	ENSGALG00000053507	-	78	38.338	Gallus_gallus
ENSSMAG00000004252	-	84	39.896	ENSGALG00000049609	-	56	39.896	Gallus_gallus
ENSSMAG00000004252	-	86	39.936	ENSGALG00000044069	-	53	39.936	Gallus_gallus
ENSSMAG00000004252	-	85	39.259	ENSGACG00000006283	-	95	39.259	Gasterosteus_aculeatus
ENSSMAG00000004252	-	84	45.185	ENSGAGG00000011399	-	86	45.185	Gopherus_agassizii
ENSSMAG00000004252	-	94	40.730	ENSGAGG00000011366	-	92	41.279	Gopherus_agassizii
ENSSMAG00000004252	-	88	37.135	ENSGAGG00000018885	-	67	40.741	Gopherus_agassizii
ENSSMAG00000004252	-	91	35.439	ENSHCOG00000018201	-	85	36.059	Hippocampus_comes
ENSSMAG00000004252	-	85	41.076	ENSIPUG00000015468	-	90	41.425	Ictalurus_punctatus
ENSSMAG00000004252	-	85	42.105	ENSIPUG00000021515	-	87	42.105	Ictalurus_punctatus
ENSSMAG00000004252	-	88	32.448	ENSIPUG00000012109	ZN12	51	32.797	Ictalurus_punctatus
ENSSMAG00000004252	-	92	41.270	ENSJJAG00000023633	Zfp672	91	44.749	Jaculus_jaculus
ENSSMAG00000004252	-	86	38.129	ENSLACG00000005264	-	97	38.129	Latimeria_chalumnae
ENSSMAG00000004252	-	86	37.845	ENSLACG00000022211	-	76	38.310	Latimeria_chalumnae
ENSSMAG00000004252	-	85	35.409	ENSLACG00000009005	-	100	35.409	Latimeria_chalumnae
ENSSMAG00000004252	-	85	38.860	ENSLOCG00000017864	-	100	38.860	Lepisosteus_oculatus
ENSSMAG00000004252	-	83	40.057	ENSMGAG00000013362	-	100	40.057	Meleagris_gallopavo
ENSSMAG00000004252	-	84	45.205	ENSMAUG00000009945	Zfp672	93	34.314	Mesocricetus_auratus
ENSSMAG00000004252	-	84	40.541	ENSMMOG00000003923	-	92	38.636	Mola_mola
ENSSMAG00000004252	-	89	35.714	ENSMODG00000014052	-	100	35.714	Monodelphis_domestica
ENSSMAG00000004252	-	90	38.905	ENSMODG00000010532	-	89	38.905	Monodelphis_domestica
ENSSMAG00000004252	-	90	38.919	ENSMODG00000001880	-	79	38.919	Monodelphis_domestica
ENSSMAG00000004252	-	84	44.749	MGP_CAROLIEiJ_G0016391	Zfp672	93	41.176	Mus_caroli
ENSSMAG00000004252	-	90	44.295	MGP_CAROLIEiJ_G0030502	-	62	39.316	Mus_caroli
ENSSMAG00000004252	-	86	44.749	ENSMUSG00000049755	Zfp672	93	44.749	Mus_musculus
ENSSMAG00000004252	-	87	46.715	ENSMUSG00000030823	9130019O22Rik	67	46.715	Mus_musculus
ENSSMAG00000004252	-	84	38.328	MGP_SPRETEiJ_G0031613	-	88	38.328	Mus_spretus
ENSSMAG00000004252	-	86	44.749	MGP_SPRETEiJ_G0017233	Zfp672	92	39.706	Mus_spretus
ENSSMAG00000004252	-	84	34.708	ENSNGAG00000015777	Zim1	65	33.333	Nannospalax_galili
ENSSMAG00000004252	-	87	36.176	ENSNBRG00000000708	-	95	36.176	Neolamprologus_brichardi
ENSSMAG00000004252	-	89	53.472	ENSNBRG00000007276	-	56	46.199	Neolamprologus_brichardi
ENSSMAG00000004252	-	85	44.595	ENSORLG00020001922	-	76	43.820	Oryzias_latipes_hni
ENSSMAG00000004252	-	82	37.226	ENSOMEG00000001598	-	79	36.842	Oryzias_melastigma
ENSSMAG00000004252	-	88	40.154	ENSPSIG00000005672	-	71	39.091	Pelodiscus_sinensis
ENSSMAG00000004252	-	86	39.193	ENSPSIG00000012650	-	74	40.000	Pelodiscus_sinensis
ENSSMAG00000004252	-	89	36.667	ENSPSIG00000006586	-	99	40.940	Pelodiscus_sinensis
ENSSMAG00000004252	-	84	41.618	ENSPSIG00000006790	-	94	41.618	Pelodiscus_sinensis
ENSSMAG00000004252	-	90	35.068	ENSPSIG00000010328	-	68	37.188	Pelodiscus_sinensis
ENSSMAG00000004252	-	82	40.691	ENSPSIG00000010248	-	68	43.960	Pelodiscus_sinensis
ENSSMAG00000004252	-	82	50.909	ENSPSIG00000013021	-	76	50.909	Pelodiscus_sinensis
ENSSMAG00000004252	-	90	41.202	ENSPSIG00000004502	-	62	40.851	Pelodiscus_sinensis
ENSSMAG00000004252	-	92	43.243	ENSPSIG00000016380	-	90	43.243	Pelodiscus_sinensis
ENSSMAG00000004252	-	89	43.716	ENSPSIG00000005603	-	68	43.316	Pelodiscus_sinensis
ENSSMAG00000004252	-	86	41.611	ENSPSIG00000003152	-	78	41.611	Pelodiscus_sinensis
ENSSMAG00000004252	-	84	38.211	ENSPSIG00000000672	-	88	38.211	Pelodiscus_sinensis
ENSSMAG00000004252	-	87	43.103	ENSPSIG00000015459	-	76	44.286	Pelodiscus_sinensis
ENSSMAG00000004252	-	93	35.452	ENSPREG00000002642	-	94	36.387	Poecilia_reticulata
ENSSMAG00000004252	-	89	47.407	ENSPNYG00000015486	-	56	49.630	Pundamilia_nyererei
ENSSMAG00000004252	-	83	44.828	ENSPNAG00000000088	-	84	44.828	Pygocentrus_nattereri
ENSSMAG00000004252	-	83	42.478	ENSPNAG00000018395	-	65	42.478	Pygocentrus_nattereri
ENSSMAG00000004252	-	84	37.931	ENSRNOG00000002713	Zfp672	94	35.468	Rattus_norvegicus
ENSSMAG00000004252	-	86	36.434	ENSSHAG00000018106	-	74	36.434	Sarcophilus_harrisii
ENSSMAG00000004252	-	89	39.623	ENSSFOG00015019818	-	77	38.535	Scleropages_formosus
ENSSMAG00000004252	-	87	45.185	ENSSPUG00000004366	-	53	45.185	Sphenodon_punctatus
ENSSMAG00000004252	-	82	41.549	ENSSPUG00000010016	-	93	39.650	Sphenodon_punctatus
ENSSMAG00000004252	-	88	38.095	ENSSPAG00000021653	-	79	41.284	Stegastes_partitus
ENSSMAG00000004252	-	82	46.789	ENSTGUG00000018351	-	100	46.789	Taeniopygia_guttata
ENSSMAG00000004252	-	83	39.167	ENSTGUG00000015210	-	100	39.167	Taeniopygia_guttata
ENSSMAG00000004252	-	85	37.576	ENSTRUG00000022066	-	93	39.286	Takifugu_rubripes
ENSSMAG00000004252	-	84	37.500	ENSXETG00000031192	-	100	35.949	Xenopus_tropicalis
ENSSMAG00000004252	-	91	38.811	ENSXCOG00000006553	-	84	43.439	Xiphophorus_couchianus
ENSSMAG00000004252	-	84	35.025	ENSXMAG00000026680	-	80	35.025	Xiphophorus_maculatus