EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000004259 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 1743 bases
Position: chr10:4993903-4995645
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000006917	zf-C2H2	PF00096.26	1.9e-17	1	3
ENSSMAP00000006917	zf-C2H2	PF00096.26	1.9e-17	2	3
ENSSMAP00000006917	zf-C2H2	PF00096.26	1.9e-17	3	3
ENSSMAP00000006917	zf-met	PF12874.7	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007002	-	576	-	ENSSMAP00000006917	191 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000004259	-	66	43.529	ENSSMAG00000004252	-	83	43.529
ENSSMAG00000004259	-	60	49.367	ENSSMAG00000005081	-	50	49.367
ENSSMAG00000004259	-	82	45.455	ENSSMAG00000014597	-	68	45.455
ENSSMAG00000004259	-	88	52.000	ENSSMAG00000013663	-	90	52.381
ENSSMAG00000004259	-	78	44.578	ENSSMAG00000021271	-	65	44.578
ENSSMAG00000004259	-	78	48.193	ENSSMAG00000006155	-	58	48.193
ENSSMAG00000004259	-	83	51.163	ENSSMAG00000019949	-	69	51.163
ENSSMAG00000004259	-	52	51.948	ENSSMAG00000006825	-	86	51.948
ENSSMAG00000004259	-	76	48.750	ENSSMAG00000021251	-	94	48.750
ENSSMAG00000004259	-	55	49.412	ENSSMAG00000015041	si:dkey-7i4.5	87	49.412
ENSSMAG00000004259	-	82	56.667	ENSSMAG00000014844	-	88	56.667
ENSSMAG00000004259	-	70	44.828	ENSSMAG00000013828	-	74	44.828
ENSSMAG00000004259	-	57	48.780	ENSSMAG00000015282	-	74	48.780
ENSSMAG00000004259	-	52	43.210	ENSSMAG00000002391	ZNF319	62	43.210
ENSSMAG00000004259	-	52	44.086	ENSSMAG00000015849	znf319b	61	44.086
ENSSMAG00000004259	-	87	59.494	ENSSMAG00000015347	-	90	59.494
ENSSMAG00000004259	-	76	48.235	ENSSMAG00000017045	-	63	48.235
ENSSMAG00000004259	-	83	45.679	ENSSMAG00000006197	-	94	49.153
ENSSMAG00000004259	-	75	44.578	ENSSMAG00000015181	gfi1b	53	44.578
ENSSMAG00000004259	-	58	48.276	ENSSMAG00000014864	-	82	48.649
ENSSMAG00000004259	-	54	49.398	ENSSMAG00000003594	-	77	48.235
ENSSMAG00000004259	-	58	48.101	ENSSMAG00000018844	prdm5	67	48.101
ENSSMAG00000004259	-	74	47.368	ENSSMAG00000009685	-	94	47.368
ENSSMAG00000004259	-	59	48.148	ENSSMAG00000007396	-	73	48.148
ENSSMAG00000004259	-	79	57.333	ENSSMAG00000015356	-	91	54.217
ENSSMAG00000004259	-	61	46.429	ENSSMAG00000009609	-	91	48.649
ENSSMAG00000004259	-	54	39.024	ENSSMAG00000008907	zbtb41	59	39.024
ENSSMAG00000004259	-	88	45.000	ENSSMAG00000009115	-	87	45.000
ENSSMAG00000004259	-	50	46.296	ENSSMAG00000013291	-	90	48.571
ENSSMAG00000004259	-	68	44.231	ENSSMAG00000005076	-	90	44.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004259	-	88	38.983	ENSAPOG00000018429	-	61	37.766	Acanthochromis_polyacanthus
ENSSMAG00000004259	-	90	48.235	ENSAPOG00000019138	-	69	48.235	Acanthochromis_polyacanthus
ENSSMAG00000004259	-	89	32.275	ENSACIG00000006826	-	80	32.275	Amphilophus_citrinellus
ENSSMAG00000004259	-	88	47.541	ENSACIG00000007464	-	75	47.541	Amphilophus_citrinellus
ENSSMAG00000004259	-	79	43.939	ENSACIG00000017892	-	83	43.939	Amphilophus_citrinellus
ENSSMAG00000004259	-	90	47.126	ENSAOCG00000016897	-	71	47.126	Amphiprion_ocellaris
ENSSMAG00000004259	-	57	44.643	ENSAOCG00000001325	-	66	44.643	Amphiprion_ocellaris
ENSSMAG00000004259	-	82	45.283	ENSAPEG00000010013	-	55	45.283	Amphiprion_percula
ENSSMAG00000004259	-	90	48.235	ENSAPEG00000001556	-	71	48.235	Amphiprion_percula
ENSSMAG00000004259	-	60	39.759	ENSATEG00000018931	-	79	44.186	Anabas_testudineus
ENSSMAG00000004259	-	94	42.169	ENSACLG00000005694	-	58	42.169	Astatotilapia_calliptera
ENSSMAG00000004259	-	85	53.165	ENSCSEG00000008528	-	63	53.165	Cynoglossus_semilaevis
ENSSMAG00000004259	-	80	40.698	ENSCSEG00000010264	-	90	40.698	Cynoglossus_semilaevis
ENSSMAG00000004259	-	55	45.783	ENSCVAG00000003250	-	63	45.783	Cyprinodon_variegatus
ENSSMAG00000004259	-	80	43.529	ENSCVAG00000006653	-	65	43.529	Cyprinodon_variegatus
ENSSMAG00000004259	-	93	48.780	ENSEBUG00000002290	-	66	48.780	Eptatretus_burgeri
ENSSMAG00000004259	-	57	46.250	ENSEBUG00000007931	-	59	46.250	Eptatretus_burgeri
ENSSMAG00000004259	-	81	51.807	ENSELUG00000024007	-	69	51.807	Esox_lucius
ENSSMAG00000004259	-	54	51.765	ENSGAFG00000008204	-	61	51.765	Gambusia_affinis
ENSSMAG00000004259	-	94	42.169	ENSHBUG00000006656	-	71	42.169	Haplochromis_burtoni
ENSSMAG00000004259	-	91	46.591	ENSHCOG00000013489	-	77	54.217	Hippocampus_comes
ENSSMAG00000004259	-	75	44.737	ENSHCOG00000008227	-	59	44.737	Hippocampus_comes
ENSSMAG00000004259	-	88	54.098	ENSHCOG00000001873	-	71	54.098	Hippocampus_comes
ENSSMAG00000004259	-	88	54.098	ENSHCOG00000008550	-	71	54.098	Hippocampus_comes
ENSSMAG00000004259	-	50	51.042	ENSHCOG00000015497	-	74	51.042	Hippocampus_comes
ENSSMAG00000004259	-	79	42.308	ENSKMAG00000014184	-	59	39.241	Kryptolebias_marmoratus
ENSSMAG00000004259	-	73	42.857	ENSKMAG00000007699	-	81	42.857	Kryptolebias_marmoratus
ENSSMAG00000004259	-	72	43.373	ENSLBEG00000001132	-	70	43.373	Labrus_bergylta
ENSSMAG00000004259	-	76	51.852	ENSLBEG00000011210	-	68	51.852	Labrus_bergylta
ENSSMAG00000004259	-	58	46.988	ENSLOCG00000004208	-	84	46.988	Lepisosteus_oculatus
ENSSMAG00000004259	-	58	41.975	ENSMAMG00000017939	-	67	43.529	Mastacembelus_armatus
ENSSMAG00000004259	-	61	37.719	ENSMZEG00005013907	-	63	37.719	Maylandia_zebra
ENSSMAG00000004259	-	59	49.206	ENSORLG00000002268	-	72	49.206	Oryzias_latipes
ENSSMAG00000004259	-	50	45.714	ENSORLG00000021885	-	82	45.783	Oryzias_latipes
ENSSMAG00000004259	-	55	39.506	ENSORLG00020018921	-	60	39.506	Oryzias_latipes_hni
ENSSMAG00000004259	-	72	39.759	ENSOMEG00000005578	-	67	39.759	Oryzias_melastigma
ENSSMAG00000004259	-	55	43.396	ENSPMGG00000007051	-	50	43.396	Periophthalmus_magnuspinnatus
ENSSMAG00000004259	-	59	54.545	ENSPMGG00000019750	-	77	54.545	Periophthalmus_magnuspinnatus
ENSSMAG00000004259	-	58	40.909	ENSPMAG00000004189	-	82	40.909	Petromyzon_marinus
ENSSMAG00000004259	-	55	45.882	ENSPFOG00000018860	-	99	45.882	Poecilia_formosa
ENSSMAG00000004259	-	63	41.860	ENSPFOG00000009491	-	62	41.860	Poecilia_formosa
ENSSMAG00000004259	-	55	45.882	ENSPLAG00000008941	-	78	45.882	Poecilia_latipinna
ENSSMAG00000004259	-	55	43.662	ENSPLAG00000014832	-	60	43.662	Poecilia_latipinna
ENSSMAG00000004259	-	55	43.662	ENSPMEG00000005210	-	60	43.662	Poecilia_mexicana
ENSSMAG00000004259	-	63	41.860	ENSPMEG00000024117	-	62	41.860	Poecilia_mexicana
ENSSMAG00000004259	-	93	40.476	ENSPREG00000002603	-	94	40.476	Poecilia_reticulata
ENSSMAG00000004259	-	88	39.665	ENSSDUG00000020774	-	59	39.665	Seriola_dumerili
ENSSMAG00000004259	-	69	37.063	ENSSDUG00000000905	-	54	37.063	Seriola_dumerili
ENSSMAG00000004259	-	56	46.835	ENSSLDG00000014436	-	70	46.835	Seriola_lalandi_dorsalis
ENSSMAG00000004259	-	57	45.283	ENSSPAG00000011544	-	51	45.283	Stegastes_partitus
ENSSMAG00000004259	-	91	33.702	ENSSPAG00000005770	-	52	33.702	Stegastes_partitus
ENSSMAG00000004259	-	59	45.652	ENSXETG00000012506	znf91	97	45.652	Xenopus_tropicalis
ENSSMAG00000004259	-	81	40.244	ENSXCOG00000003441	-	71	44.578	Xiphophorus_couchianus
ENSSMAG00000004259	-	54	44.706	ENSXCOG00000020768	-	65	44.706	Xiphophorus_couchianus
ENSSMAG00000004259	-	55	43.662	ENSXMAG00000012936	-	59	43.662	Xiphophorus_maculatus