EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000004317 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 41693 bases
Position: chr19:5794418-5836110
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000007002	Fox-1_C	PF12414.8	7.3e-36	1	1
ENSSMAP00000006981	Fox-1_C	PF12414.8	3.1e-35	1	1
ENSSMAP00000007002	RRM_1	PF00076.22	5.6e-17	1	1
ENSSMAP00000006981	RRM_1	PF00076.22	6.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007070	-	5234	-	ENSSMAP00000006981	466 (aa)	-	-
ENSSMAT00000007091	-	5028	-	ENSSMAP00000007002	417 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000004317	-	72	57.792	ENSSMAG00000015505	rbfox1	65	64.528
ENSSMAG00000004317	-	63	61.654	ENSSMAG00000013090	rbfox1l	65	62.030
ENSSMAG00000004317	-	87	51.134	ENSSMAG00000012618	rbfox3b	50	63.241
ENSSMAG00000004317	-	100	70.638	ENSSMAG00000013662	rbfox2	100	72.458
ENSSMAG00000004317	-	86	51.630	ENSSMAG00000019052	-	70	65.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004317	-	92	54.274	ENSG00000100320	RBFOX2	99	61.961	Homo_sapiens
ENSSMAG00000004317	-	100	69.280	ENSAPOG00000004877	rbfox2	100	69.767	Acanthochromis_polyacanthus
ENSSMAG00000004317	-	100	86.287	ENSAPOG00000021561	-	100	87.983	Acanthochromis_polyacanthus
ENSSMAG00000004317	-	69	63.190	ENSAMEG00000007228	RBFOX2	93	66.118	Ailuropoda_melanoleuca
ENSSMAG00000004317	-	56	69.362	ENSACIG00000001690	rbfox2	90	66.538	Amphilophus_citrinellus
ENSSMAG00000004317	-	100	71.125	ENSAOCG00000013752	rbfox2	100	71.610	Amphiprion_ocellaris
ENSSMAG00000004317	-	100	89.270	ENSAOCG00000015358	-	100	89.485	Amphiprion_ocellaris
ENSSMAG00000004317	-	100	69.280	ENSAPEG00000022359	rbfox2	100	70.464	Amphiprion_percula
ENSSMAG00000004317	-	100	89.270	ENSAPEG00000013905	-	100	89.485	Amphiprion_percula
ENSSMAG00000004317	-	100	89.270	ENSATEG00000009959	-	100	89.914	Anabas_testudineus
ENSSMAG00000004317	-	100	67.941	ENSATEG00000021951	rbfox2	100	70.190	Anabas_testudineus
ENSSMAG00000004317	-	81	57.520	ENSAPLG00000007609	RBFOX2	91	56.989	Anas_platyrhynchos
ENSSMAG00000004317	-	92	54.219	ENSACAG00000016535	RBFOX2	96	53.533	Anolis_carolinensis
ENSSMAG00000004317	-	71	62.805	ENSANAG00000015245	RBFOX2	91	66.333	Aotus_nancymaae
ENSSMAG00000004317	-	100	90.168	ENSACLG00000017380	-	100	89.688	Astatotilapia_calliptera
ENSSMAG00000004317	-	100	68.856	ENSACLG00000009744	rbfox2	100	70.042	Astatotilapia_calliptera
ENSSMAG00000004317	-	100	68.267	ENSAMXG00000011451	rbfox2	96	76.230	Astyanax_mexicanus
ENSSMAG00000004317	-	92	54.777	ENSBTAG00000020125	RBFOX2	93	57.333	Bos_taurus
ENSSMAG00000004317	-	91	54.894	ENSCJAG00000019456	-	93	56.989	Callithrix_jacchus
ENSSMAG00000004317	-	81	58.445	ENSCJAG00000038886	-	70	66.333	Callithrix_jacchus
ENSSMAG00000004317	-	81	58.713	ENSCAFG00000001701	RBFOX2	73	66.667	Canis_familiaris
ENSSMAG00000004317	-	92	50.540	ENSCAFG00020004541	RBFOX2	96	49.567	Canis_lupus_dingo
ENSSMAG00000004317	-	92	54.741	ENSCHIG00000014027	RBFOX2	96	57.349	Capra_hircus
ENSSMAG00000004317	-	87	57.895	ENSTSYG00000014123	RBFOX2	100	56.325	Carlito_syrichta
ENSSMAG00000004317	-	79	57.726	ENSCAPG00000014308	RBFOX2	87	56.598	Cavia_aperea
ENSSMAG00000004317	-	81	58.556	ENSCPOG00000022180	RBFOX2	97	56.219	Cavia_porcellus
ENSSMAG00000004317	-	92	54.777	ENSCCAG00000036584	RBFOX2	96	53.731	Cebus_capucinus
ENSSMAG00000004317	-	92	54.957	ENSCATG00000038655	RBFOX2	97	56.867	Cercocebus_atys
ENSSMAG00000004317	-	81	59.091	ENSCLAG00000017106	RBFOX2	98	57.000	Chinchilla_lanigera
ENSSMAG00000004317	-	64	55.224	ENSCSAG00000008110	RBFOX2	86	54.054	Chlorocebus_sabaeus
ENSSMAG00000004317	-	64	53.313	ENSCHOG00000002887	RBFOX2	97	52.424	Choloepus_hoffmanni
ENSSMAG00000004317	-	81	58.556	ENSCPBG00000023144	RBFOX2	96	57.796	Chrysemys_picta_bellii
ENSSMAG00000004317	-	81	58.824	ENSCANG00000035832	RBFOX2	100	56.325	Colobus_angolensis_palliatus
ENSSMAG00000004317	-	92	54.176	ENSCGRG00001017727	Rbfox2	97	53.548	Cricetulus_griseus_chok1gshd
ENSSMAG00000004317	-	81	58.556	ENSCGRG00000014237	Rbfox2	91	58.065	Cricetulus_griseus_crigri
ENSSMAG00000004317	-	100	64.930	ENSCSEG00000007748	rbfox2	100	66.200	Cynoglossus_semilaevis
ENSSMAG00000004317	-	97	87.225	ENSCSEG00000007360	-	100	85.177	Cynoglossus_semilaevis
ENSSMAG00000004317	-	88	76.127	ENSCVAG00000016503	-	99	75.597	Cyprinodon_variegatus
ENSSMAG00000004317	-	54	73.593	ENSCVAG00000004491	rbfox2	100	75.325	Cyprinodon_variegatus
ENSSMAG00000004317	-	58	73.494	ENSDARG00000052182	rbfox2	100	74.699	Danio_rerio
ENSSMAG00000004317	-	81	58.289	ENSDNOG00000004372	RBFOX2	69	66.667	Dasypus_novemcinctus
ENSSMAG00000004317	-	81	55.914	ENSDORG00000015003	Rbfox2	96	56.452	Dipodomys_ordii
ENSSMAG00000004317	-	72	66.438	ENSETEG00000005638	RBFOX2	83	65.068	Echinops_telfairi
ENSSMAG00000004317	-	92	53.978	ENSEASG00005018920	RBFOX2	96	53.978	Equus_asinus_asinus
ENSSMAG00000004317	-	92	53.978	ENSECAG00000018923	RBFOX2	96	53.978	Equus_caballus
ENSSMAG00000004317	-	79	51.724	ENSEEUG00000004549	RBFOX2	100	51.111	Erinaceus_europaeus
ENSSMAG00000004317	-	71	62.418	ENSELUG00000000102	rbfox2	100	71.311	Esox_lucius
ENSSMAG00000004317	-	100	72.311	ENSELUG00000009404	-	100	71.084	Esox_lucius
ENSSMAG00000004317	-	92	54.352	ENSFCAG00000010061	RBFOX2	96	53.305	Felis_catus
ENSSMAG00000004317	-	81	57.520	ENSFALG00000013111	RBFOX2	90	57.258	Ficedula_albicollis
ENSSMAG00000004317	-	100	70.638	ENSFHEG00000010546	rbfox2	100	71.398	Fundulus_heteroclitus
ENSSMAG00000004317	-	90	60.050	ENSGMOG00000005278	rbfox2	100	57.921	Gadus_morhua
ENSSMAG00000004317	-	63	53.311	ENSGALG00000012540	RBFOX2	75	52.881	Gallus_gallus
ENSSMAG00000004317	-	53	71.371	ENSGAFG00000017428	-	95	72.177	Gambusia_affinis
ENSSMAG00000004317	-	54	73.913	ENSGAFG00000008448	rbfox2	100	75.652	Gambusia_affinis
ENSSMAG00000004317	-	90	62.470	ENSGACG00000015968	rbfox2	100	62.892	Gasterosteus_aculeatus
ENSSMAG00000004317	-	88	68.020	ENSGACG00000007174	-	99	68.702	Gasterosteus_aculeatus
ENSSMAG00000004317	-	81	58.824	ENSGAGG00000025884	RBFOX2	91	58.065	Gopherus_agassizii
ENSSMAG00000004317	-	92	54.487	ENSGGOG00000037332	RBFOX2	96	53.518	Gorilla_gorilla
ENSSMAG00000004317	-	100	68.856	ENSHBUG00000004356	rbfox2	100	70.042	Haplochromis_burtoni
ENSSMAG00000004317	-	100	90.558	ENSHBUG00000000856	-	100	90.129	Haplochromis_burtoni
ENSSMAG00000004317	-	92	54.506	ENSHGLG00000012907	RBFOX2	99	57.108	Heterocephalus_glaber_female
ENSSMAG00000004317	-	81	59.091	ENSHGLG00100009986	RBFOX2	91	58.333	Heterocephalus_glaber_male
ENSSMAG00000004317	-	100	68.644	ENSHCOG00000016102	rbfox2	100	69.345	Hippocampus_comes
ENSSMAG00000004317	-	100	85.011	ENSHCOG00000005662	-	100	85.011	Hippocampus_comes
ENSSMAG00000004317	-	100	67.360	ENSIPUG00000016896	rbfox2	94	78.909	Ictalurus_punctatus
ENSSMAG00000004317	-	81	58.065	ENSSTOG00000014841	RBFOX2	91	58.333	Ictidomys_tridecemlineatus
ENSSMAG00000004317	-	81	58.760	ENSJJAG00000014885	Rbfox2	91	57.995	Jaculus_jaculus
ENSSMAG00000004317	-	100	70.276	ENSKMAG00000021880	-	100	70.975	Kryptolebias_marmoratus
ENSSMAG00000004317	-	100	83.255	ENSKMAG00000013354	-	100	84.652	Kryptolebias_marmoratus
ENSSMAG00000004317	-	75	54.830	ENSLACG00000003339	RBFOX2	83	54.545	Latimeria_chalumnae
ENSSMAG00000004317	-	81	57.407	ENSLAFG00000027140	RBFOX2	93	56.383	Loxodonta_africana
ENSSMAG00000004317	-	92	54.957	ENSMFAG00000031994	RBFOX2	96	56.627	Macaca_fascicularis
ENSSMAG00000004317	-	81	58.981	ENSMMUG00000014010	RBFOX2	96	57.796	Macaca_mulatta
ENSSMAG00000004317	-	92	54.487	ENSMNEG00000034388	RBFOX2	97	56.563	Macaca_nemestrina
ENSSMAG00000004317	-	81	58.713	ENSMLEG00000005854	RBFOX2	100	56.325	Mandrillus_leucophaeus
ENSSMAG00000004317	-	100	72.246	ENSMAMG00000004293	rbfox2	100	73.150	Mastacembelus_armatus
ENSSMAG00000004317	-	100	81.857	ENSMAMG00000008980	-	100	82.869	Mastacembelus_armatus
ENSSMAG00000004317	-	100	90.343	ENSMZEG00005004959	-	100	89.914	Maylandia_zebra
ENSSMAG00000004317	-	100	70.701	ENSMZEG00005023838	rbfox2	100	71.990	Maylandia_zebra
ENSSMAG00000004317	-	87	57.750	ENSMAUG00000018816	Rbfox2	91	58.065	Mesocricetus_auratus
ENSSMAG00000004317	-	92	53.911	ENSMICG00000035417	RBFOX2	96	53.079	Microcebus_murinus
ENSSMAG00000004317	-	81	58.556	ENSMOCG00000009327	Rbfox2	91	58.065	Microtus_ochrogaster
ENSSMAG00000004317	-	64	60.897	ENSMMOG00000008287	rbfox2	100	65.289	Mola_mola
ENSSMAG00000004317	-	81	56.443	ENSMODG00000001122	RBFOX2	93	54.453	Monodelphis_domestica
ENSSMAG00000004317	-	58	75.918	ENSMALG00000000623	rbfox2	100	77.551	Monopterus_albus
ENSSMAG00000004317	-	92	53.747	MGP_CAROLIEiJ_G0019957	Rbfox2	96	53.118	Mus_caroli
ENSSMAG00000004317	-	92	53.503	ENSMUSG00000033565	Rbfox2	98	51.757	Mus_musculus
ENSSMAG00000004317	-	92	53.533	MGP_PahariEiJ_G0019967	Rbfox2	96	53.017	Mus_pahari
ENSSMAG00000004317	-	92	53.747	MGP_SPRETEiJ_G0020860	Rbfox2	96	53.118	Mus_spretus
ENSSMAG00000004317	-	82	57.482	ENSMPUG00000012555	RBFOX2	97	56.325	Mustela_putorius_furo
ENSSMAG00000004317	-	81	58.005	ENSMLUG00000002676	RBFOX2	98	55.687	Myotis_lucifugus
ENSSMAG00000004317	-	81	57.527	ENSNGAG00000020528	Rbfox2	91	57.796	Nannospalax_galili
ENSSMAG00000004317	-	100	68.856	ENSNBRG00000018155	rbfox2	100	70.042	Neolamprologus_brichardi
ENSSMAG00000004317	-	82	88.512	ENSNBRG00000001568	-	88	87.990	Neolamprologus_brichardi
ENSSMAG00000004317	-	81	58.713	ENSNLEG00000034979	RBFOX2	96	56.161	Nomascus_leucogenys
ENSSMAG00000004317	-	81	55.026	ENSMEUG00000001547	RBFOX2	100	52.506	Notamacropus_eugenii
ENSSMAG00000004317	-	84	66.667	ENSOPRG00000014878	RBFOX2	82	66.667	Ochotona_princeps
ENSSMAG00000004317	-	92	55.437	ENSODEG00000009937	RBFOX2	98	56.750	Octodon_degus
ENSSMAG00000004317	-	89	60.000	ENSONIG00000017998	rbfox2	97	61.893	Oreochromis_niloticus
ENSSMAG00000004317	-	87	74.690	ENSONIG00000008341	-	99	74.755	Oreochromis_niloticus
ENSSMAG00000004317	-	61	56.250	ENSOANG00000007489	RBFOX2	86	55.245	Ornithorhynchus_anatinus
ENSSMAG00000004317	-	82	50.237	ENSOCUG00000001349	RBFOX2	97	49.524	Oryctolagus_cuniculus
ENSSMAG00000004317	-	100	67.722	ENSORLG00000028082	rbfox2	100	68.000	Oryzias_latipes
ENSSMAG00000004317	-	100	85.043	ENSORLG00000014948	-	100	85.897	Oryzias_latipes
ENSSMAG00000004317	-	100	67.932	ENSORLG00020008976	rbfox2	100	68.211	Oryzias_latipes_hni
ENSSMAG00000004317	-	100	86.325	ENSORLG00020005676	-	100	88.034	Oryzias_latipes_hni
ENSSMAG00000004317	-	100	86.538	ENSORLG00015000797	-	100	88.248	Oryzias_latipes_hsok
ENSSMAG00000004317	-	100	67.932	ENSORLG00015007027	rbfox2	100	68.211	Oryzias_latipes_hsok
ENSSMAG00000004317	-	100	68.432	ENSOMEG00000015966	rbfox2	100	68.922	Oryzias_melastigma
ENSSMAG00000004317	-	100	86.296	ENSOMEG00000007909	-	100	87.794	Oryzias_melastigma
ENSSMAG00000004317	-	81	58.355	ENSOGAG00000033250	RBFOX2	74	66.118	Otolemur_garnettii
ENSSMAG00000004317	-	81	57.067	ENSOARG00000018669	RBFOX2	73	64.570	Ovis_aries
ENSSMAG00000004317	-	81	58.713	ENSPPAG00000035653	RBFOX2	98	56.161	Pan_paniscus
ENSSMAG00000004317	-	92	54.565	ENSPPRG00000015635	RBFOX2	96	57.527	Panthera_pardus
ENSSMAG00000004317	-	81	58.201	ENSPTIG00000019147	RBFOX2	92	57.447	Panthera_tigris_altaica
ENSSMAG00000004317	-	92	54.487	ENSPTRG00000014305	RBFOX2	96	53.518	Pan_troglodytes
ENSSMAG00000004317	-	92	54.274	ENSPANG00000007030	RBFOX2	97	56.563	Papio_anubis
ENSSMAG00000004317	-	88	57.215	ENSPKIG00000010816	-	99	56.858	Paramormyrops_kingsleyae
ENSSMAG00000004317	-	100	63.347	ENSPKIG00000006854	-	100	62.076	Paramormyrops_kingsleyae
ENSSMAG00000004317	-	81	58.556	ENSPSIG00000017828	RBFOX2	91	57.796	Pelodiscus_sinensis
ENSSMAG00000004317	-	58	73.361	ENSPMGG00000007138	rbfox2	100	74.286	Periophthalmus_magnuspinnatus
ENSSMAG00000004317	-	68	80.702	ENSPMGG00000016969	-	85	77.211	Periophthalmus_magnuspinnatus
ENSSMAG00000004317	-	81	58.556	ENSPEMG00000012542	Rbfox2	91	58.065	Peromyscus_maniculatus_bairdii
ENSSMAG00000004317	-	81	57.632	ENSPCIG00000021550	RBFOX2	96	55.270	Phascolarctos_cinereus
ENSSMAG00000004317	-	78	83.483	ENSPFOG00000001869	-	100	85.846	Poecilia_formosa
ENSSMAG00000004317	-	100	69.915	ENSPFOG00000014209	rbfox2	100	70.613	Poecilia_formosa
ENSSMAG00000004317	-	57	73.967	ENSPLAG00000017308	rbfox2	100	75.203	Poecilia_latipinna
ENSSMAG00000004317	-	58	85.081	ENSPLAG00000002710	-	100	88.333	Poecilia_latipinna
ENSSMAG00000004317	-	58	74.694	ENSPMEG00000007320	rbfox2	100	76.327	Poecilia_mexicana
ENSSMAG00000004317	-	58	92.917	ENSPMEG00000013663	-	100	92.917	Poecilia_mexicana
ENSSMAG00000004317	-	58	73.469	ENSPREG00000012955	rbfox2	100	74.286	Poecilia_reticulata
ENSSMAG00000004317	-	92	54.487	ENSPPYG00000011766	RBFOX2	96	53.518	Pongo_abelii
ENSSMAG00000004317	-	81	54.813	ENSPCOG00000016273	RBFOX2	84	53.763	Propithecus_coquereli
ENSSMAG00000004317	-	56	62.132	ENSPVAG00000015844	RBFOX2	66	61.397	Pteropus_vampyrus
ENSSMAG00000004317	-	100	88.197	ENSPNYG00000020595	-	100	87.983	Pundamilia_nyererei
ENSSMAG00000004317	-	100	69.068	ENSPNYG00000016161	rbfox2	100	70.464	Pundamilia_nyererei
ENSSMAG00000004317	-	99	56.276	ENSPNAG00000014196	-	100	56.092	Pygocentrus_nattereri
ENSSMAG00000004317	-	100	62.630	ENSPNAG00000000168	rbfox2	100	62.055	Pygocentrus_nattereri
ENSSMAG00000004317	-	81	58.289	ENSRNOG00000004688	Rbfox2	97	56.145	Rattus_norvegicus
ENSSMAG00000004317	-	81	59.091	ENSRBIG00000033696	RBFOX2	91	58.333	Rhinopithecus_bieti
ENSSMAG00000004317	-	92	54.487	ENSRROG00000035715	RBFOX2	96	57.979	Rhinopithecus_roxellana
ENSSMAG00000004317	-	81	58.981	ENSSBOG00000028291	RBFOX2	99	56.971	Saimiri_boliviensis_boliviensis
ENSSMAG00000004317	-	81	58.133	ENSSHAG00000006835	RBFOX2	97	54.167	Sarcophilus_harrisii
ENSSMAG00000004317	-	100	64.226	ENSSFOG00015010482	-	100	71.835	Scleropages_formosus
ENSSMAG00000004317	-	59	73.984	ENSSFOG00015013291	-	78	75.000	Scleropages_formosus
ENSSMAG00000004317	-	100	69.703	ENSSDUG00000004292	rbfox2	100	70.675	Seriola_dumerili
ENSSMAG00000004317	-	100	89.485	ENSSDUG00000009511	-	100	90.129	Seriola_dumerili
ENSSMAG00000004317	-	84	69.458	ENSSLDG00000023983	rbfox2	86	69.533	Seriola_lalandi_dorsalis
ENSSMAG00000004317	-	100	86.498	ENSSLDG00000018052	-	100	87.768	Seriola_lalandi_dorsalis
ENSSMAG00000004317	-	63	55.254	ENSSPUG00000011797	RBFOX2	76	54.266	Sphenodon_punctatus
ENSSMAG00000004317	-	100	86.287	ENSSPAG00000016272	-	100	87.983	Stegastes_partitus
ENSSMAG00000004317	-	100	71.125	ENSSPAG00000013681	rbfox2	100	72.304	Stegastes_partitus
ENSSMAG00000004317	-	81	58.981	ENSSSCG00000000152	RBFOX2	96	56.627	Sus_scrofa
ENSSMAG00000004317	-	81	57.520	ENSTGUG00000010808	RBFOX2	93	57.527	Taeniopygia_guttata
ENSSMAG00000004317	-	88	65.816	ENSTRUG00000007739	-	97	65.816	Takifugu_rubripes
ENSSMAG00000004317	-	62	77.966	ENSTBEG00000003297	-	58	89.796	Tupaia_belangeri
ENSSMAG00000004317	-	82	57.482	ENSTTRG00000006922	RBFOX2	100	56.325	Tursiops_truncatus
ENSSMAG00000004317	-	78	56.948	ENSUAMG00000010612	RBFOX2	88	55.890	Ursus_americanus
ENSSMAG00000004317	-	61	56.597	ENSUMAG00000016785	RBFOX2	76	54.762	Ursus_maritimus
ENSSMAG00000004317	-	82	52.732	ENSVPAG00000002824	RBFOX2	100	51.551	Vicugna_pacos
ENSSMAG00000004317	-	81	58.713	ENSVVUG00000023561	RBFOX2	100	55.944	Vulpes_vulpes
ENSSMAG00000004317	-	77	58.774	ENSXETG00000000231	rbfox2	85	57.660	Xenopus_tropicalis
ENSSMAG00000004317	-	53	71.806	ENSXCOG00000013643	rbfox2	100	73.568	Xiphophorus_couchianus
ENSSMAG00000004317	-	65	97.674	ENSXCOG00000015905	-	98	66.304	Xiphophorus_couchianus
ENSSMAG00000004317	-	90	64.477	ENSXMAG00000029498	rbfox2	100	65.534	Xiphophorus_maculatus
ENSSMAG00000004317	-	100	82.265	ENSXMAG00000026769	-	100	83.333	Xiphophorus_maculatus