EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000004416 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5227 bases
Position: chr3:22861827-22867053
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000007141	MMR_HSR1	PF01926.23	8.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007233	-	2617	-	ENSSMAP00000007141	214 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000004416	-	98	40.284	ENSSMAG00000009722	rab25a	96	40.284
ENSSMAG00000004416	-	79	32.353	ENSSMAG00000001964	rhebl1	90	32.353
ENSSMAG00000004416	-	77	39.053	ENSSMAG00000011579	RAB7A	82	39.053
ENSSMAG00000004416	-	100	70.093	ENSSMAG00000021049	-	100	70.093
ENSSMAG00000004416	-	78	33.929	ENSSMAG00000004806	si:ch73-116o1.2	80	33.929
ENSSMAG00000004416	-	96	42.654	ENSSMAG00000002229	zgc:101559	84	42.654
ENSSMAG00000004416	-	100	37.838	ENSSMAG00000020311	rab42a	100	37.838
ENSSMAG00000004416	-	84	44.134	ENSSMAG00000007323	rab5c	81	44.134
ENSSMAG00000004416	-	74	37.267	ENSSMAG00000019926	rab34b	69	37.267
ENSSMAG00000004416	-	79	52.381	ENSSMAG00000002500	rab30	84	52.381
ENSSMAG00000004416	-	97	33.175	ENSSMAG00000017426	rab9a	91	33.175
ENSSMAG00000004416	-	81	48.588	ENSSMAG00000011814	rab18b	86	48.588
ENSSMAG00000004416	-	99	43.128	ENSSMAG00000016206	rab11al	96	43.128
ENSSMAG00000004416	-	82	39.429	ENSSMAG00000010140	rab22a	89	39.429
ENSSMAG00000004416	-	85	31.016	ENSSMAG00000014329	si:cabz01085950.1	92	31.016
ENSSMAG00000004416	-	79	52.976	ENSSMAG00000004133	rab11a	78	52.976
ENSSMAG00000004416	-	84	38.333	ENSSMAG00000015774	rab41	82	38.333
ENSSMAG00000004416	-	77	38.182	ENSSMAG00000007370	kras	91	37.572
ENSSMAG00000004416	-	79	49.112	ENSSMAG00000001002	rab2a	99	43.779
ENSSMAG00000004416	-	76	64.198	ENSSMAG00000000660	rab35b	90	59.563
ENSSMAG00000004416	-	74	38.889	ENSSMAG00000013945	si:dkey-13a21.4	78	38.889
ENSSMAG00000004416	-	93	40.976	ENSSMAG00000018454	-	95	40.976
ENSSMAG00000004416	-	74	36.076	ENSSMAG00000006341	rab23	87	34.831
ENSSMAG00000004416	-	100	40.000	ENSSMAG00000016183	rab25b	97	40.000
ENSSMAG00000004416	-	74	39.130	ENSSMAG00000020045	rab36	61	39.130
ENSSMAG00000004416	-	87	44.920	ENSSMAG00000005651	-	84	47.458
ENSSMAG00000004416	-	100	71.963	ENSSMAG00000009201	rab1ba	100	71.963
ENSSMAG00000004416	-	84	35.912	ENSSMAG00000014984	rras	88	35.000
ENSSMAG00000004416	-	81	58.382	ENSSMAG00000002569	-	84	58.382
ENSSMAG00000004416	-	79	43.860	ENSSMAG00000001953	rab39bb	80	43.860
ENSSMAG00000004416	-	91	40.609	ENSSMAG00000015955	rab33ba	90	37.900
ENSSMAG00000004416	-	75	50.617	ENSSMAG00000002969	rab18a	79	50.617
ENSSMAG00000004416	-	82	32.597	ENSSMAG00000013303	rheb	92	32.597
ENSSMAG00000004416	-	96	35.616	ENSSMAG00000012178	-	90	35.616
ENSSMAG00000004416	-	76	46.626	ENSSMAG00000009229	rab5aa	77	46.626
ENSSMAG00000004416	-	57	30.709	ENSSMAG00000014218	-	62	30.709
ENSSMAG00000004416	-	96	36.019	ENSSMAG00000004343	rab34a	77	36.019
ENSSMAG00000004416	-	76	37.195	ENSSMAG00000008745	hrasb	86	37.195
ENSSMAG00000004416	-	76	42.515	ENSSMAG00000013733	rab33a	61	42.515
ENSSMAG00000004416	-	99	43.128	ENSSMAG00000004922	rab11bb	96	43.128
ENSSMAG00000004416	-	79	48.521	ENSSMAG00000019773	rab15	79	48.521
ENSSMAG00000004416	-	58	31.298	ENSSMAG00000008394	arl4d	65	31.298
ENSSMAG00000004416	-	79	36.994	ENSSMAG00000006709	rab9b	82	36.994
ENSSMAG00000004416	-	99	42.180	ENSSMAG00000018613	-	96	42.180
ENSSMAG00000004416	-	94	52.239	ENSSMAG00000016376	-	100	52.239
ENSSMAG00000004416	-	98	40.553	ENSSMAG00000003166	rab14	97	40.553
ENSSMAG00000004416	-	99	47.887	ENSSMAG00000011769	si:dkey-16l2.16	92	47.887
ENSSMAG00000004416	-	80	38.068	ENSSMAG00000001414	-	75	38.068
ENSSMAG00000004416	-	81	83.815	ENSSMAG00000017528	rab1ab	100	71.495
ENSSMAG00000004416	-	72	36.478	ENSSMAG00000014078	RAB9A	79	36.478
ENSSMAG00000004416	-	80	37.209	ENSSMAG00000017205	-	79	37.209
ENSSMAG00000004416	-	73	35.220	ENSSMAG00000004606	rabl2	68	35.220
ENSSMAG00000004416	-	80	45.349	ENSSMAG00000012678	rab12	71	45.349
ENSSMAG00000004416	-	81	38.150	ENSSMAG00000000335	rab6bb	79	38.150

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004416	-	100	91.121	ENSAPOG00000004980	-	100	91.121	Acanthochromis_polyacanthus
ENSSMAG00000004416	-	100	88.785	ENSACIG00000009006	zgc:171927	100	88.785	Amphilophus_citrinellus
ENSSMAG00000004416	-	100	88.318	ENSAOCG00000024149	-	100	88.318	Amphiprion_ocellaris
ENSSMAG00000004416	-	71	87.097	ENSAOCG00000013808	-	93	95.041	Amphiprion_ocellaris
ENSSMAG00000004416	-	100	88.785	ENSAPEG00000022171	zgc:171927	99	88.785	Amphiprion_percula
ENSSMAG00000004416	-	100	89.720	ENSATEG00000003430	zgc:171927	100	89.720	Anabas_testudineus
ENSSMAG00000004416	-	100	88.785	ENSACLG00000013734	-	100	88.785	Astatotilapia_calliptera
ENSSMAG00000004416	-	100	77.209	ENSAMXG00000039486	zgc:171927	100	77.209	Astyanax_mexicanus
ENSSMAG00000004416	-	100	86.916	ENSCSEG00000014416	zgc:171927	100	86.916	Cynoglossus_semilaevis
ENSSMAG00000004416	-	100	89.720	ENSCVAG00000009222	zgc:171927	100	89.720	Cyprinodon_variegatus
ENSSMAG00000004416	-	100	77.209	ENSDARG00000033056	zgc:171927	100	77.209	Danio_rerio
ENSSMAG00000004416	-	94	82.178	ENSELUG00000011680	zgc:171927	100	78.704	Esox_lucius
ENSSMAG00000004416	-	100	89.720	ENSFHEG00000022176	zgc:171927	100	89.720	Fundulus_heteroclitus
ENSSMAG00000004416	-	98	78.673	ENSGMOG00000004979	-	97	78.673	Gadus_morhua
ENSSMAG00000004416	-	98	89.952	ENSGAFG00000015702	zgc:171927	84	89.952	Gambusia_affinis
ENSSMAG00000004416	-	100	87.383	ENSGACG00000013401	zgc:171927	99	87.383	Gasterosteus_aculeatus
ENSSMAG00000004416	-	100	88.785	ENSHBUG00000002397	-	100	88.785	Haplochromis_burtoni
ENSSMAG00000004416	-	100	87.850	ENSKMAG00000009856	zgc:171927	100	87.850	Kryptolebias_marmoratus
ENSSMAG00000004416	-	98	87.560	ENSLBEG00000027226	-	89	87.560	Labrus_bergylta
ENSSMAG00000004416	-	100	88.318	ENSLBEG00000005791	-	100	88.318	Labrus_bergylta
ENSSMAG00000004416	-	98	70.952	ENSLOCG00000014692	zgc:171927	96	70.952	Lepisosteus_oculatus
ENSSMAG00000004416	-	100	87.383	ENSMAMG00000020135	zgc:171927	100	87.383	Mastacembelus_armatus
ENSSMAG00000004416	-	100	88.785	ENSMZEG00005024685	-	100	88.785	Maylandia_zebra
ENSSMAG00000004416	-	100	87.383	ENSMMOG00000009833	-	100	87.383	Mola_mola
ENSSMAG00000004416	-	100	87.850	ENSMALG00000021129	zgc:171927	100	87.850	Monopterus_albus
ENSSMAG00000004416	-	100	88.318	ENSNBRG00000006202	zgc:171927	100	88.318	Neolamprologus_brichardi
ENSSMAG00000004416	-	100	88.318	ENSORLG00000000602	zgc:171927	100	88.318	Oryzias_latipes
ENSSMAG00000004416	-	100	88.318	ENSORLG00020021071	zgc:171927	100	88.318	Oryzias_latipes_hni
ENSSMAG00000004416	-	100	88.785	ENSORLG00015010098	zgc:171927	100	88.785	Oryzias_latipes_hsok
ENSSMAG00000004416	-	100	89.720	ENSOMEG00000020594	zgc:171927	100	89.720	Oryzias_melastigma
ENSSMAG00000004416	-	100	90.187	ENSPFOG00000013810	zgc:171927	99	90.187	Poecilia_formosa
ENSSMAG00000004416	-	100	89.720	ENSPLAG00000005869	zgc:171927	100	89.720	Poecilia_latipinna
ENSSMAG00000004416	-	100	90.187	ENSPMEG00000022350	zgc:171927	100	90.187	Poecilia_mexicana
ENSSMAG00000004416	-	100	90.654	ENSPREG00000017517	zgc:171927	100	90.654	Poecilia_reticulata
ENSSMAG00000004416	-	100	89.720	ENSPNYG00000007520	-	100	89.720	Pundamilia_nyererei
ENSSMAG00000004416	-	100	78.605	ENSPNAG00000029574	zgc:171927	100	78.605	Pygocentrus_nattereri
ENSSMAG00000004416	-	100	77.674	ENSSFOG00015005464	zgc:171927	99	77.674	Scleropages_formosus
ENSSMAG00000004416	-	100	90.187	ENSSDUG00000004445	zgc:171927	100	90.187	Seriola_dumerili
ENSSMAG00000004416	-	100	90.187	ENSSLDG00000018024	zgc:171927	100	90.187	Seriola_lalandi_dorsalis
ENSSMAG00000004416	-	100	91.589	ENSSPAG00000013533	zgc:171927	100	91.589	Stegastes_partitus
ENSSMAG00000004416	-	100	90.654	ENSXCOG00000010695	zgc:171927	100	90.654	Xiphophorus_couchianus
ENSSMAG00000004416	-	100	90.187	ENSXMAG00000004683	zgc:171927	100	90.187	Xiphophorus_maculatus