EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000004546 (Gene tree)
Gene ID
-
Gene Symbol
raver1
Alias
zgc:112236
Full Name
ribonucleoprotein%2C PTB-binding 1
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
9131 bases
Position
chr19:14048236-14057366
Accession
ZDB-GENE-050522-99
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000007350RRM_1PF00076.223.1e-2811
ENSSMAP00000007327RRM_1PF00076.223.3e-2811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000007425-3553-ENSSMAP00000007327747 (aa)--
ENSSMAT00000007447-3517-ENSSMAP00000007350735 (aa)--
Gene Model
Click here to download ENSSMAG00000004546's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004546's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000004546raver16459.524ENSSMAG00000020654raver25152.941
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000004546raver19349.802ENSG00000161847RAVER18158.974Homo_sapiens
ENSSMAG00000004546raver19887.065ENSAPOG00000017267raver19087.065Acanthochromis_polyacanthus
ENSSMAG00000004546raver19888.440ENSAOCG00000005128raver19588.440Amphiprion_ocellaris
ENSSMAG00000004546raver19888.382ENSAPEG00000010854raver19888.382Amphiprion_percula
ENSSMAG00000004546raver110087.483ENSATEG00000021004raver19887.431Anabas_testudineus
ENSSMAG00000004546raver17850.164ENSACAG00000008386-7753.774Anolis_carolinensis
ENSSMAG00000004546raver18058.984ENSANAG00000028226RAVER17758.674Aotus_nancymaae
ENSSMAG00000004546raver110084.239ENSACLG00000018492raver19484.414Astatotilapia_calliptera
ENSSMAG00000004546raver19071.176ENSAMXG00000005132raver19371.512Astyanax_mexicanus
ENSSMAG00000004546raver19350.411ENSBTAG00000015721RAVER19850.636Bos_taurus
ENSSMAG00000004546raver19350.273ENSCAFG00000017861RAVER16956.897Canis_familiaris
ENSSMAG00000004546raver19350.273ENSCAFG00020024449RAVER17156.897Canis_lupus_dingo
ENSSMAG00000004546raver15565.111ENSCHIG00000006718RAVER16765.111Capra_hircus
ENSSMAG00000004546raver15683.673ENSTSYG00000027107RAVER16770.968Carlito_syrichta
ENSSMAG00000004546raver16883.673ENSCAPG00000002269RAVER17483.673Cavia_aperea
ENSSMAG00000004546raver16558.218ENSCPOG00000001008RAVER16858.812Cavia_porcellus
ENSSMAG00000004546raver16659.677ENSCLAG00000009336RAVER16758.135Chinchilla_lanigera
ENSSMAG00000004546raver19152.209ENSCPBG00000005349-9650.941Chrysemys_picta_bellii
ENSSMAG00000004546raver19877.328ENSCSEG00000021092raver19877.193Cynoglossus_semilaevis
ENSSMAG00000004546raver110079.813ENSCVAG00000013971raver19880.272Cyprinodon_variegatus
ENSSMAG00000004546raver19969.379ENSDARG00000052617raver19869.655Danio_rerio
ENSSMAG00000004546raver15085.714ENSDNOG00000035742-6059.524Dasypus_novemcinctus
ENSSMAG00000004546raver16753.295ENSDORG00000010106-6562.060Dipodomys_ordii
ENSSMAG00000004546raver15050.674ENSETEG00000008201-5569.849Echinops_telfairi
ENSSMAG00000004546raver15167.287ENSEASG00005010544-6966.667Equus_asinus_asinus
ENSSMAG00000004546raver110076.788ENSELUG00000023287raver110076.934Esox_lucius
ENSSMAG00000004546raver15862.326ENSFCAG00000009435RAVER16962.326Felis_catus
ENSSMAG00000004546raver17283.673ENSFDAG00000015113RAVER17483.673Fukomys_damarensis
ENSSMAG00000004546raver19471.369ENSGMOG00000003649raver19972.472Gadus_morhua
ENSSMAG00000004546raver16638.788ENSGALG00000050608-5138.618Gallus_gallus
ENSSMAG00000004546raver110082.249ENSGAFG00000015944raver19882.759Gambusia_affinis
ENSSMAG00000004546raver19474.497ENSGACG00000013818raver110076.294Gasterosteus_aculeatus
ENSSMAG00000004546raver17968.919ENSGAGG00000011748-9668.919Gopherus_agassizii
ENSSMAG00000004546raver19984.131ENSHBUG00000021210raver19384.306Haplochromis_burtoni
ENSSMAG00000004546raver110077.476ENSHCOG00000000449raver19677.273Hippocampus_comes
ENSSMAG00000004546raver19768.144ENSIPUG00000013153raver19769.437Ictalurus_punctatus
ENSSMAG00000004546raver19149.461ENSJJAG00000018219-6666.582Jaculus_jaculus
ENSSMAG00000004546raver110082.745ENSKMAG00000017355raver19882.897Kryptolebias_marmoratus
ENSSMAG00000004546raver19387.206ENSLBEG00000008268raver19486.677Labrus_bergylta
ENSSMAG00000004546raver18550.072ENSLACG00000005809-8062.651Latimeria_chalumnae
ENSSMAG00000004546raver19860.700ENSLOCG00000007500raver19860.000Lepisosteus_oculatus
ENSSMAG00000004546raver16653.333ENSLAFG00000003664-8453.345Loxodonta_africana
ENSSMAG00000004546raver16059.111ENSMMUG00000014897RAVER16959.813Macaca_mulatta
ENSSMAG00000004546raver110086.122ENSMAMG00000012059raver19886.050Mastacembelus_armatus
ENSSMAG00000004546raver110084.239ENSMZEG00005019002raver19884.414Maylandia_zebra
ENSSMAG00000004546raver19350.477ENSMICG00000010326RAVER19750.640Microcebus_murinus
ENSSMAG00000004546raver110085.850ENSMMOG00000012093raver19884.807Mola_mola
ENSSMAG00000004546raver19347.318ENSMODG00000005584-8847.458Monodelphis_domestica
ENSSMAG00000004546raver110083.668ENSMALG00000016569raver19984.966Monopterus_albus
ENSSMAG00000004546raver18055.856MGP_PahariEiJ_G0014726-8160.714Mus_pahari
ENSSMAG00000004546raver18058.800ENSMPUG00000006712RAVER17960.494Mustela_putorius_furo
ENSSMAG00000004546raver16656.890ENSMLUG00000012328RAVER19649.722Myotis_lucifugus
ENSSMAG00000004546raver17956.566ENSNGAG00000001260-8059.524Nannospalax_galili
ENSSMAG00000004546raver110075.679ENSNBRG00000010139raver19876.552Neolamprologus_brichardi
ENSSMAG00000004546raver18257.874ENSNLEG00000012181RAVER17758.025Nomascus_leucogenys
ENSSMAG00000004546raver17759.121ENSMEUG00000003281-8161.905Notamacropus_eugenii
ENSSMAG00000004546raver15565.133ENSODEG00000016260RAVER16764.778Octodon_degus
ENSSMAG00000004546raver19282.991ENSONIG00000001559raver110081.232Oreochromis_niloticus
ENSSMAG00000004546raver19349.311ENSOCUG00000020918RAVER19849.309Oryctolagus_cuniculus
ENSSMAG00000004546raver110079.592ENSORLG00000005458raver19879.696Oryzias_latipes
ENSSMAG00000004546raver110080.136ENSORLG00020004392raver19880.249Oryzias_latipes_hni
ENSSMAG00000004546raver110080.272ENSORLG00015017222raver19880.387Oryzias_latipes_hsok
ENSSMAG00000004546raver110080.386ENSOMEG00000023956raver19892.453Oryzias_melastigma
ENSSMAG00000004546raver17483.673ENSOARG00000015886RAVER17383.673Ovis_aries
ENSSMAG00000004546raver15862.326ENSPPRG00000009912RAVER16962.326Panthera_pardus
ENSSMAG00000004546raver16758.696ENSPANG00000004122RAVER16657.926Papio_anubis
ENSSMAG00000004546raver19651.310ENSPCIG00000018695-8961.905Phascolarctos_cinereus
ENSSMAG00000004546raver110080.507ENSPFOG00000007016raver19880.978Poecilia_formosa
ENSSMAG00000004546raver19579.173ENSPLAG00000020793raver19779.651Poecilia_latipinna
ENSSMAG00000004546raver110080.190ENSPMEG00000011220raver19880.663Poecilia_mexicana
ENSSMAG00000004546raver110075.815ENSPREG00000006864raver19876.657Poecilia_reticulata
ENSSMAG00000004546raver19350.738ENSPPYG00000010514RAVER18250.681Pongo_abelii
ENSSMAG00000004546raver17283.673ENSPVAG00000003689RAVER17783.673Pteropus_vampyrus
ENSSMAG00000004546raver110078.668ENSPNYG00000013284raver19879.724Pundamilia_nyererei
ENSSMAG00000004546raver19870.123ENSPNAG00000015476raver19870.845Pygocentrus_nattereri
ENSSMAG00000004546raver19351.595ENSRBIG00000034702RAVER19550.560Rhinopithecus_bieti
ENSSMAG00000004546raver19351.955ENSRROG00000031186RAVER19550.700Rhinopithecus_roxellana
ENSSMAG00000004546raver19351.899ENSSBOG00000023423RAVER19550.698Saimiri_boliviensis_boliviensis
ENSSMAG00000004546raver18550.912ENSSHAG00000008181-9050.463Sarcophilus_harrisii
ENSSMAG00000004546raver110092.245ENSSDUG00000021063raver19892.265Seriola_dumerili
ENSSMAG00000004546raver110091.973ENSSLDG00000014505raver19891.989Seriola_lalandi_dorsalis
ENSSMAG00000004546raver110088.844ENSSPAG00000000688raver19888.812Stegastes_partitus
ENSSMAG00000004546raver19150.691ENSSSCG00000013650-9651.494Sus_scrofa
ENSSMAG00000004546raver19981.241ENSTRUG00000025641raver19880.414Takifugu_rubripes
ENSSMAG00000004546raver19350.273ENSVVUG00000028976RAVER16956.897Vulpes_vulpes
ENSSMAG00000004546raver19450.140ENSXETG00000011622raver19450.882Xenopus_tropicalis
ENSSMAG00000004546raver110082.361ENSXCOG00000016368raver19882.873Xiphophorus_couchianus
ENSSMAG00000004546raver110082.361ENSXMAG00000000217raver19882.873Xiphophorus_maculatus

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