EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000004627 (Gene tree)
Gene ID: -
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 23935 bases
Position: chr9:17409635-17433569
Accession: ZDB-GENE-060526-217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000007531	PAM2	PF07145.15	7.1e-06	1	1
ENSSMAP00000007488	PAM2	PF07145.15	7.5e-06	1	1
ENSSMAP00000007488	LsmAD	PF06741.13	2.2e-15	1	1
ENSSMAP00000007531	LsmAD	PF06741.13	2.3e-15	1	1
ENSSMAP00000007488	SM-ATX	PF14438.6	1.8e-20	1	1
ENSSMAP00000007531	SM-ATX	PF14438.6	5.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007628	-	7964	-	ENSSMAP00000007531	1072 (aa)	-	-
ENSSMAT00000007585	-	7883	-	ENSSMAP00000007488	1045 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004627	atxn2	96	70.667	ENSG00000204842	ATXN2	95	66.964	Homo_sapiens
ENSSMAG00000004627	atxn2	99	94.015	ENSAPOG00000014663	atxn2	99	94.015	Acanthochromis_polyacanthus
ENSSMAG00000004627	atxn2	97	70.323	ENSAMEG00000013747	ATXN2	97	57.377	Ailuropoda_melanoleuca
ENSSMAG00000004627	atxn2	99	80.801	ENSACIG00000004928	atxn2	92	92.281	Amphilophus_citrinellus
ENSSMAG00000004627	atxn2	99	93.533	ENSAOCG00000001107	atxn2	99	93.533	Amphiprion_ocellaris
ENSSMAG00000004627	atxn2	99	93.648	ENSAPEG00000020250	atxn2	99	93.090	Amphiprion_percula
ENSSMAG00000004627	atxn2	93	92.982	ENSATEG00000018587	atxn2	92	92.982	Anabas_testudineus
ENSSMAG00000004627	atxn2	100	58.506	ENSAPLG00000008724	ATXN2	97	59.016	Anas_platyrhynchos
ENSSMAG00000004627	atxn2	97	69.775	ENSACAG00000002419	ATXN2	95	67.062	Anolis_carolinensis
ENSSMAG00000004627	atxn2	97	70.382	ENSANAG00000022522	ATXN2	93	70.847	Aotus_nancymaae
ENSSMAG00000004627	atxn2	99	83.442	ENSACLG00000013359	atxn2	96	81.716	Astatotilapia_calliptera
ENSSMAG00000004627	atxn2	92	83.916	ENSAMXG00000002342	atxn2	99	72.069	Astyanax_mexicanus
ENSSMAG00000004627	atxn2	96	71.141	ENSBTAG00000022069	ATXN2	93	71.186	Bos_taurus
ENSSMAG00000004627	atxn2	97	70.219	ENSCJAG00000011756	ATXN2	93	65.085	Callithrix_jacchus
ENSSMAG00000004627	atxn2	96	70.667	ENSCAFG00000008606	ATXN2	79	56.688	Canis_familiaris
ENSSMAG00000004627	atxn2	95	71.626	ENSCAFG00020017041	ATXN2	99	57.195	Canis_lupus_dingo
ENSSMAG00000004627	atxn2	97	69.159	ENSCHIG00000012141	ATXN2	77	70.323	Capra_hircus
ENSSMAG00000004627	atxn2	96	70.323	ENSTSYG00000002717	ATXN2	93	70.847	Carlito_syrichta
ENSSMAG00000004627	atxn2	82	51.285	ENSCAPG00000013332	ATXN2	96	50.220	Cavia_aperea
ENSSMAG00000004627	atxn2	97	69.937	ENSCPOG00000001390	ATXN2	90	70.136	Cavia_porcellus
ENSSMAG00000004627	atxn2	97	70.347	ENSCCAG00000026267	ATXN2	93	70.847	Cebus_capucinus
ENSSMAG00000004627	atxn2	96	70.333	ENSCATG00000017877	ATXN2	97	63.686	Cercocebus_atys
ENSSMAG00000004627	atxn2	97	70.418	ENSCLAG00000009324	ATXN2	96	56.936	Chinchilla_lanigera
ENSSMAG00000004627	atxn2	96	70.667	ENSCSAG00000002590	ATXN2	97	63.957	Chlorocebus_sabaeus
ENSSMAG00000004627	atxn2	79	62.673	ENSCHOG00000004284	ATXN2	83	62.673	Choloepus_hoffmanni
ENSSMAG00000004627	atxn2	95	73.010	ENSCPBG00000003465	ATXN2	99	59.212	Chrysemys_picta_bellii
ENSSMAG00000004627	atxn2	96	70.645	ENSCANG00000042302	ATXN2	99	57.037	Colobus_angolensis_palliatus
ENSSMAG00000004627	atxn2	96	62.752	ENSCGRG00001022603	Atxn2	81	54.827	Cricetulus_griseus_chok1gshd
ENSSMAG00000004627	atxn2	97	70.382	ENSCGRG00000015823	Atxn2	96	57.246	Cricetulus_griseus_crigri
ENSSMAG00000004627	atxn2	100	84.535	ENSCSEG00000009072	-	99	84.837	Cynoglossus_semilaevis
ENSSMAG00000004627	atxn2	100	86.755	ENSCSEG00000018366	atxn2	99	87.368	Cynoglossus_semilaevis
ENSSMAG00000004627	atxn2	97	86.332	ENSCVAG00000020160	atxn2	99	86.680	Cyprinodon_variegatus
ENSSMAG00000004627	atxn2	100	70.868	ENSDARG00000052897	atxn2	99	62.844	Danio_rerio
ENSSMAG00000004627	atxn2	96	69.079	ENSDNOG00000015696	ATXN2	99	56.277	Dasypus_novemcinctus
ENSSMAG00000004627	atxn2	96	60.841	ENSDORG00000000808	Atxn2	97	52.732	Dipodomys_ordii
ENSSMAG00000004627	atxn2	90	60.772	ENSETEG00000005224	ATXN2	71	60.772	Echinops_telfairi
ENSSMAG00000004627	atxn2	97	70.740	ENSEASG00005012077	ATXN2	99	58.881	Equus_asinus_asinus
ENSSMAG00000004627	atxn2	97	70.833	ENSECAG00000014347	ATXN2	75	70.186	Equus_caballus
ENSSMAG00000004627	atxn2	74	69.032	ENSEEUG00000014635	-	67	71.280	Erinaceus_europaeus
ENSSMAG00000004627	atxn2	99	72.495	ENSELUG00000019632	atxn2	99	71.183	Esox_lucius
ENSSMAG00000004627	atxn2	96	71.667	ENSFCAG00000003178	ATXN2	88	70.717	Felis_catus
ENSSMAG00000004627	atxn2	100	57.313	ENSFALG00000009001	ATXN2	94	66.441	Ficedula_albicollis
ENSSMAG00000004627	atxn2	96	70.968	ENSFDAG00000020942	ATXN2	93	70.570	Fukomys_damarensis
ENSSMAG00000004627	atxn2	88	94.737	ENSFHEG00000019561	atxn2	92	94.737	Fundulus_heteroclitus
ENSSMAG00000004627	atxn2	93	83.051	ENSGMOG00000007412	atxn2	91	82.881	Gadus_morhua
ENSSMAG00000004627	atxn2	99	55.596	ENSGALG00000004625	ATXN2	93	67.893	Gallus_gallus
ENSSMAG00000004627	atxn2	94	94.386	ENSGAFG00000003302	atxn2	93	94.386	Gambusia_affinis
ENSSMAG00000004627	atxn2	96	94.218	ENSGACG00000006295	atxn2	92	94.218	Gasterosteus_aculeatus
ENSSMAG00000004627	atxn2	95	73.010	ENSGAGG00000005014	ATXN2	100	73.010	Gopherus_agassizii
ENSSMAG00000004627	atxn2	98	68.847	ENSGGOG00000002137	ATXN2	89	72.683	Gorilla_gorilla
ENSSMAG00000004627	atxn2	99	89.135	ENSHBUG00000002921	atxn2	99	89.038	Haplochromis_burtoni
ENSSMAG00000004627	atxn2	100	55.356	ENSHGLG00000009812	ATXN2	81	55.829	Heterocephalus_glaber_female
ENSSMAG00000004627	atxn2	96	70.968	ENSHGLG00100019351	ATXN2	93	70.570	Heterocephalus_glaber_male
ENSSMAG00000004627	atxn2	99	83.619	ENSHCOG00000005278	atxn2	91	87.797	Hippocampus_comes
ENSSMAG00000004627	atxn2	93	82.867	ENSIPUG00000016649	atxn2	93	82.867	Ictalurus_punctatus
ENSSMAG00000004627	atxn2	96	70.323	ENSSTOG00000000978	ATXN2	90	70.588	Ictidomys_tridecemlineatus
ENSSMAG00000004627	atxn2	94	94.386	ENSKMAG00000000980	atxn2	99	88.258	Kryptolebias_marmoratus
ENSSMAG00000004627	atxn2	59	82.714	ENSLBEG00000017484	atxn2	95	82.051	Labrus_bergylta
ENSSMAG00000004627	atxn2	100	62.066	ENSLACG00000012531	ATXN2	97	60.763	Latimeria_chalumnae
ENSSMAG00000004627	atxn2	97	79.872	ENSLOCG00000007880	atxn2	90	79.872	Lepisosteus_oculatus
ENSSMAG00000004627	atxn2	97	70.418	ENSLAFG00000007416	ATXN2	93	70.418	Loxodonta_africana
ENSSMAG00000004627	atxn2	96	70.333	ENSMFAG00000000374	ATXN2	89	72.195	Macaca_fascicularis
ENSSMAG00000004627	atxn2	95	72.664	ENSMMUG00000002226	ATXN2	89	72.195	Macaca_mulatta
ENSSMAG00000004627	atxn2	96	70.333	ENSMNEG00000035588	ATXN2	99	56.944	Macaca_nemestrina
ENSSMAG00000004627	atxn2	96	70.323	ENSMLEG00000024324	ATXN2	89	72.195	Mandrillus_leucophaeus
ENSSMAG00000004627	atxn2	99	91.313	ENSMAMG00000019160	atxn2	98	91.506	Mastacembelus_armatus
ENSSMAG00000004627	atxn2	99	89.038	ENSMZEG00005008476	atxn2	99	88.942	Maylandia_zebra
ENSSMAG00000004627	atxn2	100	58.221	ENSMGAG00000005288	ATXN2	93	70.662	Meleagris_gallopavo
ENSSMAG00000004627	atxn2	65	52.738	ENSMAUG00000008223	-	97	51.689	Mesocricetus_auratus
ENSSMAG00000004627	atxn2	95	71.280	ENSMICG00000013541	ATXN2	93	70.847	Microcebus_murinus
ENSSMAG00000004627	atxn2	81	70.233	ENSMOCG00000005219	Atxn2	96	56.572	Microtus_ochrogaster
ENSSMAG00000004627	atxn2	99	88.270	ENSMMOG00000013189	atxn2	93	93.966	Mola_mola
ENSSMAG00000004627	atxn2	98	69.565	ENSMODG00000012221	ATXN2	78	70.833	Monodelphis_domestica
ENSSMAG00000004627	atxn2	99	89.768	ENSMALG00000018529	atxn2	99	89.768	Monopterus_albus
ENSSMAG00000004627	atxn2	96	68.792	MGP_CAROLIEiJ_G0027692	Atxn2	89	68.012	Mus_caroli
ENSSMAG00000004627	atxn2	100	56.346	ENSMUSG00000042605	Atxn2	97	55.556	Mus_musculus
ENSSMAG00000004627	atxn2	88	66.346	MGP_PahariEiJ_G0024272	Atxn2	96	50.954	Mus_pahari
ENSSMAG00000004627	atxn2	100	56.436	MGP_SPRETEiJ_G0028690	Atxn2	98	55.556	Mus_spretus
ENSSMAG00000004627	atxn2	97	64.194	ENSMPUG00000002212	ATXN2	97	55.829	Mustela_putorius_furo
ENSSMAG00000004627	atxn2	100	56.886	ENSMLUG00000015559	ATXN2	97	57.104	Myotis_lucifugus
ENSSMAG00000004627	atxn2	94	91.579	ENSNBRG00000015794	atxn2	99	85.261	Neolamprologus_brichardi
ENSSMAG00000004627	atxn2	96	70.667	ENSNLEG00000000484	ATXN2	89	72.683	Nomascus_leucogenys
ENSSMAG00000004627	atxn2	87	80.000	ENSMEUG00000012244	-	83	80.000	Notamacropus_eugenii
ENSSMAG00000004627	atxn2	96	62.081	ENSOPRG00000014599	ATXN2	98	54.595	Ochotona_princeps
ENSSMAG00000004627	atxn2	95	70.588	ENSODEG00000010798	ATXN2	99	56.597	Octodon_degus
ENSSMAG00000004627	atxn2	96	92.283	ENSONIG00000014521	atxn2	91	92.283	Oreochromis_niloticus
ENSSMAG00000004627	atxn2	82	78.981	ENSOANG00000004796	ATXN2	99	56.774	Ornithorhynchus_anatinus
ENSSMAG00000004627	atxn2	97	69.132	ENSOCUG00000002855	ATXN2	66	68.770	Oryctolagus_cuniculus
ENSSMAG00000004627	atxn2	93	90.526	ENSORLG00000003606	atxn2	99	90.526	Oryzias_latipes
ENSSMAG00000004627	atxn2	93	90.526	ENSORLG00020000785	atxn2	94	90.526	Oryzias_latipes_hni
ENSSMAG00000004627	atxn2	99	83.671	ENSORLG00015012345	atxn2	93	90.526	Oryzias_latipes_hsok
ENSSMAG00000004627	atxn2	93	91.579	ENSOMEG00000020080	atxn2	94	91.579	Oryzias_melastigma
ENSSMAG00000004627	atxn2	96	70.000	ENSOGAG00000000609	ATXN2	78	69.565	Otolemur_garnettii
ENSSMAG00000004627	atxn2	97	70.607	ENSOARG00000018223	ATXN2	93	70.219	Ovis_aries
ENSSMAG00000004627	atxn2	97	70.701	ENSPPAG00000028043	ATXN2	89	72.683	Pan_paniscus
ENSSMAG00000004627	atxn2	96	71.000	ENSPPRG00000003573	ATXN2	88	70.093	Panthera_pardus
ENSSMAG00000004627	atxn2	95	71.626	ENSPTIG00000021122	ATXN2	93	71.186	Panthera_tigris_altaica
ENSSMAG00000004627	atxn2	98	68.847	ENSPTRG00000029540	ATXN2	89	72.683	Pan_troglodytes
ENSSMAG00000004627	atxn2	96	70.805	ENSPANG00000017168	ATXN2	89	72.195	Papio_anubis
ENSSMAG00000004627	atxn2	97	72.754	ENSPKIG00000023134	atxn2	99	71.126	Paramormyrops_kingsleyae
ENSSMAG00000004627	atxn2	100	57.966	ENSPSIG00000002353	-	97	58.106	Pelodiscus_sinensis
ENSSMAG00000004627	atxn2	95	88.421	ENSPMGG00000005074	atxn2	93	88.421	Periophthalmus_magnuspinnatus
ENSSMAG00000004627	atxn2	81	70.698	ENSPEMG00000015340	Atxn2	90	70.136	Peromyscus_maniculatus_bairdii
ENSSMAG00000004627	atxn2	97	38.689	ENSPMAG00000004603	atxn2	97	39.476	Petromyzon_marinus
ENSSMAG00000004627	atxn2	66	53.401	ENSPMAG00000007157	atxn2	82	53.401	Petromyzon_marinus
ENSSMAG00000004627	atxn2	56	74.176	ENSPCIG00000006165	-	89	73.404	Phascolarctos_cinereus
ENSSMAG00000004627	atxn2	100	75.349	ENSPFOG00000005857	atxn2	99	77.926	Poecilia_formosa
ENSSMAG00000004627	atxn2	93	94.386	ENSPLAG00000015241	atxn2	93	94.386	Poecilia_latipinna
ENSSMAG00000004627	atxn2	95	94.386	ENSPMEG00000016681	atxn2	93	94.386	Poecilia_mexicana
ENSSMAG00000004627	atxn2	95	93.684	ENSPREG00000014825	atxn2	93	93.684	Poecilia_reticulata
ENSSMAG00000004627	atxn2	96	70.333	ENSPPYG00000004963	ATXN2	81	69.876	Pongo_abelii
ENSSMAG00000004627	atxn2	94	69.258	ENSPCOG00000022031	ATXN2	93	69.615	Propithecus_coquereli
ENSSMAG00000004627	atxn2	96	70.667	ENSPVAG00000013179	ATXN2	76	69.876	Pteropus_vampyrus
ENSSMAG00000004627	atxn2	60	74.601	ENSPNYG00000016981	atxn2	98	73.194	Pundamilia_nyererei
ENSSMAG00000004627	atxn2	100	75.377	ENSPNAG00000010889	atxn2	99	72.624	Pygocentrus_nattereri
ENSSMAG00000004627	atxn2	97	69.427	ENSRNOG00000001256	Atxn2	95	56.506	Rattus_norvegicus
ENSSMAG00000004627	atxn2	96	68.000	ENSRBIG00000039212	ATXN2	89	72.683	Rhinopithecus_bieti
ENSSMAG00000004627	atxn2	97	70.701	ENSRROG00000031170	ATXN2	91	71.186	Rhinopithecus_roxellana
ENSSMAG00000004627	atxn2	95	71.280	ENSSBOG00000031563	ATXN2	93	70.847	Saimiri_boliviensis_boliviensis
ENSSMAG00000004627	atxn2	100	56.783	ENSSHAG00000007304	ATXN2	97	57.636	Sarcophilus_harrisii
ENSSMAG00000004627	atxn2	95	80.351	ENSSFOG00015017229	atxn2	99	63.148	Scleropages_formosus
ENSSMAG00000004627	atxn2	100	92.488	ENSSDUG00000001223	atxn2	97	94.197	Seriola_dumerili
ENSSMAG00000004627	atxn2	99	81.810	ENSSLDG00000019837	atxn2	99	82.084	Seriola_lalandi_dorsalis
ENSSMAG00000004627	atxn2	71	69.737	ENSSARG00000006291	ATXN2	69	68.860	Sorex_araneus
ENSSMAG00000004627	atxn2	100	57.296	ENSSPUG00000010317	ATXN2	87	70.000	Sphenodon_punctatus
ENSSMAG00000004627	atxn2	99	93.936	ENSSPAG00000000377	atxn2	98	93.919	Stegastes_partitus
ENSSMAG00000004627	atxn2	96	70.418	ENSSSCG00000009834	ATXN2	93	58.301	Sus_scrofa
ENSSMAG00000004627	atxn2	92	72.318	ENSTGUG00000006497	ATXN2	99	58.144	Taeniopygia_guttata
ENSSMAG00000004627	atxn2	99	91.228	ENSTRUG00000016801	atxn2	94	91.259	Takifugu_rubripes
ENSSMAG00000004627	atxn2	87	67.544	ENSTBEG00000001985	ATXN2	83	67.544	Tupaia_belangeri
ENSSMAG00000004627	atxn2	84	67.333	ENSTTRG00000000952	ATXN2	73	60.357	Tursiops_truncatus
ENSSMAG00000004627	atxn2	96	70.667	ENSUAMG00000025295	ATXN2	91	57.195	Ursus_americanus
ENSSMAG00000004627	atxn2	95	71.626	ENSUMAG00000007315	ATXN2	99	57.195	Ursus_maritimus
ENSSMAG00000004627	atxn2	87	71.223	ENSVPAG00000005940	ATXN2	89	59.322	Vicugna_pacos
ENSSMAG00000004627	atxn2	95	71.626	ENSVVUG00000016107	ATXN2	99	57.286	Vulpes_vulpes
ENSSMAG00000004627	atxn2	95	67.320	ENSXETG00000020912	atxn2	98	56.534	Xenopus_tropicalis
ENSSMAG00000004627	atxn2	59	79.058	ENSXCOG00000010001	atxn2	98	78.311	Xiphophorus_couchianus
ENSSMAG00000004627	atxn2	95	94.035	ENSXMAG00000003481	atxn2	93	94.035	Xiphophorus_maculatus