EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000004641 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpa1a
Alias: zgc:66127
Full Name: heterogeneous nuclear ribonucleoprotein A1a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5011 bases
Position: chr11:13475533-13480543
Accession: ZDB-GENE-040426-1546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000007514	RRM_1	PF00076.22	2.1e-35	1	2
ENSSMAP00000007514	RRM_1	PF00076.22	2.1e-35	2	2
ENSSMAP00000007547	RRM_1	PF00076.22	2.2e-35	1	2
ENSSMAP00000007547	RRM_1	PF00076.22	2.2e-35	2	2
ENSSMAP00000007521	RRM_1	PF00076.22	3.2e-35	1	2
ENSSMAP00000007521	RRM_1	PF00076.22	3.2e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007644	-	1125	-	ENSSMAP00000007547	312 (aa)	-	-
ENSSMAT00000007611	-	924	-	ENSSMAP00000007514	307 (aa)	-	-
ENSSMAT00000007618	-	1224	-	ENSSMAP00000007521	345 (aa)	-	A0A2U9C3T7

Gene Model

Click here to download ENSSMAG00000004641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000004641	hnrnpa1a	57	54.545	ENSSMAG00000010246	-	79	54.237
ENSSMAG00000004641	hnrnpa1a	58	40.678	ENSSMAG00000009686	hnrnpd	56	40.437
ENSSMAG00000004641	hnrnpa1a	66	40.909	ENSSMAG00000018484	msi2a	57	41.860
ENSSMAG00000004641	hnrnpa1a	72	37.019	ENSSMAG00000018824	MSI1	59	37.640
ENSSMAG00000004641	hnrnpa1a	88	34.286	ENSSMAG00000017715	tardbpl	56	31.429
ENSSMAG00000004641	hnrnpa1a	81	38.647	ENSSMAG00000003760	hnrnpaba	74	37.912
ENSSMAG00000004641	hnrnpa1a	58	57.229	ENSSMAG00000010279	-	93	57.229
ENSSMAG00000004641	hnrnpa1a	60	37.500	ENSSMAG00000021047	dazap1	52	38.372

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004641	hnrnpa1a	92	75.862	ENSAPOG00000019369	-	64	91.943	Acanthochromis_polyacanthus
ENSSMAG00000004641	hnrnpa1a	58	53.933	ENSACIG00000021815	-	87	53.933	Amphilophus_citrinellus
ENSSMAG00000004641	hnrnpa1a	90	76.636	ENSAOCG00000005289	-	63	91.943	Amphiprion_ocellaris
ENSSMAG00000004641	hnrnpa1a	90	76.636	ENSAPEG00000004179	-	63	91.943	Amphiprion_percula
ENSSMAG00000004641	hnrnpa1a	57	57.500	ENSATEG00000003423	-	76	57.500	Anabas_testudineus
ENSSMAG00000004641	hnrnpa1a	69	88.688	ENSATEG00000022918	hnrnpa1a	88	92.021	Anabas_testudineus
ENSSMAG00000004641	hnrnpa1a	59	54.945	ENSACAG00000017109	-	67	50.459	Anolis_carolinensis
ENSSMAG00000004641	hnrnpa1a	97	74.118	ENSACLG00000006940	-	64	89.252	Astatotilapia_calliptera
ENSSMAG00000004641	hnrnpa1a	70	61.582	ENSAMXG00000037730	-	53	61.453	Astyanax_mexicanus
ENSSMAG00000004641	hnrnpa1a	60	82.162	ENSAMXG00000006296	hnrnpa1a	65	68.724	Astyanax_mexicanus
ENSSMAG00000004641	hnrnpa1a	59	53.073	ENSCSEG00000014051	-	73	52.542	Cynoglossus_semilaevis
ENSSMAG00000004641	hnrnpa1a	89	78.305	ENSCSEG00000007589	hnrnpa1a	68	92.391	Cynoglossus_semilaevis
ENSSMAG00000004641	hnrnpa1a	90	80.189	ENSCVAG00000012637	hnrnpa1a	62	91.469	Cyprinodon_variegatus
ENSSMAG00000004641	hnrnpa1a	61	80.645	ENSDARG00000011020	hnrnpa1a	57	72.851	Danio_rerio
ENSSMAG00000004641	hnrnpa1a	63	54.359	ENSDORG00000026425	-	53	55.249	Dipodomys_ordii
ENSSMAG00000004641	hnrnpa1a	63	88.601	ENSELUG00000007372	-	51	89.617	Esox_lucius
ENSSMAG00000004641	hnrnpa1a	60	59.444	ENSGMOG00000020353	-	95	59.444	Gadus_morhua
ENSSMAG00000004641	hnrnpa1a	73	47.368	ENSGAFG00000016803	-	54	53.073	Gambusia_affinis
ENSSMAG00000004641	hnrnpa1a	90	79.560	ENSGAFG00000007751	-	62	90.995	Gambusia_affinis
ENSSMAG00000004641	hnrnpa1a	77	80.328	ENSGACG00000009435	-	55	88.690	Gasterosteus_aculeatus
ENSSMAG00000004641	hnrnpa1a	97	75.000	ENSHBUG00000005647	hnrnpa1a	64	89.252	Haplochromis_burtoni
ENSSMAG00000004641	hnrnpa1a	60	84.699	ENSIPUG00000002023	hnrnpa1a	75	85.143	Ictalurus_punctatus
ENSSMAG00000004641	hnrnpa1a	69	76.777	ENSIPUG00000022440	-	72	82.635	Ictalurus_punctatus
ENSSMAG00000004641	hnrnpa1a	60	60.674	ENSIPUG00000001991	-	77	60.674	Ictalurus_punctatus
ENSSMAG00000004641	hnrnpa1a	99	76.880	ENSKMAG00000020859	-	89	76.667	Kryptolebias_marmoratus
ENSSMAG00000004641	hnrnpa1a	91	75.758	ENSLBEG00000010010	hnrnpa1a	61	90.654	Labrus_bergylta
ENSSMAG00000004641	hnrnpa1a	60	70.811	ENSMFAG00000028351	-	54	70.811	Macaca_fascicularis
ENSSMAG00000004641	hnrnpa1a	90	76.161	ENSMAMG00000007606	-	62	91.429	Mastacembelus_armatus
ENSSMAG00000004641	hnrnpa1a	97	74.118	ENSMZEG00005027173	hnrnpa1a	64	89.252	Maylandia_zebra
ENSSMAG00000004641	hnrnpa1a	83	74.564	ENSMMOG00000008251	hnrnpa1a	85	88.293	Mola_mola
ENSSMAG00000004641	hnrnpa1a	58	54.802	ENSMALG00000008886	-	86	54.494	Monopterus_albus
ENSSMAG00000004641	hnrnpa1a	91	78.154	ENSMALG00000014091	hnrnpa1a	61	91.429	Monopterus_albus
ENSSMAG00000004641	hnrnpa1a	97	74.706	ENSNBRG00000018441	-	64	89.252	Neolamprologus_brichardi
ENSSMAG00000004641	hnrnpa1a	59	59.091	ENSNBRG00000014469	-	82	59.091	Neolamprologus_brichardi
ENSSMAG00000004641	hnrnpa1a	90	80.442	ENSORLG00000008001	-	74	94.413	Oryzias_latipes
ENSSMAG00000004641	hnrnpa1a	61	48.925	ENSORLG00000029240	-	91	51.429	Oryzias_latipes
ENSSMAG00000004641	hnrnpa1a	88	42.958	ENSORLG00020006043	-	59	50.867	Oryzias_latipes_hni
ENSSMAG00000004641	hnrnpa1a	65	50.000	ENSORLG00020022498	-	85	50.857	Oryzias_latipes_hni
ENSSMAG00000004641	hnrnpa1a	90	80.442	ENSORLG00020006582	hnrnpa1a	96	91.220	Oryzias_latipes_hni
ENSSMAG00000004641	hnrnpa1a	90	80.126	ENSORLG00015022294	-	74	93.855	Oryzias_latipes_hsok
ENSSMAG00000004641	hnrnpa1a	91	81.620	ENSOMEG00000015959	-	64	92.453	Oryzias_melastigma
ENSSMAG00000004641	hnrnpa1a	71	56.354	ENSPMGG00000016392	-	93	56.983	Periophthalmus_magnuspinnatus
ENSSMAG00000004641	hnrnpa1a	88	75.824	ENSPMGG00000011804	hnrnpa1a	68	92.935	Periophthalmus_magnuspinnatus
ENSSMAG00000004641	hnrnpa1a	94	79.091	ENSPFOG00000001825	-	62	90.995	Poecilia_formosa
ENSSMAG00000004641	hnrnpa1a	94	79.091	ENSPMEG00000002425	-	62	90.995	Poecilia_mexicana
ENSSMAG00000004641	hnrnpa1a	59	59.091	ENSPNYG00000020729	-	90	59.091	Pundamilia_nyererei
ENSSMAG00000004641	hnrnpa1a	60	83.422	ENSPNAG00000021630	-	57	84.270	Pygocentrus_nattereri
ENSSMAG00000004641	hnrnpa1a	64	80.000	ENSPNAG00000007752	hnrnpa1a	73	83.516	Pygocentrus_nattereri
ENSSMAG00000004641	hnrnpa1a	58	59.649	ENSSDUG00000002431	-	83	58.286	Seriola_dumerili
ENSSMAG00000004641	hnrnpa1a	89	95.597	ENSSDUG00000013908	hnrnpa1a	83	93.820	Seriola_dumerili
ENSSMAG00000004641	hnrnpa1a	89	94.022	ENSSLDG00000003718	hnrnpa1a	86	88.095	Seriola_lalandi_dorsalis
ENSSMAG00000004641	hnrnpa1a	91	79.624	ENSSPAG00000018518	-	64	90.995	Stegastes_partitus
ENSSMAG00000004641	hnrnpa1a	71	84.444	ENSTRUG00000020491	-	65	87.678	Takifugu_rubripes
ENSSMAG00000004641	hnrnpa1a	70	59.890	ENSTNIG00000007398	-	80	59.777	Tetraodon_nigroviridis
ENSSMAG00000004641	hnrnpa1a	80	81.496	ENSXCOG00000009001	-	90	87.560	Xiphophorus_couchianus
ENSSMAG00000004641	hnrnpa1a	89	76.471	ENSXMAG00000008076	-	90	75.490	Xiphophorus_maculatus