EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000004671 (Gene tree)
Gene ID: -
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like neuron-specific RNA binding protein 3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 15169 bases
Position: chr19:14118719-14133887
Accession: ZDB-GENE-980526-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000007594	RRM_5	PF13893.6	1.5e-12	1	2
ENSSMAP00000007594	RRM_5	PF13893.6	1.5e-12	2	2
ENSSMAP00000007565	RRM_5	PF13893.6	4.6e-12	1	2
ENSSMAP00000007565	RRM_5	PF13893.6	4.6e-12	2	2
ENSSMAP00000007594	RRM_1	PF00076.22	1.4e-64	1	3
ENSSMAP00000007594	RRM_1	PF00076.22	1.4e-64	2	3
ENSSMAP00000007594	RRM_1	PF00076.22	1.4e-64	3	3
ENSSMAP00000007565	RRM_1	PF00076.22	6e-63	1	3
ENSSMAP00000007565	RRM_1	PF00076.22	6e-63	2	3
ENSSMAP00000007565	RRM_1	PF00076.22	6e-63	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007662	-	4418	-	ENSSMAP00000007565	384 (aa)	-	-
ENSSMAT00000007693	-	1032	-	ENSSMAP00000007594	343 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000004671	elavl3	68	36.667	ENSSMAG00000003683	rbms2a	51	36.667
ENSSMAG00000004671	elavl3	78	37.349	ENSSMAG00000010803	pabpc1a	59	37.349
ENSSMAG00000004671	elavl3	100	80.874	ENSSMAG00000006881	elavl4	96	80.163
ENSSMAG00000004671	elavl3	90	37.179	ENSSMAG00000020230	-	73	37.179
ENSSMAG00000004671	elavl3	88	35.632	ENSSMAG00000002478	celf3a	98	35.632
ENSSMAG00000004671	elavl3	68	38.571	ENSSMAG00000012152	RBMS1	54	33.846
ENSSMAG00000004671	elavl3	66	34.641	ENSSMAG00000004221	rbms2b	50	33.498
ENSSMAG00000004671	elavl3	91	67.203	ENSSMAG00000014353	-	86	67.203
ENSSMAG00000004671	elavl3	82	41.860	ENSSMAG00000009331	celf4	70	34.375
ENSSMAG00000004671	elavl3	65	35.802	ENSSMAG00000020065	-	66	35.000
ENSSMAG00000004671	elavl3	66	37.179	ENSSMAG00000011347	tia1l	89	37.179
ENSSMAG00000004671	elavl3	52	32.787	ENSSMAG00000012722	rbms1a	67	30.417
ENSSMAG00000004671	elavl3	92	37.349	ENSSMAG00000006869	pabpc1b	59	37.349
ENSSMAG00000004671	elavl3	99	78.846	ENSSMAG00000010745	ELAVL2	94	78.846
ENSSMAG00000004671	elavl3	84	41.304	ENSSMAG00000008925	-	69	41.304
ENSSMAG00000004671	elavl3	61	37.179	ENSSMAG00000012671	tial1	85	37.179
ENSSMAG00000004671	elavl3	90	72.204	ENSSMAG00000014763	elavl1a	90	72.204
ENSSMAG00000004671	elavl3	81	42.105	ENSSMAG00000013827	celf1	89	31.868
ENSSMAG00000004671	elavl3	60	34.146	ENSSMAG00000010516	pabpc1l	92	34.146
ENSSMAG00000004671	elavl3	75	41.860	ENSSMAG00000015634	celf3b	56	41.860
ENSSMAG00000004671	elavl3	90	40.698	ENSSMAG00000011707	celf5a	85	33.645
ENSSMAG00000004671	elavl3	76	43.023	ENSSMAG00000008985	-	66	35.065
ENSSMAG00000004671	elavl3	90	40.698	ENSSMAG00000008575	-	64	40.698

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004671	elavl3	99	85.674	ENSG00000196361	ELAVL3	99	86.798	Homo_sapiens
ENSSMAG00000004671	elavl3	99	99.123	ENSAPOG00000017565	elavl3	99	99.123	Acanthochromis_polyacanthus
ENSSMAG00000004671	elavl3	99	85.674	ENSAMEG00000010487	ELAVL3	99	86.798	Ailuropoda_melanoleuca
ENSSMAG00000004671	elavl3	99	99.123	ENSACIG00000024190	elavl3	99	99.123	Amphilophus_citrinellus
ENSSMAG00000004671	elavl3	99	99.123	ENSAOCG00000005054	elavl3	99	99.123	Amphiprion_ocellaris
ENSSMAG00000004671	elavl3	99	99.123	ENSAPEG00000011145	elavl3	99	99.123	Amphiprion_percula
ENSSMAG00000004671	elavl3	99	99.705	ENSATEG00000020941	elavl3	99	99.705	Anabas_testudineus
ENSSMAG00000004671	elavl3	99	88.333	ENSACAG00000016958	ELAVL3	93	88.333	Anolis_carolinensis
ENSSMAG00000004671	elavl3	99	85.674	ENSANAG00000030798	ELAVL3	99	86.798	Aotus_nancymaae
ENSSMAG00000004671	elavl3	99	99.123	ENSACLG00000018260	elavl3	99	99.123	Astatotilapia_calliptera
ENSSMAG00000004671	elavl3	99	99.706	ENSAMXG00000040498	elavl3	99	99.706	Astyanax_mexicanus
ENSSMAG00000004671	elavl3	99	85.955	ENSBTAG00000014412	ELAVL3	99	87.079	Bos_taurus
ENSSMAG00000004671	elavl3	99	84.022	ENSCJAG00000005589	ELAVL3	99	85.124	Callithrix_jacchus
ENSSMAG00000004671	elavl3	99	84.022	ENSCAFG00000017350	ELAVL3	99	85.124	Canis_familiaris
ENSSMAG00000004671	elavl3	99	88.921	ENSCAFG00020004614	ELAVL3	97	90.087	Canis_lupus_dingo
ENSSMAG00000004671	elavl3	99	84.298	ENSCHIG00000003436	ELAVL3	99	85.399	Capra_hircus
ENSSMAG00000004671	elavl3	99	84.022	ENSTSYG00000036621	ELAVL3	99	85.124	Carlito_syrichta
ENSSMAG00000004671	elavl3	90	70.988	ENSCAPG00000017620	ELAVL3	99	72.222	Cavia_aperea
ENSSMAG00000004671	elavl3	90	70.988	ENSCPOG00000001793	ELAVL3	99	72.222	Cavia_porcellus
ENSSMAG00000004671	elavl3	99	85.434	ENSCCAG00000034350	ELAVL3	99	86.555	Cebus_capucinus
ENSSMAG00000004671	elavl3	99	84.022	ENSCATG00000044086	ELAVL3	99	85.124	Cercocebus_atys
ENSSMAG00000004671	elavl3	99	83.747	ENSCLAG00000016404	ELAVL3	99	84.848	Chinchilla_lanigera
ENSSMAG00000004671	elavl3	96	90.870	ENSCSAG00000006755	ELAVL3	100	90.870	Chlorocebus_sabaeus
ENSSMAG00000004671	elavl3	99	91.837	ENSCPBG00000023982	ELAVL3	99	88.483	Chrysemys_picta_bellii
ENSSMAG00000004671	elavl3	99	85.434	ENSCANG00000038728	ELAVL3	99	86.555	Colobus_angolensis_palliatus
ENSSMAG00000004671	elavl3	99	83.471	ENSCGRG00001018927	Elavl3	99	84.573	Cricetulus_griseus_chok1gshd
ENSSMAG00000004671	elavl3	99	83.471	ENSCGRG00000007158	Elavl3	99	84.573	Cricetulus_griseus_crigri
ENSSMAG00000004671	elavl3	100	99.130	ENSCSEG00000021095	elavl3	100	99.130	Cynoglossus_semilaevis
ENSSMAG00000004671	elavl3	99	99.123	ENSCVAG00000014060	elavl3	99	99.123	Cyprinodon_variegatus
ENSSMAG00000004671	elavl3	99	98.830	ENSDARG00000014420	elavl3	98	100.000	Danio_rerio
ENSSMAG00000004671	elavl3	99	83.989	ENSDORG00000002538	Elavl3	99	85.112	Dipodomys_ordii
ENSSMAG00000004671	elavl3	99	84.022	ENSEASG00005004561	ELAVL3	99	85.124	Equus_asinus_asinus
ENSSMAG00000004671	elavl3	99	89.676	ENSECAG00000020594	ELAVL3	100	90.855	Equus_caballus
ENSSMAG00000004671	elavl3	99	97.399	ENSELUG00000023043	elavl3	100	95.908	Esox_lucius
ENSSMAG00000004671	elavl3	99	84.022	ENSFCAG00000024763	ELAVL3	99	85.124	Felis_catus
ENSSMAG00000004671	elavl3	100	89.076	ENSFDAG00000008449	ELAVL3	100	89.076	Fukomys_damarensis
ENSSMAG00000004671	elavl3	99	99.123	ENSFHEG00000001675	elavl3	99	99.123	Fundulus_heteroclitus
ENSSMAG00000004671	elavl3	99	95.211	ENSGMOG00000003760	elavl3	99	95.211	Gadus_morhua
ENSSMAG00000004671	elavl3	50	61.667	ENSGALG00000054488	-	77	63.636	Gallus_gallus
ENSSMAG00000004671	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSSMAG00000004671	elavl3	99	95.493	ENSGAFG00000016015	elavl3	98	95.493	Gambusia_affinis
ENSSMAG00000004671	elavl3	99	96.562	ENSGACG00000013839	elavl3	99	96.562	Gasterosteus_aculeatus
ENSSMAG00000004671	elavl3	84	91.379	ENSGAGG00000016141	ELAVL3	95	91.379	Gopherus_agassizii
ENSSMAG00000004671	elavl3	99	84.022	ENSGGOG00000008635	ELAVL3	99	85.124	Gorilla_gorilla
ENSSMAG00000004671	elavl3	99	99.123	ENSHBUG00000020978	elavl3	99	99.123	Haplochromis_burtoni
ENSSMAG00000004671	elavl3	84	67.361	ENSHGLG00000019379	-	97	67.361	Heterocephalus_glaber_female
ENSSMAG00000004671	elavl3	99	84.022	ENSHGLG00000015199	ELAVL3	99	85.124	Heterocephalus_glaber_female
ENSSMAG00000004671	elavl3	94	82.319	ENSHGLG00100011200	ELAVL3	99	83.478	Heterocephalus_glaber_male
ENSSMAG00000004671	elavl3	99	96.848	ENSHCOG00000015894	elavl3	99	96.848	Hippocampus_comes
ENSSMAG00000004671	elavl3	99	98.830	ENSIPUG00000013002	elavl3	98	98.830	Ictalurus_punctatus
ENSSMAG00000004671	elavl3	99	84.022	ENSSTOG00000021111	ELAVL3	99	85.124	Ictidomys_tridecemlineatus
ENSSMAG00000004671	elavl3	99	84.848	ENSJJAG00000023513	Elavl3	99	84.848	Jaculus_jaculus
ENSSMAG00000004671	elavl3	99	99.123	ENSKMAG00000017412	elavl3	99	99.123	Kryptolebias_marmoratus
ENSSMAG00000004671	elavl3	99	99.123	ENSLBEG00000008073	elavl3	100	97.396	Labrus_bergylta
ENSSMAG00000004671	elavl3	100	92.708	ENSLOCG00000007647	elavl3	100	92.708	Lepisosteus_oculatus
ENSSMAG00000004671	elavl3	99	83.791	ENSLAFG00000005013	ELAVL3	99	84.890	Loxodonta_africana
ENSSMAG00000004671	elavl3	99	85.434	ENSMFAG00000003692	ELAVL3	99	86.555	Macaca_fascicularis
ENSSMAG00000004671	elavl3	99	85.434	ENSMMUG00000020616	ELAVL3	99	86.555	Macaca_mulatta
ENSSMAG00000004671	elavl3	99	85.434	ENSMNEG00000043973	ELAVL3	99	86.555	Macaca_nemestrina
ENSSMAG00000004671	elavl3	97	83.128	ENSMLEG00000013976	ELAVL3	99	83.128	Mandrillus_leucophaeus
ENSSMAG00000004671	elavl3	100	99.125	ENSMAMG00000011697	elavl3	100	99.125	Mastacembelus_armatus
ENSSMAG00000004671	elavl3	99	99.123	ENSMZEG00005019053	elavl3	99	99.123	Maylandia_zebra
ENSSMAG00000004671	elavl3	99	83.471	ENSMAUG00000016478	Elavl3	99	84.573	Mesocricetus_auratus
ENSSMAG00000004671	elavl3	99	84.022	ENSMICG00000016528	ELAVL3	99	85.124	Microcebus_murinus
ENSSMAG00000004671	elavl3	99	83.471	ENSMOCG00000002046	Elavl3	99	84.573	Microtus_ochrogaster
ENSSMAG00000004671	elavl3	99	99.123	ENSMMOG00000012154	elavl3	99	99.123	Mola_mola
ENSSMAG00000004671	elavl3	99	86.798	ENSMODG00000006653	ELAVL3	92	86.798	Monodelphis_domestica
ENSSMAG00000004671	elavl3	99	95.493	ENSMALG00000016659	elavl3	99	95.493	Monopterus_albus
ENSSMAG00000004671	elavl3	99	85.795	MGP_CAROLIEiJ_G0031894	Elavl3	100	86.932	Mus_caroli
ENSSMAG00000004671	elavl3	99	83.471	ENSMUSG00000003410	Elavl3	99	84.573	Mus_musculus
ENSSMAG00000004671	elavl3	99	85.511	MGP_PahariEiJ_G0014760	Elavl3	100	86.648	Mus_pahari
ENSSMAG00000004671	elavl3	51	81.982	MGP_SPRETEiJ_G0033017	-	51	81.739	Mus_spretus
ENSSMAG00000004671	elavl3	99	83.747	ENSMPUG00000005040	ELAVL3	99	84.848	Mustela_putorius_furo
ENSSMAG00000004671	elavl3	99	85.165	ENSMLUG00000016320	ELAVL3	99	85.165	Myotis_lucifugus
ENSSMAG00000004671	elavl3	99	84.022	ENSNGAG00000000968	Elavl3	99	85.124	Nannospalax_galili
ENSSMAG00000004671	elavl3	99	95.493	ENSNBRG00000010319	elavl3	99	95.493	Neolamprologus_brichardi
ENSSMAG00000004671	elavl3	99	87.328	ENSMEUG00000016706	ELAVL3	99	87.328	Notamacropus_eugenii
ENSSMAG00000004671	elavl3	85	88.936	ENSOPRG00000007373	ELAVL3	95	88.936	Ochotona_princeps
ENSSMAG00000004671	elavl3	99	84.022	ENSODEG00000015790	ELAVL3	99	85.124	Octodon_degus
ENSSMAG00000004671	elavl3	99	95.493	ENSONIG00000001538	elavl3	98	95.493	Oreochromis_niloticus
ENSSMAG00000004671	elavl3	89	85.240	ENSOANG00000015046	ELAVL3	98	86.905	Ornithorhynchus_anatinus
ENSSMAG00000004671	elavl3	99	95.493	ENSORLG00000005379	elavl3	99	95.493	Oryzias_latipes
ENSSMAG00000004671	elavl3	99	99.123	ENSORLG00020004570	elavl3	99	99.123	Oryzias_latipes_hni
ENSSMAG00000004671	elavl3	100	95.251	ENSORLG00015000662	elavl3	100	95.251	Oryzias_latipes_hsok
ENSSMAG00000004671	elavl3	99	99.123	ENSOMEG00000023959	elavl3	99	99.123	Oryzias_melastigma
ENSSMAG00000004671	elavl3	99	84.022	ENSOGAG00000007072	ELAVL3	99	85.124	Otolemur_garnettii
ENSSMAG00000004671	elavl3	99	84.298	ENSOARG00000018464	ELAVL3	99	85.399	Ovis_aries
ENSSMAG00000004671	elavl3	99	84.022	ENSPPAG00000033972	ELAVL3	99	85.124	Pan_paniscus
ENSSMAG00000004671	elavl3	99	84.022	ENSPPRG00000005151	ELAVL3	99	85.124	Panthera_pardus
ENSSMAG00000004671	elavl3	97	84.273	ENSPTIG00000013610	ELAVL3	97	85.460	Panthera_tigris_altaica
ENSSMAG00000004671	elavl3	99	84.022	ENSPTRG00000010506	ELAVL3	99	85.124	Pan_troglodytes
ENSSMAG00000004671	elavl3	99	85.434	ENSPANG00000005849	ELAVL3	99	86.555	Papio_anubis
ENSSMAG00000004671	elavl3	99	98.246	ENSPKIG00000016207	elavl3	99	98.246	Paramormyrops_kingsleyae
ENSSMAG00000004671	elavl3	99	99.123	ENSPMGG00000002016	elavl3	99	99.123	Periophthalmus_magnuspinnatus
ENSSMAG00000004671	elavl3	98	97.082	ENSPFOG00000007754	elavl3	100	97.082	Poecilia_formosa
ENSSMAG00000004671	elavl3	100	99.125	ENSPLAG00000001547	elavl3	100	99.125	Poecilia_latipinna
ENSSMAG00000004671	elavl3	99	99.705	ENSPMEG00000010156	elavl3	99	99.705	Poecilia_mexicana
ENSSMAG00000004671	elavl3	100	98.698	ENSPREG00000006971	elavl3	100	98.698	Poecilia_reticulata
ENSSMAG00000004671	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSSMAG00000004671	elavl3	83	88.182	ENSPCAG00000015952	ELAVL3	65	86.822	Procavia_capensis
ENSSMAG00000004671	elavl3	99	84.022	ENSPCOG00000023781	ELAVL3	99	85.124	Propithecus_coquereli
ENSSMAG00000004671	elavl3	99	84.022	ENSPVAG00000014893	ELAVL3	99	85.124	Pteropus_vampyrus
ENSSMAG00000004671	elavl3	99	99.123	ENSPNYG00000013186	elavl3	97	99.123	Pundamilia_nyererei
ENSSMAG00000004671	elavl3	99	99.123	ENSPNAG00000003633	elavl3	99	99.123	Pygocentrus_nattereri
ENSSMAG00000004671	elavl3	99	83.471	ENSRNOG00000013752	Elavl3	99	84.573	Rattus_norvegicus
ENSSMAG00000004671	elavl3	99	86.119	ENSRBIG00000034762	ELAVL3	99	87.252	Rhinopithecus_bieti
ENSSMAG00000004671	elavl3	90	86.000	ENSRROG00000034305	ELAVL3	95	90.909	Rhinopithecus_roxellana
ENSSMAG00000004671	elavl3	99	84.022	ENSSBOG00000030047	ELAVL3	100	89.103	Saimiri_boliviensis_boliviensis
ENSSMAG00000004671	elavl3	96	93.043	ENSSHAG00000005583	ELAVL3	100	93.043	Sarcophilus_harrisii
ENSSMAG00000004671	elavl3	99	94.675	ENSSFOG00015023630	elavl3	99	98.137	Scleropages_formosus
ENSSMAG00000004671	elavl3	99	99.123	ENSSDUG00000020708	elavl3	99	99.123	Seriola_dumerili
ENSSMAG00000004671	elavl3	100	99.219	ENSSLDG00000013769	elavl3	100	99.219	Seriola_lalandi_dorsalis
ENSSMAG00000004671	elavl3	99	74.176	ENSSARG00000005949	ELAVL3	99	75.275	Sorex_araneus
ENSSMAG00000004671	elavl3	99	99.123	ENSSPAG00000000990	elavl3	99	99.123	Stegastes_partitus
ENSSMAG00000004671	elavl3	99	84.022	ENSSSCG00000013617	ELAVL3	99	85.124	Sus_scrofa
ENSSMAG00000004671	elavl3	99	99.705	ENSTRUG00000010719	elavl3	99	99.705	Takifugu_rubripes
ENSSMAG00000004671	elavl3	99	94.693	ENSTNIG00000018572	elavl3	99	94.693	Tetraodon_nigroviridis
ENSSMAG00000004671	elavl3	97	81.288	ENSTBEG00000006133	ELAVL3	99	82.515	Tupaia_belangeri
ENSSMAG00000004671	elavl3	99	83.747	ENSTTRG00000001789	ELAVL3	99	84.848	Tursiops_truncatus
ENSSMAG00000004671	elavl3	97	89.851	ENSUAMG00000000405	ELAVL3	96	91.045	Ursus_americanus
ENSSMAG00000004671	elavl3	97	82.550	ENSUMAG00000019546	ELAVL3	87	83.893	Ursus_maritimus
ENSSMAG00000004671	elavl3	99	85.674	ENSVVUG00000023733	ELAVL3	99	86.798	Vulpes_vulpes
ENSSMAG00000004671	elavl3	99	91.570	ENSXETG00000016741	elavl3	99	91.570	Xenopus_tropicalis
ENSSMAG00000004671	elavl3	99	99.123	ENSXMAG00000018287	elavl3	99	99.123	Xiphophorus_maculatus