EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000004801 (Gene tree)
Gene ID: -
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 11583 bases
Position: chr8:7681680-7693262
Accession: ZDB-GENE-021125-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000007810	ResIII	PF04851.15	6.4e-11	1	1
ENSSMAP00000007810	DEAD	PF00270.29	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007909	-	6522	-	ENSSMAP00000007810	1034 (aa)	-	A0A2U9BMX4

Gene Model

Click here to download ENSSMAG00000004801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000004801	smarca5	52	41.058	ENSSMAG00000019377	chd1l	60	41.058
ENSSMAG00000004801	smarca5	50	40.268	ENSSMAG00000017423	hells	81	36.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004801	smarca5	95	82.371	ENSG00000102038	SMARCA1	93	82.371	Homo_sapiens
ENSSMAG00000004801	smarca5	100	96.724	ENSAPOG00000016035	smarca5	100	96.724	Acanthochromis_polyacanthus
ENSSMAG00000004801	smarca5	95	81.582	ENSAMEG00000015218	SMARCA1	93	81.582	Ailuropoda_melanoleuca
ENSSMAG00000004801	smarca5	87	96.892	ENSACIG00000016982	smarca5	100	96.892	Amphilophus_citrinellus
ENSSMAG00000004801	smarca5	100	96.724	ENSAOCG00000015578	smarca5	100	96.724	Amphiprion_ocellaris
ENSSMAG00000004801	smarca5	100	96.724	ENSAPEG00000011117	smarca5	99	97.991	Amphiprion_percula
ENSSMAG00000004801	smarca5	100	96.432	ENSATEG00000012894	smarca5	100	96.432	Anabas_testudineus
ENSSMAG00000004801	smarca5	95	83.605	ENSAPLG00000013149	SMARCA1	99	83.605	Anas_platyrhynchos
ENSSMAG00000004801	smarca5	97	81.863	ENSACAG00000011376	SMARCA1	97	82.087	Anolis_carolinensis
ENSSMAG00000004801	smarca5	95	77.710	ENSANAG00000023098	SMARCA1	93	77.710	Aotus_nancymaae
ENSSMAG00000004801	smarca5	100	96.050	ENSACLG00000025356	smarca5	100	96.050	Astatotilapia_calliptera
ENSSMAG00000004801	smarca5	100	91.083	ENSAMXG00000005709	smarca5	97	92.963	Astyanax_mexicanus
ENSSMAG00000004801	smarca5	90	83.996	ENSAMXG00000011227	smarca1	99	85.163	Astyanax_mexicanus
ENSSMAG00000004801	smarca5	95	82.467	ENSBTAG00000002292	SMARCA1	91	82.396	Bos_taurus
ENSSMAG00000004801	smarca5	95	63.591	WBGene00002169	isw-1	97	62.903	Caenorhabditis_elegans
ENSSMAG00000004801	smarca5	95	82.371	ENSCJAG00000002868	SMARCA1	93	82.371	Callithrix_jacchus
ENSSMAG00000004801	smarca5	95	73.307	ENSCAFG00000018673	SMARCA1	99	74.824	Canis_familiaris
ENSSMAG00000004801	smarca5	95	82.573	ENSCAFG00020001751	SMARCA1	93	82.573	Canis_lupus_dingo
ENSSMAG00000004801	smarca5	95	82.168	ENSCHIG00000009837	SMARCA1	93	82.168	Capra_hircus
ENSSMAG00000004801	smarca5	95	82.472	ENSTSYG00000004240	SMARCA1	95	83.298	Carlito_syrichta
ENSSMAG00000004801	smarca5	95	81.672	ENSCPOG00000013601	SMARCA1	94	81.672	Cavia_porcellus
ENSSMAG00000004801	smarca5	95	79.737	ENSCCAG00000030817	SMARCA1	93	79.737	Cebus_capucinus
ENSSMAG00000004801	smarca5	93	83.489	ENSCATG00000015921	SMARCA1	91	83.544	Cercocebus_atys
ENSSMAG00000004801	smarca5	95	81.966	ENSCLAG00000002171	SMARCA1	93	81.966	Chinchilla_lanigera
ENSSMAG00000004801	smarca5	95	82.371	ENSCSAG00000008460	SMARCA1	93	82.371	Chlorocebus_sabaeus
ENSSMAG00000004801	smarca5	95	83.384	ENSCPBG00000001146	SMARCA1	93	83.384	Chrysemys_picta_bellii
ENSSMAG00000004801	smarca5	96	73.658	ENSCING00000004110	swi/snf	99	73.658	Ciona_intestinalis
ENSSMAG00000004801	smarca5	96	73.538	ENSCSAVG00000004620	-	99	75.951	Ciona_savignyi
ENSSMAG00000004801	smarca5	95	82.472	ENSCANG00000007183	SMARCA1	93	82.472	Colobus_angolensis_palliatus
ENSSMAG00000004801	smarca5	95	81.947	ENSCGRG00001010776	Smarca1	93	81.947	Cricetulus_griseus_chok1gshd
ENSSMAG00000004801	smarca5	93	82.420	ENSCGRG00000015301	Smarca1	95	82.458	Cricetulus_griseus_crigri
ENSSMAG00000004801	smarca5	100	96.525	ENSCSEG00000000328	smarca5	100	96.525	Cynoglossus_semilaevis
ENSSMAG00000004801	smarca5	100	95.950	ENSCVAG00000008668	smarca5	99	96.812	Cyprinodon_variegatus
ENSSMAG00000004801	smarca5	96	81.540	ENSDARG00000012776	smarca1	97	81.540	Danio_rerio
ENSSMAG00000004801	smarca5	100	90.288	ENSDARG00000052348	smarca5	100	90.270	Danio_rerio
ENSSMAG00000004801	smarca5	93	83.281	ENSDNOG00000004315	SMARCA1	91	83.333	Dasypus_novemcinctus
ENSSMAG00000004801	smarca5	97	81.033	ENSDORG00000009270	Smarca1	91	83.966	Dipodomys_ordii
ENSSMAG00000004801	smarca5	95	74.444	FBgn0011604	Iswi	99	72.217	Drosophila_melanogaster
ENSSMAG00000004801	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSSMAG00000004801	smarca5	97	80.636	ENSEBUG00000001239	smarca5	99	80.636	Eptatretus_burgeri
ENSSMAG00000004801	smarca5	95	78.340	ENSEASG00005008218	SMARCA1	99	78.947	Equus_asinus_asinus
ENSSMAG00000004801	smarca5	95	82.472	ENSECAG00000012106	SMARCA1	93	82.472	Equus_caballus
ENSSMAG00000004801	smarca5	77	83.444	ENSEEUG00000014927	SMARCA1	80	83.444	Erinaceus_europaeus
ENSSMAG00000004801	smarca5	94	83.811	ENSELUG00000010515	smarca1	95	84.824	Esox_lucius
ENSSMAG00000004801	smarca5	95	82.472	ENSFCAG00000018496	SMARCA1	93	82.472	Felis_catus
ENSSMAG00000004801	smarca5	88	84.683	ENSFALG00000000209	SMARCA1	98	84.683	Ficedula_albicollis
ENSSMAG00000004801	smarca5	93	82.154	ENSFDAG00000009818	SMARCA1	94	82.188	Fukomys_damarensis
ENSSMAG00000004801	smarca5	100	94.359	ENSFHEG00000007687	smarca5	100	94.264	Fundulus_heteroclitus
ENSSMAG00000004801	smarca5	97	82.036	ENSGALG00000008431	SMARCA1	96	84.058	Gallus_gallus
ENSSMAG00000004801	smarca5	100	95.950	ENSGAFG00000017731	smarca5	100	95.950	Gambusia_affinis
ENSSMAG00000004801	smarca5	94	83.951	ENSGAGG00000023575	SMARCA1	99	83.951	Gopherus_agassizii
ENSSMAG00000004801	smarca5	70	96.000	ENSGGOG00000012841	-	93	78.116	Gorilla_gorilla
ENSSMAG00000004801	smarca5	95	81.763	ENSHGLG00000003080	SMARCA1	93	81.763	Heterocephalus_glaber_female
ENSSMAG00000004801	smarca5	95	81.269	ENSHGLG00100001102	SMARCA1	99	81.269	Heterocephalus_glaber_male
ENSSMAG00000004801	smarca5	100	96.243	ENSHCOG00000005458	smarca5	100	96.243	Hippocampus_comes
ENSSMAG00000004801	smarca5	96	82.880	ENSIPUG00000016905	Smarca1	99	83.811	Ictalurus_punctatus
ENSSMAG00000004801	smarca5	100	90.865	ENSIPUG00000005229	SMARCA5	99	92.914	Ictalurus_punctatus
ENSSMAG00000004801	smarca5	95	82.371	ENSSTOG00000014524	SMARCA1	97	80.938	Ictidomys_tridecemlineatus
ENSSMAG00000004801	smarca5	95	81.250	ENSJJAG00000002593	Smarca1	93	81.250	Jaculus_jaculus
ENSSMAG00000004801	smarca5	100	95.564	ENSKMAG00000003777	smarca5	100	95.661	Kryptolebias_marmoratus
ENSSMAG00000004801	smarca5	100	96.718	ENSLBEG00000018112	smarca5	100	96.718	Labrus_bergylta
ENSSMAG00000004801	smarca5	94	96.626	ENSLBEG00000013295	SMARCA1	100	98.481	Labrus_bergylta
ENSSMAG00000004801	smarca5	94	85.155	ENSLACG00000016697	SMARCA1	95	85.155	Latimeria_chalumnae
ENSSMAG00000004801	smarca5	95	85.306	ENSLOCG00000014591	smarca1	95	85.306	Lepisosteus_oculatus
ENSSMAG00000004801	smarca5	95	81.370	ENSLAFG00000000896	SMARCA1	99	81.370	Loxodonta_africana
ENSSMAG00000004801	smarca5	95	82.371	ENSMFAG00000002117	SMARCA1	94	83.368	Macaca_fascicularis
ENSSMAG00000004801	smarca5	93	83.489	ENSMMUG00000008818	SMARCA1	97	83.919	Macaca_mulatta
ENSSMAG00000004801	smarca5	93	83.489	ENSMNEG00000041768	SMARCA1	94	83.368	Macaca_nemestrina
ENSSMAG00000004801	smarca5	95	82.371	ENSMLEG00000043198	SMARCA1	93	82.371	Mandrillus_leucophaeus
ENSSMAG00000004801	smarca5	100	95.965	ENSMAMG00000014294	smarca5	100	95.965	Mastacembelus_armatus
ENSSMAG00000004801	smarca5	100	96.050	ENSMZEG00005009369	smarca5	100	96.050	Maylandia_zebra
ENSSMAG00000004801	smarca5	95	82.082	ENSMGAG00000007042	SMARCA1	98	82.082	Meleagris_gallopavo
ENSSMAG00000004801	smarca5	93	82.231	ENSMAUG00000008133	Smarca1	91	82.267	Mesocricetus_auratus
ENSSMAG00000004801	smarca5	95	82.776	ENSMICG00000015768	SMARCA1	93	82.776	Microcebus_murinus
ENSSMAG00000004801	smarca5	95	81.351	ENSMOCG00000009464	Smarca1	93	81.351	Microtus_ochrogaster
ENSSMAG00000004801	smarca5	96	95.464	ENSMMOG00000005547	smarca5	99	95.464	Mola_mola
ENSSMAG00000004801	smarca5	99	79.730	ENSMODG00000013187	-	94	83.897	Monodelphis_domestica
ENSSMAG00000004801	smarca5	100	96.054	ENSMALG00000002081	smarca5	100	96.054	Monopterus_albus
ENSSMAG00000004801	smarca5	95	81.250	MGP_CAROLIEiJ_G0033034	Smarca1	93	81.250	Mus_caroli
ENSSMAG00000004801	smarca5	95	81.351	ENSMUSG00000031099	Smarca1	93	81.351	Mus_musculus
ENSSMAG00000004801	smarca5	95	81.523	MGP_PahariEiJ_G0031579	Smarca1	93	81.523	Mus_pahari
ENSSMAG00000004801	smarca5	95	81.351	MGP_SPRETEiJ_G0034192	Smarca1	93	81.351	Mus_spretus
ENSSMAG00000004801	smarca5	95	81.582	ENSMPUG00000017423	SMARCA1	88	81.582	Mustela_putorius_furo
ENSSMAG00000004801	smarca5	95	80.400	ENSMLUG00000029614	SMARCA1	93	80.100	Myotis_lucifugus
ENSSMAG00000004801	smarca5	93	82.748	ENSNGAG00000006492	Smarca1	91	82.791	Nannospalax_galili
ENSSMAG00000004801	smarca5	96	96.881	ENSNBRG00000004463	smarca5	99	96.881	Neolamprologus_brichardi
ENSSMAG00000004801	smarca5	95	80.681	ENSNLEG00000015179	SMARCA1	95	82.650	Nomascus_leucogenys
ENSSMAG00000004801	smarca5	89	75.888	ENSMEUG00000008819	SMARCA1	97	75.888	Notamacropus_eugenii
ENSSMAG00000004801	smarca5	97	79.510	ENSODEG00000012163	SMARCA1	91	82.188	Octodon_degus
ENSSMAG00000004801	smarca5	100	96.146	ENSONIG00000009993	smarca5	100	96.146	Oreochromis_niloticus
ENSSMAG00000004801	smarca5	94	84.259	ENSOANG00000002862	SMARCA1	99	84.259	Ornithorhynchus_anatinus
ENSSMAG00000004801	smarca5	95	82.472	ENSOCUG00000001047	SMARCA1	93	82.472	Oryctolagus_cuniculus
ENSSMAG00000004801	smarca5	100	95.380	ENSORLG00000021998	smarca5	100	95.573	Oryzias_latipes
ENSSMAG00000004801	smarca5	100	95.568	ENSORLG00020017679	smarca5	100	95.665	Oryzias_latipes_hni
ENSSMAG00000004801	smarca5	100	96.146	ENSORLG00015017210	smarca5	100	96.146	Oryzias_latipes_hsok
ENSSMAG00000004801	smarca5	100	95.757	ENSOMEG00000000086	smarca5	100	96.046	Oryzias_melastigma
ENSSMAG00000004801	smarca5	93	82.752	ENSOGAG00000004399	SMARCA1	91	82.812	Otolemur_garnettii
ENSSMAG00000004801	smarca5	94	82.618	ENSOARG00000014638	SMARCA1	99	82.618	Ovis_aries
ENSSMAG00000004801	smarca5	95	82.371	ENSPPAG00000034647	SMARCA1	93	82.371	Pan_paniscus
ENSSMAG00000004801	smarca5	95	82.573	ENSPPRG00000008929	SMARCA1	93	82.573	Panthera_pardus
ENSSMAG00000004801	smarca5	95	80.777	ENSPTIG00000000915	SMARCA1	97	80.777	Panthera_tigris_altaica
ENSSMAG00000004801	smarca5	95	82.371	ENSPTRG00000049876	SMARCA1	91	83.544	Pan_troglodytes
ENSSMAG00000004801	smarca5	95	82.371	ENSPANG00000003871	SMARCA1	93	82.371	Papio_anubis
ENSSMAG00000004801	smarca5	94	81.531	ENSPKIG00000013411	smarca1	99	81.531	Paramormyrops_kingsleyae
ENSSMAG00000004801	smarca5	94	83.951	ENSPSIG00000010101	SMARCA1	99	83.951	Pelodiscus_sinensis
ENSSMAG00000004801	smarca5	93	82.541	ENSPEMG00000017503	Smarca1	91	82.581	Peromyscus_maniculatus_bairdii
ENSSMAG00000004801	smarca5	94	84.221	ENSPCIG00000015460	SMARCA1	96	84.221	Phascolarctos_cinereus
ENSSMAG00000004801	smarca5	100	95.853	ENSPFOG00000007649	smarca5	100	95.853	Poecilia_formosa
ENSSMAG00000004801	smarca5	100	95.853	ENSPLAG00000003363	smarca5	100	95.853	Poecilia_latipinna
ENSSMAG00000004801	smarca5	100	95.950	ENSPMEG00000019849	smarca5	100	95.950	Poecilia_mexicana
ENSSMAG00000004801	smarca5	100	95.468	ENSPREG00000023250	smarca5	100	95.661	Poecilia_reticulata
ENSSMAG00000004801	smarca5	95	79.534	ENSPPYG00000020703	SMARCA1	93	79.534	Pongo_abelii
ENSSMAG00000004801	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	79.525	Propithecus_coquereli
ENSSMAG00000004801	smarca5	87	82.687	ENSPVAG00000003805	SMARCA1	85	82.763	Pteropus_vampyrus
ENSSMAG00000004801	smarca5	58	97.098	ENSPNYG00000012299	smarca5	92	97.098	Pundamilia_nyererei
ENSSMAG00000004801	smarca5	95	81.560	ENSRNOG00000003762	Smarca1	93	81.560	Rattus_norvegicus
ENSSMAG00000004801	smarca5	95	82.472	ENSRROG00000034167	SMARCA1	93	82.472	Rhinopithecus_roxellana
ENSSMAG00000004801	smarca5	94	82.822	ENSSBOG00000020641	SMARCA1	99	82.822	Saimiri_boliviensis_boliviensis
ENSSMAG00000004801	smarca5	94	79.321	ENSSHAG00000013518	SMARCA1	99	79.321	Sarcophilus_harrisii
ENSSMAG00000004801	smarca5	95	83.638	ENSSFOG00015009043	smarca1	96	83.638	Scleropages_formosus
ENSSMAG00000004801	smarca5	95	92.464	ENSSFOG00015016794	smarca5	100	92.887	Scleropages_formosus
ENSSMAG00000004801	smarca5	100	97.195	ENSSDUG00000020690	smarca5	100	97.195	Seriola_dumerili
ENSSMAG00000004801	smarca5	100	97.195	ENSSLDG00000025190	smarca5	100	97.195	Seriola_lalandi_dorsalis
ENSSMAG00000004801	smarca5	79	83.630	ENSSARG00000000842	SMARCA1	81	83.630	Sorex_araneus
ENSSMAG00000004801	smarca5	93	84.161	ENSSPUG00000000590	SMARCA1	96	82.146	Sphenodon_punctatus
ENSSMAG00000004801	smarca5	100	96.532	ENSSPAG00000002894	smarca5	100	96.532	Stegastes_partitus
ENSSMAG00000004801	smarca5	94	82.680	ENSSSCG00000012649	SMARCA1	97	80.881	Sus_scrofa
ENSSMAG00000004801	smarca5	95	83.299	ENSTGUG00000003899	-	99	83.299	Taeniopygia_guttata
ENSSMAG00000004801	smarca5	100	94.889	ENSTRUG00000014094	smarca5	100	94.696	Takifugu_rubripes
ENSSMAG00000004801	smarca5	97	94.362	ENSTNIG00000017717	smarca5	97	94.653	Tetraodon_nigroviridis
ENSSMAG00000004801	smarca5	86	81.929	ENSTBEG00000014973	SMARCA1	89	81.962	Tupaia_belangeri
ENSSMAG00000004801	smarca5	93	79.201	ENSTTRG00000006168	SMARCA1	97	79.084	Tursiops_truncatus
ENSSMAG00000004801	smarca5	95	82.454	ENSUAMG00000020201	SMARCA1	93	82.454	Ursus_americanus
ENSSMAG00000004801	smarca5	97	77.106	ENSUMAG00000004073	SMARCA1	99	83.055	Ursus_maritimus
ENSSMAG00000004801	smarca5	73	87.375	ENSVPAG00000010492	-	77	87.762	Vicugna_pacos
ENSSMAG00000004801	smarca5	95	82.573	ENSVVUG00000008878	SMARCA1	98	84.239	Vulpes_vulpes
ENSSMAG00000004801	smarca5	95	83.215	ENSXETG00000001526	smarca1	98	83.215	Xenopus_tropicalis
ENSSMAG00000004801	smarca5	97	96.429	ENSXCOG00000011170	smarca5	100	96.429	Xiphophorus_couchianus
ENSSMAG00000004801	smarca5	100	95.950	ENSXMAG00000009678	smarca5	100	95.950	Xiphophorus_maculatus