EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000004874 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-296i8.2
Alias: -
Full Name: si:ch1073-296i8.2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2144 bases
Position: chr10:5466697-5468840
Accession: ZDB-GENE-110411-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000007867	RNase_T	PF00929.24	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000007966	-	780	-	ENSSMAP00000007867	259 (aa)	-	A0A2U9BX95

Gene Model

Click here to download ENSSMAG00000004874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004874's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004874	si:ch1073-296i8.2	82	63.600	ENSAOCG00000011593	si:ch1073-296i8.2	84	63.598	Amphiprion_ocellaris
ENSSMAG00000004874	si:ch1073-296i8.2	80	64.490	ENSAPEG00000012492	si:ch1073-296i8.2	84	64.530	Amphiprion_percula
ENSSMAG00000004874	si:ch1073-296i8.2	95	83.806	ENSATEG00000021547	si:ch1073-296i8.2	96	83.806	Anabas_testudineus
ENSSMAG00000004874	si:ch1073-296i8.2	68	44.633	ENSATEG00000021542	si:ch1073-385f13.3	90	44.633	Anabas_testudineus
ENSSMAG00000004874	si:ch1073-296i8.2	68	40.909	ENSACLG00000023991	-	53	40.909	Astatotilapia_calliptera
ENSSMAG00000004874	si:ch1073-296i8.2	73	42.105	ENSCVAG00000001533	-	96	42.105	Cyprinodon_variegatus
ENSSMAG00000004874	si:ch1073-296i8.2	79	48.309	ENSDARG00000092584	si:ch1073-385f13.3	84	48.309	Danio_rerio
ENSSMAG00000004874	si:ch1073-296i8.2	88	57.205	ENSDARG00000093773	si:ch1073-296i8.2	95	56.769	Danio_rerio
ENSSMAG00000004874	si:ch1073-296i8.2	93	71.193	ENSFHEG00000018188	si:ch1073-296i8.2	96	68.952	Fundulus_heteroclitus
ENSSMAG00000004874	si:ch1073-296i8.2	73	41.361	ENSFHEG00000018181	-	95	41.361	Fundulus_heteroclitus
ENSSMAG00000004874	si:ch1073-296i8.2	68	71.429	ENSGMOG00000019335	si:ch1073-296i8.2	99	71.429	Gadus_morhua
ENSSMAG00000004874	si:ch1073-296i8.2	68	46.927	ENSGMOG00000019565	-	94	46.927	Gadus_morhua
ENSSMAG00000004874	si:ch1073-296i8.2	69	77.654	ENSGACG00000007185	si:ch1073-296i8.2	99	77.654	Gasterosteus_aculeatus
ENSSMAG00000004874	si:ch1073-296i8.2	68	44.068	ENSHBUG00000007541	si:ch1073-385f13.3	89	44.068	Haplochromis_burtoni
ENSSMAG00000004874	si:ch1073-296i8.2	78	67.327	ENSHCOG00000008574	si:ch1073-296i8.2	85	67.327	Hippocampus_comes
ENSSMAG00000004874	si:ch1073-296i8.2	87	70.796	ENSKMAG00000015660	si:ch1073-296i8.2	100	69.027	Kryptolebias_marmoratus
ENSSMAG00000004874	si:ch1073-296i8.2	67	46.023	ENSKMAG00000015669	-	88	46.023	Kryptolebias_marmoratus
ENSSMAG00000004874	si:ch1073-296i8.2	83	73.488	ENSLBEG00000019623	si:ch1073-296i8.2	84	73.488	Labrus_bergylta
ENSSMAG00000004874	si:ch1073-296i8.2	76	46.701	ENSLOCG00000014933	-	99	46.701	Lepisosteus_oculatus
ENSSMAG00000004874	si:ch1073-296i8.2	68	45.506	ENSMAMG00000023075	si:ch1073-385f13.3	91	45.506	Mastacembelus_armatus
ENSSMAG00000004874	si:ch1073-296i8.2	63	73.006	ENSMMOG00000018979	si:ch1073-296i8.2	69	77.551	Mola_mola
ENSSMAG00000004874	si:ch1073-296i8.2	71	43.850	ENSMALG00000015952	si:ch1073-385f13.3	95	43.850	Monopterus_albus
ENSSMAG00000004874	si:ch1073-296i8.2	68	43.503	ENSONIG00000012794	si:ch1073-385f13.3	89	43.503	Oreochromis_niloticus
ENSSMAG00000004874	si:ch1073-296i8.2	71	43.548	ENSORLG00000030645	si:ch1073-385f13.3	83	43.548	Oryzias_latipes
ENSSMAG00000004874	si:ch1073-296i8.2	83	66.667	ENSORLG00000023958	si:ch1073-296i8.2	92	68.473	Oryzias_latipes
ENSSMAG00000004874	si:ch1073-296i8.2	80	68.750	ENSORLG00020021912	si:ch1073-296i8.2	92	68.966	Oryzias_latipes_hni
ENSSMAG00000004874	si:ch1073-296i8.2	71	42.703	ENSORLG00020021903	-	93	42.703	Oryzias_latipes_hni
ENSSMAG00000004874	si:ch1073-296i8.2	82	66.981	ENSORLG00015015303	si:ch1073-296i8.2	92	68.473	Oryzias_latipes_hsok
ENSSMAG00000004874	si:ch1073-296i8.2	73	40.838	ENSPKIG00000023552	-	89	40.838	Paramormyrops_kingsleyae
ENSSMAG00000004874	si:ch1073-296i8.2	67	43.750	ENSPFOG00000021742	-	92	44.318	Poecilia_formosa
ENSSMAG00000004874	si:ch1073-296i8.2	72	39.683	ENSPFOG00000005521	si:ch1073-385f13.3	95	39.683	Poecilia_formosa
ENSSMAG00000004874	si:ch1073-296i8.2	67	44.318	ENSPMEG00000013087	si:ch1073-385f13.3	91	44.318	Poecilia_mexicana
ENSSMAG00000004874	si:ch1073-296i8.2	72	39.683	ENSPMEG00000013096	si:ch1073-385f13.3	95	39.683	Poecilia_mexicana
ENSSMAG00000004874	si:ch1073-296i8.2	67	37.438	ENSPREG00000013537	-	76	37.438	Poecilia_reticulata
ENSSMAG00000004874	si:ch1073-296i8.2	71	49.730	ENSPNAG00000018956	si:ch1073-385f13.3	98	49.730	Pygocentrus_nattereri
ENSSMAG00000004874	si:ch1073-296i8.2	72	44.974	ENSSLDG00000002379	si:ch1073-385f13.3	95	44.974	Seriola_lalandi_dorsalis
ENSSMAG00000004874	si:ch1073-296i8.2	75	73.196	ENSSPAG00000012797	si:ch1073-296i8.2	98	73.822	Stegastes_partitus
ENSSMAG00000004874	si:ch1073-296i8.2	75	73.057	ENSTNIG00000010399	si:ch1073-296i8.2	85	73.057	Tetraodon_nigroviridis
ENSSMAG00000004874	si:ch1073-296i8.2	72	39.683	ENSXMAG00000021869	si:ch1073-385f13.3	95	39.683	Xiphophorus_maculatus