EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000004984 (Gene tree)
Gene ID: -
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 14176 bases
Position: chr5:16428708-16442883
Accession: ZDB-GENE-030131-2621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008072	Urb2	PF10441.9	9.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008191	-	8046	-	ENSSMAP00000008087	1581 (aa)	-	-
ENSSMAT00000008175	-	6423	-	ENSSMAP00000008072	1531 (aa)	-	-
ENSSMAT00000008163	-	1578	-	ENSSMAP00000008060	111 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000004984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004984's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000004984	urb2	95	34.089	ENSG00000135763	URB2	99	61.628	Homo_sapiens
ENSSMAG00000004984	urb2	100	70.686	ENSAPOG00000000608	urb2	100	70.686	Acanthochromis_polyacanthus
ENSSMAG00000004984	urb2	96	34.310	ENSAMEG00000009206	URB2	90	34.444	Ailuropoda_melanoleuca
ENSSMAG00000004984	urb2	100	71.520	ENSAOCG00000019961	urb2	91	71.648	Amphiprion_ocellaris
ENSSMAG00000004984	urb2	100	71.648	ENSAPEG00000005263	urb2	91	71.777	Amphiprion_percula
ENSSMAG00000004984	urb2	100	72.669	ENSATEG00000020930	urb2	91	72.926	Anabas_testudineus
ENSSMAG00000004984	urb2	95	35.892	ENSAPLG00000002998	URB2	91	36.242	Anas_platyrhynchos
ENSSMAG00000004984	urb2	95	36.624	ENSACAG00000001285	URB2	89	36.624	Anolis_carolinensis
ENSSMAG00000004984	urb2	95	34.446	ENSANAG00000033963	URB2	89	34.446	Aotus_nancymaae
ENSSMAG00000004984	urb2	100	65.683	ENSACLG00000009254	urb2	100	65.876	Astatotilapia_calliptera
ENSSMAG00000004984	urb2	95	40.365	ENSAMXG00000003474	urb2	89	40.365	Astyanax_mexicanus
ENSSMAG00000004984	urb2	95	34.312	ENSBTAG00000010180	URB2	89	34.065	Bos_taurus
ENSSMAG00000004984	urb2	90	59.859	ENSCJAG00000010968	URB2	89	59.859	Callithrix_jacchus
ENSSMAG00000004984	urb2	95	33.445	ENSCAFG00000012118	URB2	89	33.578	Canis_familiaris
ENSSMAG00000004984	urb2	95	33.445	ENSCAFG00020027217	URB2	95	33.578	Canis_lupus_dingo
ENSSMAG00000004984	urb2	95	34.089	ENSCHIG00000014513	URB2	89	33.777	Capra_hircus
ENSSMAG00000004984	urb2	96	34.290	ENSTSYG00000006924	URB2	90	34.600	Carlito_syrichta
ENSSMAG00000004984	urb2	54	40.000	ENSCPOG00000020777	-	83	40.000	Cavia_porcellus
ENSSMAG00000004984	urb2	95	34.621	ENSCCAG00000023932	URB2	89	34.621	Cebus_capucinus
ENSSMAG00000004984	urb2	95	34.358	ENSCATG00000043366	URB2	90	34.603	Cercocebus_atys
ENSSMAG00000004984	urb2	95	35.464	ENSCLAG00000006268	URB2	89	35.421	Chinchilla_lanigera
ENSSMAG00000004984	urb2	95	34.045	ENSCSAG00000010599	URB2	90	34.290	Chlorocebus_sabaeus
ENSSMAG00000004984	urb2	60	54.054	ENSCHOG00000010163	URB2	56	54.054	Choloepus_hoffmanni
ENSSMAG00000004984	urb2	95	37.158	ENSCPBG00000006191	URB2	89	37.158	Chrysemys_picta_bellii
ENSSMAG00000004984	urb2	95	34.312	ENSCANG00000023711	URB2	90	34.556	Colobus_angolensis_palliatus
ENSSMAG00000004984	urb2	95	34.490	ENSCGRG00001009591	Urb2	89	34.490	Cricetulus_griseus_chok1gshd
ENSSMAG00000004984	urb2	95	34.490	ENSCGRG00000011259	Urb2	89	34.490	Cricetulus_griseus_crigri
ENSSMAG00000004984	urb2	100	58.014	ENSCSEG00000000299	urb2	91	58.014	Cynoglossus_semilaevis
ENSSMAG00000004984	urb2	100	59.417	ENSCVAG00000011011	urb2	91	59.845	Cyprinodon_variegatus
ENSSMAG00000004984	urb2	95	43.490	ENSDARG00000003217	urb2	69	64.444	Danio_rerio
ENSSMAG00000004984	urb2	96	32.480	ENSDNOG00000043064	URB2	92	33.154	Dasypus_novemcinctus
ENSSMAG00000004984	urb2	95	34.453	ENSDORG00000014975	Urb2	89	34.453	Dipodomys_ordii
ENSSMAG00000004984	urb2	91	37.589	ENSETEG00000002869	URB2	85	37.589	Echinops_telfairi
ENSSMAG00000004984	urb2	95	35.047	ENSEASG00005012060	URB2	89	35.247	Equus_asinus_asinus
ENSSMAG00000004984	urb2	88	61.379	ENSECAG00000012338	URB2	89	61.379	Equus_caballus
ENSSMAG00000004984	urb2	87	56.338	ENSEEUG00000002669	URB2	81	55.944	Erinaceus_europaeus
ENSSMAG00000004984	urb2	100	47.552	ENSELUG00000014647	urb2	96	47.748	Esox_lucius
ENSSMAG00000004984	urb2	95	34.310	ENSFCAG00000007662	URB2	89	34.621	Felis_catus
ENSSMAG00000004984	urb2	95	36.176	ENSFALG00000003385	URB2	89	36.176	Ficedula_albicollis
ENSSMAG00000004984	urb2	95	34.520	ENSFDAG00000021079	URB2	89	34.520	Fukomys_damarensis
ENSSMAG00000004984	urb2	100	59.456	ENSFHEG00000010357	urb2	91	59.780	Fundulus_heteroclitus
ENSSMAG00000004984	urb2	95	54.061	ENSGMOG00000012459	urb2	89	53.993	Gadus_morhua
ENSSMAG00000004984	urb2	94	37.281	ENSGALG00000011101	URB2	88	37.239	Gallus_gallus
ENSSMAG00000004984	urb2	95	67.437	ENSGACG00000016179	urb2	89	67.437	Gasterosteus_aculeatus
ENSSMAG00000004984	urb2	95	37.892	ENSGAGG00000021879	URB2	89	37.892	Gopherus_agassizii
ENSSMAG00000004984	urb2	95	34.269	ENSGGOG00000025643	URB2	90	34.379	Gorilla_gorilla
ENSSMAG00000004984	urb2	100	65.619	ENSHBUG00000018469	urb2	91	65.747	Haplochromis_burtoni
ENSSMAG00000004984	urb2	95	34.826	ENSHGLG00000016561	URB2	91	34.826	Heterocephalus_glaber_female
ENSSMAG00000004984	urb2	95	34.161	ENSHGLG00100001838	URB2	89	34.094	Heterocephalus_glaber_male
ENSSMAG00000004984	urb2	95	42.490	ENSIPUG00000020315	urb2	89	42.490	Ictalurus_punctatus
ENSSMAG00000004984	urb2	95	34.416	ENSSTOG00000025323	URB2	89	34.592	Ictidomys_tridecemlineatus
ENSSMAG00000004984	urb2	95	33.825	ENSJJAG00000011998	Urb2	89	33.825	Jaculus_jaculus
ENSSMAG00000004984	urb2	100	62.540	ENSKMAG00000020129	urb2	91	62.863	Kryptolebias_marmoratus
ENSSMAG00000004984	urb2	95	36.687	ENSLACG00000002038	URB2	89	36.705	Latimeria_chalumnae
ENSSMAG00000004984	urb2	99	42.034	ENSLOCG00000015462	urb2	92	42.163	Lepisosteus_oculatus
ENSSMAG00000004984	urb2	95	34.379	ENSLAFG00000012484	URB2	90	34.379	Loxodonta_africana
ENSSMAG00000004984	urb2	95	34.088	ENSMFAG00000039905	URB2	90	34.331	Macaca_fascicularis
ENSSMAG00000004984	urb2	95	34.154	ENSMMUG00000009509	URB2	90	34.398	Macaca_mulatta
ENSSMAG00000004984	urb2	95	34.088	ENSMNEG00000038762	URB2	88	38.281	Macaca_nemestrina
ENSSMAG00000004984	urb2	95	34.242	ENSMLEG00000043252	URB2	90	34.485	Mandrillus_leucophaeus
ENSSMAG00000004984	urb2	100	68.625	ENSMAMG00000020365	urb2	91	68.625	Mastacembelus_armatus
ENSSMAG00000004984	urb2	100	65.491	ENSMZEG00005011027	urb2	91	65.683	Maylandia_zebra
ENSSMAG00000004984	urb2	95	35.676	ENSMGAG00000012073	URB2	94	35.676	Meleagris_gallopavo
ENSSMAG00000004984	urb2	90	58.451	ENSMAUG00000017980	Urb2	89	58.451	Mesocricetus_auratus
ENSSMAG00000004984	urb2	95	33.938	ENSMICG00000033302	URB2	89	34.251	Microcebus_murinus
ENSSMAG00000004984	urb2	95	34.490	ENSMOCG00000020369	Urb2	89	34.490	Microtus_ochrogaster
ENSSMAG00000004984	urb2	100	74.354	ENSMALG00000006529	urb2	91	74.354	Monopterus_albus
ENSSMAG00000004984	urb2	95	33.623	ENSMUSG00000031976	Urb2	90	33.935	Mus_musculus
ENSSMAG00000004984	urb2	95	35.137	ENSMPUG00000012438	URB2	89	35.070	Mustela_putorius_furo
ENSSMAG00000004984	urb2	95	34.226	ENSNGAG00000016524	Urb2	89	34.494	Nannospalax_galili
ENSSMAG00000004984	urb2	95	34.202	ENSNLEG00000014450	URB2	90	34.446	Nomascus_leucogenys
ENSSMAG00000004984	urb2	90	42.793	ENSMEUG00000016434	URB2	86	42.793	Notamacropus_eugenii
ENSSMAG00000004984	urb2	88	37.092	ENSOPRG00000009906	URB2	81	37.092	Ochotona_princeps
ENSSMAG00000004984	urb2	95	35.738	ENSODEG00000005593	URB2	89	36.016	Octodon_degus
ENSSMAG00000004984	urb2	95	64.578	ENSONIG00000017078	urb2	89	65.123	Oreochromis_niloticus
ENSSMAG00000004984	urb2	94	32.825	ENSOANG00000013732	URB2	89	32.699	Ornithorhynchus_anatinus
ENSSMAG00000004984	urb2	96	34.339	ENSOCUG00000010700	URB2	90	34.450	Oryctolagus_cuniculus
ENSSMAG00000004984	urb2	100	59.845	ENSORLG00000010915	urb2	93	60.039	Oryzias_latipes
ENSSMAG00000004984	urb2	100	59.974	ENSORLG00020003361	urb2	91	60.168	Oryzias_latipes_hni
ENSSMAG00000004984	urb2	100	60.180	ENSORLG00015001534	urb2	91	60.180	Oryzias_latipes_hsok
ENSSMAG00000004984	urb2	100	59.846	ENSOMEG00000010076	urb2	91	60.129	Oryzias_melastigma
ENSSMAG00000004984	urb2	95	33.732	ENSOGAG00000003021	URB2	89	33.908	Otolemur_garnettii
ENSSMAG00000004984	urb2	95	34.001	ENSOARG00000003102	URB2	89	33.798	Ovis_aries
ENSSMAG00000004984	urb2	95	34.202	ENSPPAG00000040629	URB2	90	34.312	Pan_paniscus
ENSSMAG00000004984	urb2	95	34.295	ENSPPRG00000012767	URB2	89	34.608	Panthera_pardus
ENSSMAG00000004984	urb2	95	34.497	ENSPTIG00000012577	URB2	93	34.733	Panthera_tigris_altaica
ENSSMAG00000004984	urb2	95	34.362	ENSPTRG00000002092	URB2	90	34.474	Pan_troglodytes
ENSSMAG00000004984	urb2	90	38.281	ENSPANG00000002245	URB2	88	38.281	Papio_anubis
ENSSMAG00000004984	urb2	95	43.674	ENSPKIG00000005787	urb2	89	43.704	Paramormyrops_kingsleyae
ENSSMAG00000004984	urb2	95	36.091	ENSPSIG00000002690	URB2	89	36.024	Pelodiscus_sinensis
ENSSMAG00000004984	urb2	91	32.687	ENSPEMG00000019551	Urb2	89	32.756	Peromyscus_maniculatus_bairdii
ENSSMAG00000004984	urb2	95	34.765	ENSPCIG00000030071	URB2	89	35.061	Phascolarctos_cinereus
ENSSMAG00000004984	urb2	100	59.442	ENSPFOG00000014330	urb2	91	59.442	Poecilia_formosa
ENSSMAG00000004984	urb2	100	59.117	ENSPLAG00000014654	urb2	91	59.117	Poecilia_latipinna
ENSSMAG00000004984	urb2	100	60.026	ENSPMEG00000012356	urb2	91	60.026	Poecilia_mexicana
ENSSMAG00000004984	urb2	100	59.766	ENSPREG00000010268	urb2	91	59.766	Poecilia_reticulata
ENSSMAG00000004984	urb2	96	33.933	ENSPPYG00000000123	URB2	90	34.177	Pongo_abelii
ENSSMAG00000004984	urb2	96	34.360	ENSPCOG00000023537	URB2	90	34.672	Propithecus_coquereli
ENSSMAG00000004984	urb2	96	31.477	ENSPVAG00000002108	URB2	89	31.678	Pteropus_vampyrus
ENSSMAG00000004984	urb2	100	65.811	ENSPNYG00000016840	urb2	100	66.004	Pundamilia_nyererei
ENSSMAG00000004984	urb2	96	42.742	ENSPNAG00000013684	urb2	89	42.742	Pygocentrus_nattereri
ENSSMAG00000004984	urb2	95	33.912	ENSRNOG00000026853	Urb2	87	34.024	Rattus_norvegicus
ENSSMAG00000004984	urb2	95	34.510	ENSRBIG00000037937	URB2	90	34.597	Rhinopithecus_bieti
ENSSMAG00000004984	urb2	95	34.288	ENSRROG00000039854	URB2	90	34.531	Rhinopithecus_roxellana
ENSSMAG00000004984	urb2	95	34.156	ENSSBOG00000023055	URB2	89	34.156	Saimiri_boliviensis_boliviensis
ENSSMAG00000004984	urb2	95	34.590	ENSSHAG00000014735	URB2	89	34.590	Sarcophilus_harrisii
ENSSMAG00000004984	urb2	95	43.358	ENSSFOG00015015432	urb2	90	43.830	Scleropages_formosus
ENSSMAG00000004984	urb2	100	80.361	ENSSDUG00000000902	urb2	91	80.425	Seriola_dumerili
ENSSMAG00000004984	urb2	95	36.747	ENSSPUG00000018549	URB2	89	36.747	Sphenodon_punctatus
ENSSMAG00000004984	urb2	100	71.576	ENSSPAG00000013632	urb2	91	71.576	Stegastes_partitus
ENSSMAG00000004984	urb2	96	33.981	ENSSSCG00000010186	URB2	100	33.718	Sus_scrofa
ENSSMAG00000004984	urb2	95	35.326	ENSTGUG00000009990	URB2	89	35.326	Taeniopygia_guttata
ENSSMAG00000004984	urb2	100	59.035	ENSTRUG00000008173	urb2	92	59.035	Takifugu_rubripes
ENSSMAG00000004984	urb2	88	65.702	ENSTNIG00000017689	urb2	85	65.702	Tetraodon_nigroviridis
ENSSMAG00000004984	urb2	95	34.091	ENSTTRG00000014864	URB2	89	34.091	Tursiops_truncatus
ENSSMAG00000004984	urb2	96	34.510	ENSUAMG00000015022	URB2	90	34.644	Ursus_americanus
ENSSMAG00000004984	urb2	96	34.751	ENSUMAG00000004728	URB2	90	34.843	Ursus_maritimus
ENSSMAG00000004984	urb2	95	33.333	ENSVVUG00000006747	URB2	92	33.467	Vulpes_vulpes
ENSSMAG00000004984	urb2	95	32.997	ENSXETG00000023331	urb2	89	32.997	Xenopus_tropicalis
ENSSMAG00000004984	urb2	100	59.961	ENSXMAG00000015059	urb2	91	59.961	Xiphophorus_maculatus