EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000004997 (Gene tree)
Gene ID
-
Gene Symbol
rbms3
Alias
zgc:153698
Full Name
RNA binding motif%2C single stranded interacting protein
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
143666 bases
Position
chr1:25032156-25175821
Accession
ZDB-GENE-060929-244
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000008197RRM_1PF00076.221.7e-3212
ENSSMAP00000008197RRM_1PF00076.221.7e-3222
ENSSMAP00000008324RRM_1PF00076.221.7e-3212
ENSSMAP00000008324RRM_1PF00076.221.7e-3222
ENSSMAP00000008290RRM_1PF00076.222e-3212
ENSSMAP00000008290RRM_1PF00076.222e-3222
ENSSMAP00000008369RRM_1PF00076.222.2e-3212
ENSSMAP00000008369RRM_1PF00076.222.2e-3222
ENSSMAP00000008184RRM_1PF00076.222.7e-3212
ENSSMAP00000008184RRM_1PF00076.222.7e-3222
ENSSMAP00000008232RRM_1PF00076.222.7e-3212
ENSSMAP00000008232RRM_1PF00076.222.7e-3222
ENSSMAP00000008377RRM_1PF00076.222.9e-3212
ENSSMAP00000008377RRM_1PF00076.222.9e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000008301-3775-ENSSMAP00000008197368 (aa)--
ENSSMAT00000008481-1733-ENSSMAP00000008377438 (aa)--
ENSSMAT00000008473-1317-ENSSMAP00000008369438 (aa)--
ENSSMAT00000008287-3935-ENSSMAP00000008184426 (aa)--
ENSSMAT00000008335-3815-ENSSMAP00000008232426 (aa)--
ENSSMAT00000008393-3698-ENSSMAP00000008290387 (aa)--
ENSSMAT00000008428-3926-ENSSMAP00000008324368 (aa)--
Gene Model
Click here to download ENSSMAG00000004997's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000004997's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000004997rbms36033.750ENSSMAG00000002478celf3a7433.750
ENSSMAG00000004997rbms37536.250ENSSMAG00000009331celf47736.250
ENSSMAG00000004997rbms39968.022ENSSMAG00000004221rbms2b8767.480
ENSSMAG00000004997rbms39965.860ENSSMAG00000012152RBMS18770.606
ENSSMAG00000004997rbms38661.562ENSSMAG00000012722rbms1a8761.562
ENSSMAG00000004997rbms39133.750ENSSMAG00000015634celf3b7433.750
ENSSMAG00000004997rbms38886.196ENSSMAG00000020065-9381.606
ENSSMAG00000004997rbms39965.217ENSSMAG00000003683rbms2a9565.130
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000004997rbms39981.030ENSG00000144642RBMS310080.297Homo_sapiens
ENSSMAG00000004997rbms39983.607ENSAPOG00000003432-9979.577Acanthochromis_polyacanthus
ENSSMAG00000004997rbms310086.500ENSAPOG00000007266rbms310085.652Acanthochromis_polyacanthus
ENSSMAG00000004997rbms37973.616ENSAMEG00000005947RBMS310073.443Ailuropoda_melanoleuca
ENSSMAG00000004997rbms310083.198ENSACIG00000021113RBMS39683.198Amphilophus_citrinellus
ENSSMAG00000004997rbms38086.486ENSACIG00000006987-8385.294Amphilophus_citrinellus
ENSSMAG00000004997rbms39983.607ENSAOCG00000024104-9973.708Amphiprion_ocellaris
ENSSMAG00000004997rbms310094.565ENSAOCG00000021274rbms310093.677Amphiprion_ocellaris
ENSSMAG00000004997rbms38994.479ENSAPEG00000016299rbms38694.495Amphiprion_percula
ENSSMAG00000004997rbms39976.164ENSAPEG00000009481-9973.412Amphiprion_percula
ENSSMAG00000004997rbms39983.607ENSATEG00000008433-9979.577Anabas_testudineus
ENSSMAG00000004997rbms310095.109ENSATEG00000024295rbms310093.208Anabas_testudineus
ENSSMAG00000004997rbms39978.740ENSAPLG00000012270RBMS310075.171Anas_platyrhynchos
ENSSMAG00000004997rbms39981.030ENSACAG00000028664RBMS39976.923Anolis_carolinensis
ENSSMAG00000004997rbms39978.272ENSANAG00000021899RBMS310073.982Aotus_nancymaae
ENSSMAG00000004997rbms39983.333ENSACLG00000008976-9473.274Astatotilapia_calliptera
ENSSMAG00000004997rbms310093.750ENSACLG00000018506rbms310091.803Astatotilapia_calliptera
ENSSMAG00000004997rbms39985.637ENSAMXG00000020388rbms310081.352Astyanax_mexicanus
ENSSMAG00000004997rbms36978.358ENSAMXG00000043770-10078.358Astyanax_mexicanus
ENSSMAG00000004997rbms39981.572ENSBTAG00000044062RBMS310076.690Bos_taurus
ENSSMAG00000004997rbms39978.272ENSCJAG00000004312RBMS310073.982Callithrix_jacchus
ENSSMAG00000004997rbms39977.662ENSCAFG00000005464RBMS39973.589Canis_familiaris
ENSSMAG00000004997rbms39977.662ENSCAFG00020024980RBMS310073.589Canis_lupus_dingo
ENSSMAG00000004997rbms39981.030ENSCHIG00000009144RBMS39976.224Capra_hircus
ENSSMAG00000004997rbms38776.048ENSTSYG00000002615RBMS310075.749Carlito_syrichta
ENSSMAG00000004997rbms39976.839ENSCAPG00000017783RBMS39376.567Cavia_aperea
ENSSMAG00000004997rbms39981.301ENSCPOG00000006457RBMS39976.923Cavia_porcellus
ENSSMAG00000004997rbms39978.272ENSCCAG00000008671RBMS310073.982Cebus_capucinus
ENSSMAG00000004997rbms39978.010ENSCATG00000013222RBMS310073.756Cercocebus_atys
ENSSMAG00000004997rbms39981.301ENSCLAG00000005866RBMS39976.457Chinchilla_lanigera
ENSSMAG00000004997rbms37476.277ENSCSAG00000009655RBMS39975.912Chlorocebus_sabaeus
ENSSMAG00000004997rbms39276.471ENSCHOG00000000758RBMS38176.338Choloepus_hoffmanni
ENSSMAG00000004997rbms39981.301ENSCPBG00000022678RBMS39878.756Chrysemys_picta_bellii
ENSSMAG00000004997rbms39978.272ENSCANG00000032137RBMS310073.982Colobus_angolensis_palliatus
ENSSMAG00000004997rbms39978.049ENSCGRG00001007243Rbms39974.592Cricetulus_griseus_chok1gshd
ENSSMAG00000004997rbms39978.049ENSCGRG00000004599Rbms39974.592Cricetulus_griseus_crigri
ENSSMAG00000004997rbms310092.391ENSCSEG00000010011RBMS310091.101Cynoglossus_semilaevis
ENSSMAG00000004997rbms39983.607ENSCSEG00000014677-9782.308Cynoglossus_semilaevis
ENSSMAG00000004997rbms310092.935ENSCVAG00000022354rbms310090.398Cyprinodon_variegatus
ENSSMAG00000004997rbms39982.787ENSCVAG00000022814-9582.240Cyprinodon_variegatus
ENSSMAG00000004997rbms39985.870ENSDARG00000044574rbms39293.258Danio_rerio
ENSSMAG00000004997rbms39980.435ENSDNOG00000016645RBMS39775.524Dasypus_novemcinctus
ENSSMAG00000004997rbms39980.488ENSDORG00000007220Rbms39975.758Dipodomys_ordii
ENSSMAG00000004997rbms39262.994ENSETEG00000009485-8162.994Echinops_telfairi
ENSSMAG00000004997rbms37055.385ENSEBUG00000005830rbms38355.385Eptatretus_burgeri
ENSSMAG00000004997rbms39980.759ENSEASG00005006152RBMS39977.692Equus_asinus_asinus
ENSSMAG00000004997rbms39980.759ENSECAG00000017871RBMS39977.692Equus_caballus
ENSSMAG00000004997rbms38871.345ENSEEUG00000014337RBMS310067.750Erinaceus_europaeus
ENSSMAG00000004997rbms39984.153ENSELUG00000006905-10082.239Esox_lucius
ENSSMAG00000004997rbms310080.488ENSELUG00000002862rbms310077.778Esox_lucius
ENSSMAG00000004997rbms39980.488ENSFCAG00000002130RBMS39975.758Felis_catus
ENSSMAG00000004997rbms39981.572ENSFALG00000009165RBMS39977.389Ficedula_albicollis
ENSSMAG00000004997rbms39981.301ENSFDAG00000008278RBMS39976.457Fukomys_damarensis
ENSSMAG00000004997rbms310082.927ENSFHEG00000004787RBMS39582.927Fundulus_heteroclitus
ENSSMAG00000004997rbms39978.406ENSGMOG00000002600-9377.892Gadus_morhua
ENSSMAG00000004997rbms39981.572ENSGALG00000011439RBMS39977.389Gallus_gallus
ENSSMAG00000004997rbms39983.060ENSGAFG00000003329-9978.873Gambusia_affinis
ENSSMAG00000004997rbms310092.663ENSGAFG00000000168rbms310090.464Gambusia_affinis
ENSSMAG00000004997rbms37477.091ENSGAGG00000004039RBMS310076.727Gopherus_agassizii
ENSSMAG00000004997rbms39978.272ENSGGOG00000007228RBMS310073.982Gorilla_gorilla
ENSSMAG00000004997rbms39983.333ENSHBUG00000019785-9675.785Haplochromis_burtoni
ENSSMAG00000004997rbms37088.971ENSHBUG00000021196rbms39490.809Haplochromis_burtoni
ENSSMAG00000004997rbms39981.030ENSHGLG00000002170RBMS39976.224Heterocephalus_glaber_female
ENSSMAG00000004997rbms39981.030ENSHGLG00100014278RBMS39976.224Heterocephalus_glaber_male
ENSSMAG00000004997rbms39982.289ENSHCOG00000007894-9977.752Hippocampus_comes
ENSSMAG00000004997rbms310085.946ENSIPUG00000017680rbms310081.818Ictalurus_punctatus
ENSSMAG00000004997rbms39981.030ENSSTOG00000006324RBMS39976.457Ictidomys_tridecemlineatus
ENSSMAG00000004997rbms39980.217ENSJJAG00000014708Rbms39974.126Jaculus_jaculus
ENSSMAG00000004997rbms310093.225ENSKMAG00000020500rbms310091.841Kryptolebias_marmoratus
ENSSMAG00000004997rbms39983.333ENSKMAG00000012586-9979.343Kryptolebias_marmoratus
ENSSMAG00000004997rbms36885.551ENSLBEG00000006677rbms39785.551Labrus_bergylta
ENSSMAG00000004997rbms39983.014ENSLBEG00000027388-9979.529Labrus_bergylta
ENSSMAG00000004997rbms39982.927ENSLACG00000010581RBMS310078.788Latimeria_chalumnae
ENSSMAG00000004997rbms37981.633ENSLOCG00000002328rbms310081.293Lepisosteus_oculatus
ENSSMAG00000004997rbms39977.662ENSLAFG00000000354RBMS310073.589Loxodonta_africana
ENSSMAG00000004997rbms39981.030ENSMFAG00000033300RBMS39976.224Macaca_fascicularis
ENSSMAG00000004997rbms39981.030ENSMMUG00000004404RBMS39976.224Macaca_mulatta
ENSSMAG00000004997rbms39978.272ENSMNEG00000035839RBMS310073.982Macaca_nemestrina
ENSSMAG00000004997rbms39978.010ENSMLEG00000029464RBMS310073.756Mandrillus_leucophaeus
ENSSMAG00000004997rbms310095.109ENSMAMG00000024043rbms310093.443Mastacembelus_armatus
ENSSMAG00000004997rbms39983.880ENSMAMG00000002176-8183.607Mastacembelus_armatus
ENSSMAG00000004997rbms310093.750ENSMZEG00005006308rbms310091.803Maylandia_zebra
ENSSMAG00000004997rbms39983.333ENSMZEG00005026469-9676.818Maylandia_zebra
ENSSMAG00000004997rbms39978.049ENSMAUG00000016436Rbms39974.592Mesocricetus_auratus
ENSSMAG00000004997rbms39978.272ENSMICG00000049249RBMS310073.982Microcebus_murinus
ENSSMAG00000004997rbms39977.507ENSMOCG00000006997Rbms39974.126Microtus_ochrogaster
ENSSMAG00000004997rbms39982.466ENSMMOG00000015071-9978.824Mola_mola
ENSSMAG00000004997rbms38995.399ENSMMOG00000008471RBMS38995.413Mola_mola
ENSSMAG00000004997rbms39975.192ENSMODG00000015125RBMS39971.175Monodelphis_domestica
ENSSMAG00000004997rbms39983.607ENSMALG00000009155-9979.812Monopterus_albus
ENSSMAG00000004997rbms310095.109ENSMALG00000019536RBMS310093.443Monopterus_albus
ENSSMAG00000004997rbms39977.778MGP_CAROLIEiJ_G0032783Rbms310078.680Mus_caroli
ENSSMAG00000004997rbms39978.049ENSMUSG00000039607Rbms39979.630Mus_musculus
ENSSMAG00000004997rbms39977.838MGP_PahariEiJ_G0015650Rbms310078.680Mus_pahari
ENSSMAG00000004997rbms39978.049MGP_SPRETEiJ_G0033930Rbms310078.680Mus_spretus
ENSSMAG00000004997rbms39977.662ENSMPUG00000011956RBMS310073.589Mustela_putorius_furo
ENSSMAG00000004997rbms39981.030ENSMLUG00000000659RBMS310076.224Myotis_lucifugus
ENSSMAG00000004997rbms39980.488ENSNGAG00000014039Rbms39975.758Nannospalax_galili
ENSSMAG00000004997rbms39983.333ENSNBRG00000018065-9979.343Neolamprologus_brichardi
ENSSMAG00000004997rbms39978.272ENSNLEG00000004129RBMS310073.982Nomascus_leucogenys
ENSSMAG00000004997rbms39970.573ENSMEUG00000004772RBMS310068.552Notamacropus_eugenii
ENSSMAG00000004997rbms39977.865ENSOPRG00000006808RBMS38573.756Ochotona_princeps
ENSSMAG00000004997rbms39981.030ENSODEG00000003651RBMS39975.991Octodon_degus
ENSSMAG00000004997rbms310093.750ENSONIG00000007172rbms310086.183Oreochromis_niloticus
ENSSMAG00000004997rbms39979.112ENSOANG00000010529RBMS39974.944Ornithorhynchus_anatinus
ENSSMAG00000004997rbms39977.403ENSOCUG00000004840RBMS39973.138Oryctolagus_cuniculus
ENSSMAG00000004997rbms310091.033ENSORLG00000005370RBMS310088.056Oryzias_latipes
ENSSMAG00000004997rbms39983.607ENSORLG00000002306-9979.577Oryzias_latipes
ENSSMAG00000004997rbms39983.607ENSORLG00020008496-9979.577Oryzias_latipes_hni
ENSSMAG00000004997rbms310090.761ENSORLG00020022674RBMS310087.822Oryzias_latipes_hni
ENSSMAG00000004997rbms310091.304ENSORLG00015005509rbms310088.056Oryzias_latipes_hsok
ENSSMAG00000004997rbms39983.607ENSORLG00015015719-9979.577Oryzias_latipes_hsok
ENSSMAG00000004997rbms39983.333ENSOMEG00000007677-9585.015Oryzias_melastigma
ENSSMAG00000004997rbms310091.033ENSOMEG00000014805RBMS310088.525Oryzias_melastigma
ENSSMAG00000004997rbms39977.143ENSOARG00000014684RBMS39973.138Ovis_aries
ENSSMAG00000004997rbms39978.272ENSPPAG00000036519RBMS310073.982Pan_paniscus
ENSSMAG00000004997rbms39977.749ENSPPRG00000002761RBMS310073.303Panthera_pardus
ENSSMAG00000004997rbms39980.488ENSPTIG00000011568RBMS310075.524Panthera_tigris_altaica
ENSSMAG00000004997rbms39981.030ENSPTRG00000014709RBMS39976.224Pan_troglodytes
ENSSMAG00000004997rbms39978.010ENSPANG00000010234RBMS310073.756Papio_anubis
ENSSMAG00000004997rbms36980.970ENSPKIG00000007989-10080.970Paramormyrops_kingsleyae
ENSSMAG00000004997rbms39981.030ENSPSIG00000005269RBMS39976.923Pelodiscus_sinensis
ENSSMAG00000004997rbms38993.252ENSPMGG00000021544rbms38593.272Periophthalmus_magnuspinnatus
ENSSMAG00000004997rbms39983.880ENSPMGG00000021683-9583.607Periophthalmus_magnuspinnatus
ENSSMAG00000004997rbms39974.932ENSPEMG00000001117Rbms310071.897Peromyscus_maniculatus_bairdii
ENSSMAG00000004997rbms38084.512ENSPCIG00000006106RBMS38881.019Phascolarctos_cinereus
ENSSMAG00000004997rbms310093.207ENSPFOG00000017887rbms310090.867Poecilia_formosa
ENSSMAG00000004997rbms38891.304ENSPLAG00000016866-8391.304Poecilia_latipinna
ENSSMAG00000004997rbms39983.060ENSPMEG00000002993-9978.638Poecilia_mexicana
ENSSMAG00000004997rbms39983.060ENSPREG00000018221-9781.298Poecilia_reticulata
ENSSMAG00000004997rbms39993.151ENSPREG00000011880rbms39986.775Poecilia_reticulata
ENSSMAG00000004997rbms39964.156ENSPPYG00000014050RBMS38261.851Pongo_abelii
ENSSMAG00000004997rbms39957.963ENSPCAG00000006307RBMS39955.982Procavia_capensis
ENSSMAG00000004997rbms39978.534ENSPCOG00000017136RBMS310074.208Propithecus_coquereli
ENSSMAG00000004997rbms39576.503ENSPVAG00000014037RBMS39967.043Pteropus_vampyrus
ENSSMAG00000004997rbms310093.478ENSPNYG00000010546rbms310091.569Pundamilia_nyererei
ENSSMAG00000004997rbms39983.333ENSPNYG00000012624-9979.343Pundamilia_nyererei
ENSSMAG00000004997rbms35080.208ENSPNAG00000026763-6989.809Pygocentrus_nattereri
ENSSMAG00000004997rbms39985.637ENSPNAG00000001800rbms310081.352Pygocentrus_nattereri
ENSSMAG00000004997rbms39977.778ENSRNOG00000025881Rbms310074.592Rattus_norvegicus
ENSSMAG00000004997rbms39978.534ENSRBIG00000035863RBMS310074.208Rhinopithecus_bieti
ENSSMAG00000004997rbms39978.534ENSRROG00000027512RBMS39378.272Rhinopithecus_roxellana
ENSSMAG00000004997rbms39978.272ENSSBOG00000020232RBMS310073.982Saimiri_boliviensis_boliviensis
ENSSMAG00000004997rbms39974.526ENSSHAG00000002411RBMS39476.331Sarcophilus_harrisii
ENSSMAG00000004997rbms39984.066ENSSFOG00015008578rbms39583.791Scleropages_formosus
ENSSMAG00000004997rbms310095.924ENSSDUG00000013656RBMS310094.379Seriola_dumerili
ENSSMAG00000004997rbms39983.607ENSSDUG00000019287-9979.577Seriola_dumerili
ENSSMAG00000004997rbms39983.607ENSSLDG00000013224-9979.577Seriola_lalandi_dorsalis
ENSSMAG00000004997rbms310096.196ENSSLDG00000020276RBMS310093.939Seriola_lalandi_dorsalis
ENSSMAG00000004997rbms38867.544ENSSARG00000000695RBMS37490.206Sorex_araneus
ENSSMAG00000004997rbms38374.038ENSSPUG00000017197RBMS39875.920Sphenodon_punctatus
ENSSMAG00000004997rbms310095.109ENSSPAG00000020693rbms310094.145Stegastes_partitus
ENSSMAG00000004997rbms39983.607ENSSPAG00000003983-9972.584Stegastes_partitus
ENSSMAG00000004997rbms39980.759ENSSSCG00000036381RBMS39975.991Sus_scrofa
ENSSMAG00000004997rbms38776.261ENSTGUG00000003572RBMS310076.119Taeniopygia_guttata
ENSSMAG00000004997rbms39992.643ENSTRUG00000021719RBMS310090.867Takifugu_rubripes
ENSSMAG00000004997rbms39281.525ENSTRUG00000007482-9970.794Takifugu_rubripes
ENSSMAG00000004997rbms38879.532ENSTBEG00000005362RBMS39279.412Tupaia_belangeri
ENSSMAG00000004997rbms39977.083ENSTTRG00000006202RBMS310073.077Tursiops_truncatus
ENSSMAG00000004997rbms39977.662ENSUMAG00000000263RBMS39973.589Ursus_maritimus
ENSSMAG00000004997rbms39968.229ENSVPAG00000003842RBMS39268.063Vicugna_pacos
ENSSMAG00000004997rbms39977.662ENSVVUG00000004660RBMS39189.048Vulpes_vulpes
ENSSMAG00000004997rbms38072.990ENSXETG00000032055RBMS39972.816Xenopus_tropicalis
ENSSMAG00000004997rbms39968.548ENSXCOG00000019600-9568.011Xiphophorus_couchianus
ENSSMAG00000004997rbms310092.663ENSXMAG00000021783rbms310089.696Xiphophorus_maculatus
ENSSMAG00000004997rbms39983.060ENSXMAG00000014382-9978.873Xiphophorus_maculatus

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