EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000005047 (Gene tree)
Gene ID: -
Gene Symbol: calr3a
Alias: -
Full Name: calreticulin 3a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 7791 bases
Position: chr12:24280815-24288605
Accession: ZDB-GENE-000208-17
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008186	Calreticulin	PF00262.18	2.7e-85	1	2
ENSSMAP00000008186	Calreticulin	PF00262.18	2.7e-85	2	2
ENSSMAP00000008207	Calreticulin	PF00262.18	1.6e-79	1	2
ENSSMAP00000008207	Calreticulin	PF00262.18	1.6e-79	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008289	-	3542	-	ENSSMAP00000008186	540 (aa)	-	-
ENSSMAT00000008310	-	1191	-	ENSSMAP00000008207	396 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000005047	calr3a	82	71.077	ENSSMAG00000006479	calr	90	69.816
ENSSMAG00000005047	calr3a	84	72.329	ENSSMAG00000014926	calr3b	90	78.740
ENSSMAG00000005047	calr3a	72	37.135	ENSSMAG00000012101	clgn	58	36.132
ENSSMAG00000005047	calr3a	74	40.115	ENSSMAG00000007308	canx	59	40.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005047	calr3a	81	67.318	ENSAMXG00000018577	-	89	72.414	Astyanax_mexicanus
ENSSMAG00000005047	calr3a	79	68.391	ENSCAFG00000017093	CALR	93	71.842	Canis_familiaris
ENSSMAG00000005047	calr3a	76	78.667	ENSCPBG00000023916	-	90	77.108	Chrysemys_picta_bellii
ENSSMAG00000005047	calr3a	83	74.033	ENSDARG00000103979	calr3a	90	82.133	Danio_rerio
ENSSMAG00000005047	calr3a	79	68.910	FBgn0005585	Calr	91	64.151	Drosophila_melanogaster
ENSSMAG00000005047	calr3a	78	31.781	FBgn0264077	Cnx14D	54	31.792	Drosophila_melanogaster
ENSSMAG00000005047	calr3a	81	67.416	ENSEBUG00000008568	calr3a	87	71.505	Eptatretus_burgeri
ENSSMAG00000005047	calr3a	82	74.691	ENSELUG00000008294	-	87	74.251	Esox_lucius
ENSSMAG00000005047	calr3a	86	70.690	ENSFHEG00000000123	-	90	66.580	Fundulus_heteroclitus
ENSSMAG00000005047	calr3a	83	71.951	ENSMAMG00000003716	-	100	68.445	Mastacembelus_armatus
ENSSMAG00000005047	calr3a	83	64.286	ENSMMOG00000020031	-	87	69.974	Mola_mola
ENSSMAG00000005047	calr3a	79	68.588	ENSMLUG00000012776	-	91	72.105	Myotis_lucifugus
ENSSMAG00000005047	calr3a	83	54.972	ENSORLG00000017171	-	88	61.640	Oryzias_latipes
ENSSMAG00000005047	calr3a	83	70.122	ENSOMEG00000010424	-	88	71.123	Oryzias_melastigma
ENSSMAG00000005047	calr3a	76	77.888	ENSPSIG00000012928	-	90	76.705	Pelodiscus_sinensis
ENSSMAG00000005047	calr3a	72	38.081	ENSPSIG00000009344	-	61	37.215	Pelodiscus_sinensis
ENSSMAG00000005047	calr3a	72	38.304	ENSPSIG00000003895	-	68	36.896	Pelodiscus_sinensis
ENSSMAG00000005047	calr3a	81	66.947	ENSPNAG00000016813	-	89	72.074	Pygocentrus_nattereri
ENSSMAG00000005047	calr3a	72	37.135	ENSSDUG00000002378	-	54	35.878	Seriola_dumerili
ENSSMAG00000005047	calr3a	72	37.135	ENSSLDG00000020527	-	61	37.135	Seriola_lalandi_dorsalis
ENSSMAG00000005047	calr3a	82	67.778	ENSTRUG00000004597	-	88	73.351	Takifugu_rubripes
ENSSMAG00000005047	calr3a	72	37.500	ENSTRUG00000003449	-	54	36.456	Takifugu_rubripes
ENSSMAG00000005047	calr3a	83	65.470	ENSXETG00000007937	calr	89	73.118	Xenopus_tropicalis