EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000005076 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 13528 bases
Position: chr2:3405059-3418586
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	1	9
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	2	9
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	3	9
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	4	9
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	5	9
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	6	9
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	7	9
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	8	9
ENSSMAP00000008329	zf-C2H2	PF00096.26	3.8e-54	9	9
ENSSMAP00000008382	zf-C2H2	PF00096.26	5e-43	1	7
ENSSMAP00000008382	zf-C2H2	PF00096.26	5e-43	2	7
ENSSMAP00000008382	zf-C2H2	PF00096.26	5e-43	3	7
ENSSMAP00000008382	zf-C2H2	PF00096.26	5e-43	4	7
ENSSMAP00000008382	zf-C2H2	PF00096.26	5e-43	5	7
ENSSMAP00000008382	zf-C2H2	PF00096.26	5e-43	6	7
ENSSMAP00000008382	zf-C2H2	PF00096.26	5e-43	7	7
ENSSMAP00000008356	zf-C2H2	PF00096.26	3.1e-38	1	5
ENSSMAP00000008356	zf-C2H2	PF00096.26	3.1e-38	2	5
ENSSMAP00000008356	zf-C2H2	PF00096.26	3.1e-38	3	5
ENSSMAP00000008356	zf-C2H2	PF00096.26	3.1e-38	4	5
ENSSMAP00000008356	zf-C2H2	PF00096.26	3.1e-38	5	5
ENSSMAP00000008273	zf-C2H2	PF00096.26	2.3e-28	1	5
ENSSMAP00000008273	zf-C2H2	PF00096.26	2.3e-28	2	5
ENSSMAP00000008273	zf-C2H2	PF00096.26	2.3e-28	3	5
ENSSMAP00000008273	zf-C2H2	PF00096.26	2.3e-28	4	5
ENSSMAP00000008273	zf-C2H2	PF00096.26	2.3e-28	5	5
ENSSMAP00000008227	zf-C2H2	PF00096.26	4.4e-22	1	4
ENSSMAP00000008227	zf-C2H2	PF00096.26	4.4e-22	2	4
ENSSMAP00000008227	zf-C2H2	PF00096.26	4.4e-22	3	4
ENSSMAP00000008227	zf-C2H2	PF00096.26	4.4e-22	4	4
ENSSMAP00000008415	zf-C2H2	PF00096.26	1.1e-19	1	4
ENSSMAP00000008415	zf-C2H2	PF00096.26	1.1e-19	2	4
ENSSMAP00000008415	zf-C2H2	PF00096.26	1.1e-19	3	4
ENSSMAP00000008415	zf-C2H2	PF00096.26	1.1e-19	4	4
ENSSMAP00000008448	zf-C2H2	PF00096.26	2e-16	1	4
ENSSMAP00000008448	zf-C2H2	PF00096.26	2e-16	2	4
ENSSMAP00000008448	zf-C2H2	PF00096.26	2e-16	3	4
ENSSMAP00000008448	zf-C2H2	PF00096.26	2e-16	4	4
ENSSMAP00000008382	zf-met	PF12874.7	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008484	-	894	-	ENSSMAP00000008382	297 (aa)	-	-
ENSSMAT00000008460	-	810	-	ENSSMAP00000008356	269 (aa)	-	-
ENSSMAT00000008552	-	393	-	ENSSMAP00000008448	130 (aa)	-	-
ENSSMAT00000008433	-	1095	-	ENSSMAP00000008329	364 (aa)	-	-
ENSSMAT00000008376	-	750	-	ENSSMAP00000008273	249 (aa)	-	-
ENSSMAT00000008331	-	618	-	ENSSMAP00000008227	205 (aa)	-	-
ENSSMAT00000008519	-	411	-	ENSSMAP00000008415	136 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000005076	-	99	43.925	ENSSMAG00000004252	-	82	43.925
ENSSMAG00000005076	-	90	44.231	ENSSMAG00000004259	-	68	44.231
ENSSMAG00000005076	-	100	43.590	ENSSMAG00000014844	-	78	44.776
ENSSMAG00000005076	-	99	48.889	ENSSMAG00000019218	sall4	52	48.980
ENSSMAG00000005076	-	99	42.857	ENSSMAG00000015347	-	83	45.333
ENSSMAG00000005076	-	91	54.015	ENSSMAG00000008308	-	77	46.218
ENSSMAG00000005076	-	97	49.083	ENSSMAG00000003594	-	85	48.810
ENSSMAG00000005076	-	98	45.000	ENSSMAG00000009609	-	96	48.624
ENSSMAG00000005076	-	99	51.087	ENSSMAG00000006197	-	94	50.000
ENSSMAG00000005076	-	99	42.529	ENSSMAG00000019207	scrt1b	52	49.315
ENSSMAG00000005076	-	95	46.552	ENSSMAG00000015181	gfi1b	61	45.695
ENSSMAG00000005076	-	97	47.674	ENSSMAG00000019980	-	61	47.674
ENSSMAG00000005076	-	96	43.678	ENSSMAG00000018844	prdm5	74	46.471
ENSSMAG00000005076	-	98	46.237	ENSSMAG00000004429	-	93	45.833
ENSSMAG00000005076	-	90	42.045	ENSSMAG00000014597	-	58	40.698
ENSSMAG00000005076	-	99	40.789	ENSSMAG00000014864	-	83	45.679
ENSSMAG00000005076	-	88	56.250	ENSSMAG00000002782	gfi1ab	64	47.682
ENSSMAG00000005076	-	99	39.623	ENSSMAG00000000056	-	57	45.304
ENSSMAG00000005076	-	100	46.957	ENSSMAG00000007396	-	83	44.944
ENSSMAG00000005076	-	90	32.273	ENSSMAG00000001359	-	86	32.273
ENSSMAG00000005076	-	99	34.081	ENSSMAG00000001190	PRDM15	55	36.552
ENSSMAG00000005076	-	96	40.964	ENSSMAG00000008907	zbtb41	66	37.037
ENSSMAG00000005076	-	98	54.762	ENSSMAG00000009679	-	76	54.762
ENSSMAG00000005076	-	99	44.828	ENSSMAG00000021271	-	67	43.814
ENSSMAG00000005076	-	89	42.529	ENSSMAG00000005122	-	66	37.931
ENSSMAG00000005076	-	99	47.500	ENSSMAG00000013828	-	65	44.843
ENSSMAG00000005076	-	93	38.824	ENSSMAG00000000404	-	99	36.719
ENSSMAG00000005076	-	100	56.061	ENSSMAG00000013663	-	90	54.271
ENSSMAG00000005076	-	98	43.299	ENSSMAG00000007561	znf236	79	41.935
ENSSMAG00000005076	-	92	40.000	ENSSMAG00000019364	snai2	92	36.567
ENSSMAG00000005076	-	91	53.968	ENSSMAG00000019949	-	96	53.968
ENSSMAG00000005076	-	99	46.429	ENSSMAG00000015849	znf319b	95	40.361
ENSSMAG00000005076	-	95	46.939	ENSSMAG00000009020	znf526	71	31.534
ENSSMAG00000005076	-	99	45.161	ENSSMAG00000015356	-	77	40.948
ENSSMAG00000005076	-	100	49.485	ENSSMAG00000021251	-	98	48.571
ENSSMAG00000005076	-	97	44.444	ENSSMAG00000012378	znf646	74	42.708
ENSSMAG00000005076	-	95	41.270	ENSSMAG00000002391	ZNF319	95	36.771
ENSSMAG00000005076	-	98	43.137	ENSSMAG00000006825	-	83	46.448
ENSSMAG00000005076	-	92	40.698	ENSSMAG00000008834	-	55	44.156
ENSSMAG00000005076	-	87	53.968	ENSSMAG00000017045	-	54	53.968
ENSSMAG00000005076	-	79	35.537	ENSSMAG00000003204	zgc:171929	66	35.714
ENSSMAG00000005076	-	98	43.590	ENSSMAG00000013676	-	84	51.695
ENSSMAG00000005076	-	96	44.355	ENSSMAG00000015041	si:dkey-7i4.5	90	49.711
ENSSMAG00000005076	-	98	40.179	ENSSMAG00000015282	-	77	43.662
ENSSMAG00000005076	-	90	41.284	ENSSMAG00000002798	-	56	41.284
ENSSMAG00000005076	-	96	47.253	ENSSMAG00000005081	-	84	48.387
ENSSMAG00000005076	-	96	40.351	ENSSMAG00000007380	znf710b	50	34.859
ENSSMAG00000005076	-	99	37.719	ENSSMAG00000020844	patz1	68	36.310
ENSSMAG00000005076	-	99	56.250	ENSSMAG00000009115	-	96	56.364
ENSSMAG00000005076	-	98	51.389	ENSSMAG00000013291	-	94	51.389
ENSSMAG00000005076	-	88	63.158	ENSSMAG00000009685	-	81	63.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005076	-	100	54.545	ENSG00000062370	ZNF112	75	57.616	Homo_sapiens
ENSSMAG00000005076	-	98	71.795	ENSAMEG00000012925	ZNF112	75	56.054	Ailuropoda_melanoleuca
ENSSMAG00000005076	-	99	54.545	ENSANAG00000033378	ZNF112	78	54.114	Aotus_nancymaae
ENSSMAG00000005076	-	98	61.538	ENSBTAG00000040209	ZNF112	81	55.217	Bos_taurus
ENSSMAG00000005076	-	96	57.616	ENSCJAG00000013266	ZNF112	74	57.616	Callithrix_jacchus
ENSSMAG00000005076	-	98	62.000	ENSCAFG00020009015	ZNF112	76	56.054	Canis_lupus_dingo
ENSSMAG00000005076	-	98	56.338	ENSCHIG00000027072	ZNF112	75	55.310	Capra_hircus
ENSSMAG00000005076	-	98	58.571	ENSTSYG00000032827	-	84	53.797	Carlito_syrichta
ENSSMAG00000005076	-	91	58.571	ENSCPOG00000035016	ZNF112	83	55.157	Cavia_porcellus
ENSSMAG00000005076	-	98	55.605	ENSCCAG00000026676	ZNF112	76	57.143	Cebus_capucinus
ENSSMAG00000005076	-	97	56.391	ENSCLAG00000003483	ZNF112	79	54.260	Chinchilla_lanigera
ENSSMAG00000005076	-	100	59.420	ENSCSAG00000003321	ZNF112	79	57.619	Chlorocebus_sabaeus
ENSSMAG00000005076	-	91	73.684	ENSCHOG00000011095	ZNF112	70	73.684	Choloepus_hoffmanni
ENSSMAG00000005076	-	99	57.971	ENSCANG00000011432	ZNF112	76	57.143	Colobus_angolensis_palliatus
ENSSMAG00000005076	-	100	52.066	ENSCGRG00001017579	Zfp112	71	52.427	Cricetulus_griseus_chok1gshd
ENSSMAG00000005076	-	90	71.429	ENSCGRG00000015327	Zfp112	69	58.940	Cricetulus_griseus_crigri
ENSSMAG00000005076	-	99	60.377	ENSDNOG00000036715	ZNF112	72	60.377	Dasypus_novemcinctus
ENSSMAG00000005076	-	99	55.000	ENSEASG00005013640	ZNF112	80	54.348	Equus_asinus_asinus
ENSSMAG00000005076	-	98	56.054	ENSECAG00000000345	ZNF112	82	56.115	Equus_caballus
ENSSMAG00000005076	-	98	61.538	ENSFCAG00000031825	ZNF112	78	61.538	Felis_catus
ENSSMAG00000005076	-	100	54.545	ENSGGOG00000009876	ZNF112	77	57.619	Gorilla_gorilla
ENSSMAG00000005076	-	99	61.538	ENSSTOG00000013458	ZNF112	74	56.075	Ictidomys_tridecemlineatus
ENSSMAG00000005076	-	99	58.571	ENSMFAG00000031747	ZNF112	76	57.143	Macaca_fascicularis
ENSSMAG00000005076	-	99	58.571	ENSMMUG00000012802	ZNF112	76	57.619	Macaca_mulatta
ENSSMAG00000005076	-	99	58.571	ENSMNEG00000029259	ZNF112	77	57.619	Macaca_nemestrina
ENSSMAG00000005076	-	99	58.571	ENSMLEG00000033143	ZNF112	76	57.619	Mandrillus_leucophaeus
ENSSMAG00000005076	-	99	58.571	ENSMICG00000004974	ZNF112	78	55.605	Microcebus_murinus
ENSSMAG00000005076	-	94	55.319	MGP_CAROLIEiJ_G0029324	Zfp111	76	56.701	Mus_caroli
ENSSMAG00000005076	-	94	56.291	MGP_CAROLIEiJ_G0029321	Zfp112	56	56.291	Mus_caroli
ENSSMAG00000005076	-	94	56.115	ENSMUSG00000087598	Zfp111	71	57.407	Mus_musculus
ENSSMAG00000005076	-	93	56.291	ENSMUSG00000052675	Zfp112	59	52.997	Mus_musculus
ENSSMAG00000005076	-	99	52.193	MGP_PahariEiJ_G0021172	Zfp112	69	54.709	Mus_pahari
ENSSMAG00000005076	-	93	56.291	MGP_SPRETEiJ_G0030415	Zfp112	55	56.291	Mus_spretus
ENSSMAG00000005076	-	98	62.000	ENSMPUG00000006469	ZNF112	76	56.054	Mustela_putorius_furo
ENSSMAG00000005076	-	93	56.954	ENSMLUG00000014654	ZNF112	72	56.054	Myotis_lucifugus
ENSSMAG00000005076	-	100	54.545	ENSNLEG00000001942	ZNF112	76	57.143	Nomascus_leucogenys
ENSSMAG00000005076	-	96	58.571	ENSODEG00000009193	ZNF112	73	52.848	Octodon_degus
ENSSMAG00000005076	-	100	54.545	ENSPPAG00000040429	ZNF112	77	57.619	Pan_paniscus
ENSSMAG00000005076	-	98	61.538	ENSPPRG00000015186	ZNF112	75	56.054	Panthera_pardus
ENSSMAG00000005076	-	98	61.538	ENSPTIG00000002831	ZNF112	76	56.054	Panthera_tigris_altaica
ENSSMAG00000005076	-	100	54.545	ENSPTRG00000011113	ZNF112	76	57.619	Pan_troglodytes
ENSSMAG00000005076	-	99	58.571	ENSPANG00000031231	ZNF112	76	57.143	Papio_anubis
ENSSMAG00000005076	-	98	55.656	ENSPPYG00000010087	ZNF112	75	57.619	Pongo_abelii
ENSSMAG00000005076	-	99	56.667	ENSPCOG00000022725	ZNF112	79	55.605	Propithecus_coquereli
ENSSMAG00000005076	-	99	60.377	ENSPVAG00000004394	ZNF112	75	56.054	Pteropus_vampyrus
ENSSMAG00000005076	-	99	57.971	ENSRBIG00000015261	ZNF112	76	57.619	Rhinopithecus_bieti
ENSSMAG00000005076	-	100	57.971	ENSRROG00000035120	ZNF112	76	57.619	Rhinopithecus_roxellana
ENSSMAG00000005076	-	99	54.545	ENSSBOG00000023651	ZNF112	76	55.204	Saimiri_boliviensis_boliviensis
ENSSMAG00000005076	-	98	55.814	ENSSSCG00000003077	ZNF112	71	69.231	Sus_scrofa
ENSSMAG00000005076	-	99	58.571	ENSTBEG00000014400	ZNF112	76	56.054	Tupaia_belangeri
ENSSMAG00000005076	-	98	61.538	ENSTTRG00000006712	ZNF112	75	55.605	Tursiops_truncatus
ENSSMAG00000005076	-	98	54.545	ENSUAMG00000014969	ZNF112	77	56.054	Ursus_americanus
ENSSMAG00000005076	-	98	61.538	ENSVVUG00000008575	ZNF112	81	56.054	Vulpes_vulpes