EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000005081 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 7818 bases
Position: chr2:21282133-21289950
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	1	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	2	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	3	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	4	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	5	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	6	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	7	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	8	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	9	10
ENSSMAP00000008260	zf-C2H2	PF00096.26	1.7e-63	10	10
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	1	9
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	2	9
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	3	9
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	4	9
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	5	9
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	6	9
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	7	9
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	8	9
ENSSMAP00000008216	zf-C2H2	PF00096.26	1e-62	9	9
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	1	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	2	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	3	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	4	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	5	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	6	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	7	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	8	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	9	10
ENSSMAP00000008253	zf-C2H2	PF00096.26	2.6e-61	10	10
ENSSMAP00000008253	zf-met	PF12874.7	2.7e-12	1	2
ENSSMAP00000008253	zf-met	PF12874.7	2.7e-12	2	2
ENSSMAP00000008260	zf-met	PF12874.7	8.2e-11	1	1
ENSSMAP00000008216	zf-met	PF12874.7	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008363	-	4205	-	ENSSMAP00000008260	1007 (aa)	-	-
ENSSMAT00000008356	-	2205	-	ENSSMAP00000008253	734 (aa)	-	-
ENSSMAT00000008320	-	5252	-	ENSSMAP00000008216	1088 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005081's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000005081	-	78	34.884	ENSSMAG00000012378	znf646	98	34.884
ENSSMAG00000005081	-	80	43.860	ENSSMAG00000017045	-	57	44.318
ENSSMAG00000005081	-	99	35.529	ENSSMAG00000002031	-	97	35.671
ENSSMAG00000005081	-	83	35.650	ENSSMAG00000017494	-	52	34.500
ENSSMAG00000005081	-	83	30.894	ENSSMAG00000009020	znf526	61	33.414
ENSSMAG00000005081	-	82	39.130	ENSSMAG00000015181	gfi1b	59	39.130
ENSSMAG00000005081	-	73	41.146	ENSSMAG00000006825	-	96	41.146
ENSSMAG00000005081	-	52	38.843	ENSSMAG00000003204	zgc:171929	54	42.857
ENSSMAG00000005081	-	81	35.533	ENSSMAG00000007380	znf710b	50	35.533
ENSSMAG00000005081	-	84	41.714	ENSSMAG00000014844	-	68	41.714
ENSSMAG00000005081	-	93	36.242	ENSSMAG00000015347	-	97	39.583
ENSSMAG00000005081	-	86	34.266	ENSSMAG00000019980	-	68	31.683
ENSSMAG00000005081	-	83	44.000	ENSSMAG00000003594	-	94	44.000
ENSSMAG00000005081	-	87	44.000	ENSSMAG00000013663	-	91	51.064
ENSSMAG00000005081	-	83	36.184	ENSSMAG00000016425	zbtb16a	57	35.616
ENSSMAG00000005081	-	83	35.731	ENSSMAG00000018844	prdm5	83	34.409
ENSSMAG00000005081	-	84	38.793	ENSSMAG00000013828	-	62	42.174
ENSSMAG00000005081	-	80	35.333	ENSSMAG00000004429	-	90	35.570
ENSSMAG00000005081	-	79	36.429	ENSSMAG00000002598	-	63	36.429
ENSSMAG00000005081	-	94	43.558	ENSSMAG00000021251	-	96	41.587
ENSSMAG00000005081	-	82	34.328	ENSSMAG00000002899	znf131	53	36.066
ENSSMAG00000005081	-	83	42.795	ENSSMAG00000006197	-	99	42.795
ENSSMAG00000005081	-	92	46.392	ENSSMAG00000009685	-	99	46.392
ENSSMAG00000005081	-	91	44.318	ENSSMAG00000009115	-	99	41.549
ENSSMAG00000005081	-	81	35.526	ENSSMAG00000007396	-	95	31.797
ENSSMAG00000005081	-	78	38.806	ENSSMAG00000009609	-	99	46.667
ENSSMAG00000005081	-	85	44.643	ENSSMAG00000007561	znf236	78	42.857
ENSSMAG00000005081	-	85	38.686	ENSSMAG00000004252	-	87	34.286
ENSSMAG00000005081	-	50	49.367	ENSSMAG00000004259	-	60	49.367
ENSSMAG00000005081	-	82	33.333	ENSSMAG00000006473	znf341	55	33.621
ENSSMAG00000005081	-	82	37.402	ENSSMAG00000019949	-	64	52.632
ENSSMAG00000005081	-	76	38.235	ENSSMAG00000000404	-	93	38.235
ENSSMAG00000005081	-	83	47.664	ENSSMAG00000006902	-	56	47.664
ENSSMAG00000005081	-	81	35.821	ENSSMAG00000005122	-	67	35.821
ENSSMAG00000005081	-	98	37.079	ENSSMAG00000013291	-	92	42.268
ENSSMAG00000005081	-	74	40.741	ENSSMAG00000014720	e4f1	69	40.741
ENSSMAG00000005081	-	83	37.449	ENSSMAG00000007679	zbtb16b	53	37.449
ENSSMAG00000005081	-	79	33.088	ENSSMAG00000019364	snai2	57	33.088
ENSSMAG00000005081	-	88	36.982	ENSSMAG00000013676	-	93	36.982
ENSSMAG00000005081	-	99	37.304	ENSSMAG00000000183	-	94	37.383
ENSSMAG00000005081	-	82	39.535	ENSSMAG00000021271	-	78	39.535
ENSSMAG00000005081	-	72	37.594	ENSSMAG00000019207	scrt1b	74	37.594
ENSSMAG00000005081	-	54	50.000	ENSSMAG00000009679	-	77	50.000
ENSSMAG00000005081	-	80	40.714	ENSSMAG00000014597	-	68	40.714
ENSSMAG00000005081	-	85	32.734	ENSSMAG00000015356	-	93	37.952
ENSSMAG00000005081	-	82	30.387	ENSSMAG00000002391	ZNF319	95	30.387
ENSSMAG00000005081	-	98	34.853	ENSSMAG00000000056	-	97	34.853
ENSSMAG00000005081	-	81	37.079	ENSSMAG00000020844	patz1	71	37.079
ENSSMAG00000005081	-	81	39.175	ENSSMAG00000015041	si:dkey-7i4.5	99	37.092
ENSSMAG00000005081	-	69	32.215	ENSSMAG00000008834	-	53	32.278
ENSSMAG00000005081	-	58	44.048	ENSSMAG00000002798	-	61	44.048
ENSSMAG00000005081	-	81	40.580	ENSSMAG00000006797	gfi1aa	54	40.580
ENSSMAG00000005081	-	72	31.707	ENSSMAG00000015282	-	79	30.674
ENSSMAG00000005081	-	84	48.387	ENSSMAG00000005076	-	96	47.253
ENSSMAG00000005081	-	65	37.838	ENSSMAG00000013652	snai1a	72	37.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005081	-	99	84.559	ENSAPOG00000003028	-	99	84.680	Acanthochromis_polyacanthus
ENSSMAG00000005081	-	99	85.587	ENSATEG00000023044	-	99	85.915	Anabas_testudineus
ENSSMAG00000005081	-	99	82.878	ENSACLG00000016841	-	99	82.969	Astatotilapia_calliptera
ENSSMAG00000005081	-	99	82.428	ENSCSEG00000004721	-	99	81.735	Cynoglossus_semilaevis
ENSSMAG00000005081	-	99	76.115	ENSFHEG00000003583	-	99	76.477	Fundulus_heteroclitus
ENSSMAG00000005081	-	99	35.532	ENSKMAG00000003402	-	97	35.532	Kryptolebias_marmoratus
ENSSMAG00000005081	-	99	85.587	ENSMAMG00000015670	-	98	85.661	Mastacembelus_armatus
ENSSMAG00000005081	-	99	82.878	ENSMZEG00005001313	-	99	82.969	Maylandia_zebra
ENSSMAG00000005081	-	83	31.068	ENSMMOG00000020682	-	87	33.562	Mola_mola
ENSSMAG00000005081	-	96	80.973	ENSMALG00000011860	-	90	81.189	Monopterus_albus
ENSSMAG00000005081	-	90	81.745	ENSNBRG00000010987	-	100	81.745	Neolamprologus_brichardi
ENSSMAG00000005081	-	86	78.862	ENSONIG00000017799	-	99	78.862	Oreochromis_niloticus
ENSSMAG00000005081	-	99	78.131	ENSORLG00000027418	-	98	78.725	Oryzias_latipes
ENSSMAG00000005081	-	99	78.032	ENSORLG00020008744	-	99	78.430	Oryzias_latipes_hni
ENSSMAG00000005081	-	99	78.032	ENSORLG00015007973	-	98	78.632	Oryzias_latipes_hsok
ENSSMAG00000005081	-	99	78.282	ENSOMEG00000003451	-	98	74.414	Oryzias_melastigma
ENSSMAG00000005081	-	99	77.986	ENSPREG00000007135	-	98	77.747	Poecilia_reticulata
ENSSMAG00000005081	-	99	87.278	ENSSDUG00000016734	-	99	86.770	Seriola_dumerili
ENSSMAG00000005081	-	99	87.500	ENSSLDG00000004485	-	99	87.044	Seriola_lalandi_dorsalis
ENSSMAG00000005081	-	99	84.911	ENSSPAG00000003796	-	99	84.854	Stegastes_partitus
ENSSMAG00000005081	-	99	79.208	ENSTRUG00000025881	-	99	79.121	Takifugu_rubripes
ENSSMAG00000005081	-	99	62.751	ENSXMAG00000024762	-	99	60.036	Xiphophorus_maculatus