EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000005096 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3459 bases
Position: chr8:17677655-17681113
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008249	RtcB	PF01139.17	1.6e-147	1	1
ENSSMAP00000008276	RtcB	PF01139.17	5.6e-143	1	1
ENSSMAP00000008322	RtcB	PF01139.17	6.1e-134	1	1
ENSSMAP00000008288	RtcB	PF01139.17	7.5e-134	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008379	-	1503	-	ENSSMAP00000008276	500 (aa)	-	-
ENSSMAT00000008352	-	1617	-	ENSSMAP00000008249	538 (aa)	-	-
ENSSMAT00000008426	-	1572	-	ENSSMAP00000008322	523 (aa)	-	-
ENSSMAT00000008392	-	1671	-	ENSSMAP00000008288	556 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005096	rtcb	100	90.693	ENSG00000100220	RTCB	100	90.693	Homo_sapiens
ENSSMAG00000005096	rtcb	100	93.861	ENSAPOG00000006040	rtcb	100	93.861	Acanthochromis_polyacanthus
ENSSMAG00000005096	rtcb	100	90.891	ENSAMEG00000016152	RTCB	100	90.891	Ailuropoda_melanoleuca
ENSSMAG00000005096	rtcb	100	88.713	ENSACIG00000009083	rtcb	100	88.713	Amphilophus_citrinellus
ENSSMAG00000005096	rtcb	100	94.257	ENSAOCG00000005662	rtcb	100	94.783	Amphiprion_ocellaris
ENSSMAG00000005096	rtcb	96	89.322	ENSAPEG00000024653	rtcb	96	94.714	Amphiprion_percula
ENSSMAG00000005096	rtcb	100	94.257	ENSAPEG00000024701	rtcb	100	94.257	Amphiprion_percula
ENSSMAG00000005096	rtcb	100	94.059	ENSATEG00000000618	rtcb	100	94.059	Anabas_testudineus
ENSSMAG00000005096	rtcb	100	88.054	ENSACAG00000014817	RTCB	100	88.054	Anolis_carolinensis
ENSSMAG00000005096	rtcb	74	97.222	ENSANAG00000023724	-	86	97.222	Aotus_nancymaae
ENSSMAG00000005096	rtcb	100	75.644	ENSANAG00000018191	-	91	75.644	Aotus_nancymaae
ENSSMAG00000005096	rtcb	100	91.881	ENSACLG00000008367	rtcb	100	92.826	Astatotilapia_calliptera
ENSSMAG00000005096	rtcb	100	93.861	ENSAMXG00000042320	rtcb	100	93.861	Astyanax_mexicanus
ENSSMAG00000005096	rtcb	100	90.693	ENSBTAG00000011070	RTCB	100	90.693	Bos_taurus
ENSSMAG00000005096	rtcb	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSSMAG00000005096	rtcb	100	90.495	ENSCJAG00000006128	RTCB	100	90.495	Callithrix_jacchus
ENSSMAG00000005096	rtcb	100	90.891	ENSCAFG00000001785	RTCB	100	90.891	Canis_familiaris
ENSSMAG00000005096	rtcb	100	86.733	ENSCAFG00000010789	-	100	86.733	Canis_familiaris
ENSSMAG00000005096	rtcb	87	86.364	ENSCAFG00020018953	-	99	88.409	Canis_lupus_dingo
ENSSMAG00000005096	rtcb	100	90.891	ENSCAFG00020004890	-	100	90.891	Canis_lupus_dingo
ENSSMAG00000005096	rtcb	100	90.891	ENSCHIG00000027009	-	100	90.891	Capra_hircus
ENSSMAG00000005096	rtcb	100	90.693	ENSTSYG00000012320	RTCB	100	90.693	Carlito_syrichta
ENSSMAG00000005096	rtcb	94	90.776	ENSCAPG00000011647	RTCB	96	90.776	Cavia_aperea
ENSSMAG00000005096	rtcb	100	90.495	ENSCCAG00000000618	RTCB	100	90.495	Cebus_capucinus
ENSSMAG00000005096	rtcb	100	90.297	ENSCATG00000033424	RTCB	100	90.297	Cercocebus_atys
ENSSMAG00000005096	rtcb	100	90.693	ENSCLAG00000007997	RTCB	100	90.693	Chinchilla_lanigera
ENSSMAG00000005096	rtcb	100	90.099	ENSCSAG00000008351	RTCB	100	90.099	Chlorocebus_sabaeus
ENSSMAG00000005096	rtcb	100	77.228	ENSCHOG00000009123	RTCB	100	77.228	Choloepus_hoffmanni
ENSSMAG00000005096	rtcb	100	90.495	ENSCPBG00000023184	RTCB	100	90.495	Chrysemys_picta_bellii
ENSSMAG00000005096	rtcb	100	79.604	ENSCING00000003830	-	100	79.604	Ciona_intestinalis
ENSSMAG00000005096	rtcb	100	79.802	ENSCSAVG00000008124	-	100	81.093	Ciona_savignyi
ENSSMAG00000005096	rtcb	100	86.535	ENSCANG00000001891	RTCB	97	91.121	Colobus_angolensis_palliatus
ENSSMAG00000005096	rtcb	100	90.693	ENSCGRG00001011173	Rtcb	100	90.693	Cricetulus_griseus_chok1gshd
ENSSMAG00000005096	rtcb	93	91.083	ENSCGRG00000009587	-	96	91.083	Cricetulus_griseus_crigri
ENSSMAG00000005096	rtcb	100	94.059	ENSCSEG00000003986	rtcb	100	94.059	Cynoglossus_semilaevis
ENSSMAG00000005096	rtcb	84	91.553	ENSCVAG00000000569	rtcb	99	91.553	Cyprinodon_variegatus
ENSSMAG00000005096	rtcb	100	94.257	ENSDARG00000101047	rtcb	100	94.257	Danio_rerio
ENSSMAG00000005096	rtcb	80	86.241	ENSDNOG00000012425	RTCB	99	88.452	Dasypus_novemcinctus
ENSSMAG00000005096	rtcb	100	90.693	ENSDORG00000010855	Rtcb	100	90.693	Dipodomys_ordii
ENSSMAG00000005096	rtcb	99	82.107	FBgn0032781	RtcB	99	82.107	Drosophila_melanogaster
ENSSMAG00000005096	rtcb	100	85.545	ENSETEG00000001988	RTCB	100	85.545	Echinops_telfairi
ENSSMAG00000005096	rtcb	100	84.356	ENSEBUG00000014235	rtcb	100	84.356	Eptatretus_burgeri
ENSSMAG00000005096	rtcb	100	90.891	ENSEASG00005019059	RTCB	100	90.891	Equus_asinus_asinus
ENSSMAG00000005096	rtcb	100	90.891	ENSECAG00000023998	RTCB	100	90.891	Equus_caballus
ENSSMAG00000005096	rtcb	88	82.063	ENSEEUG00000006251	RTCB	99	84.081	Erinaceus_europaeus
ENSSMAG00000005096	rtcb	100	81.096	ENSELUG00000009275	rtcb	100	81.096	Esox_lucius
ENSSMAG00000005096	rtcb	100	90.693	ENSFCAG00000026480	RTCB	100	90.693	Felis_catus
ENSSMAG00000005096	rtcb	100	91.287	ENSFALG00000013334	RTCB	100	91.287	Ficedula_albicollis
ENSSMAG00000005096	rtcb	100	90.495	ENSFDAG00000018150	RTCB	100	90.495	Fukomys_damarensis
ENSSMAG00000005096	rtcb	100	93.267	ENSFHEG00000009595	rtcb	100	93.267	Fundulus_heteroclitus
ENSSMAG00000005096	rtcb	100	91.089	ENSGMOG00000018882	rtcb	100	91.089	Gadus_morhua
ENSSMAG00000005096	rtcb	100	90.693	ENSGALG00000012611	RTCB	100	90.693	Gallus_gallus
ENSSMAG00000005096	rtcb	100	93.267	ENSGAFG00000004198	rtcb	100	93.267	Gambusia_affinis
ENSSMAG00000005096	rtcb	100	93.861	ENSGACG00000000586	rtcb	100	93.861	Gasterosteus_aculeatus
ENSSMAG00000005096	rtcb	93	89.574	ENSGAGG00000019133	RTCB	99	90.417	Gopherus_agassizii
ENSSMAG00000005096	rtcb	100	90.693	ENSGGOG00000011402	RTCB	100	90.693	Gorilla_gorilla
ENSSMAG00000005096	rtcb	100	91.881	ENSHBUG00000020571	rtcb	100	91.881	Haplochromis_burtoni
ENSSMAG00000005096	rtcb	100	90.495	ENSHGLG00000004492	RTCB	100	90.495	Heterocephalus_glaber_female
ENSSMAG00000005096	rtcb	93	66.379	ENSHGLG00000001066	-	99	66.379	Heterocephalus_glaber_female
ENSSMAG00000005096	rtcb	100	90.495	ENSHGLG00100008965	RTCB	100	90.495	Heterocephalus_glaber_male
ENSSMAG00000005096	rtcb	100	91.716	ENSHCOG00000006450	rtcb	100	91.716	Hippocampus_comes
ENSSMAG00000005096	rtcb	100	92.079	ENSIPUG00000015443	rtcb	100	92.079	Ictalurus_punctatus
ENSSMAG00000005096	rtcb	100	90.495	ENSSTOG00000003878	RTCB	100	90.495	Ictidomys_tridecemlineatus
ENSSMAG00000005096	rtcb	100	90.495	ENSJJAG00000010667	Rtcb	100	90.495	Jaculus_jaculus
ENSSMAG00000005096	rtcb	100	94.455	ENSKMAG00000013178	rtcb	100	94.455	Kryptolebias_marmoratus
ENSSMAG00000005096	rtcb	100	92.475	ENSLBEG00000000214	rtcb	100	92.475	Labrus_bergylta
ENSSMAG00000005096	rtcb	100	93.465	ENSLBEG00000010566	RTCB	100	93.465	Labrus_bergylta
ENSSMAG00000005096	rtcb	100	91.485	ENSLACG00000013033	RTCB	100	91.485	Latimeria_chalumnae
ENSSMAG00000005096	rtcb	100	93.069	ENSLOCG00000016515	rtcb	99	93.069	Lepisosteus_oculatus
ENSSMAG00000005096	rtcb	100	90.495	ENSLAFG00000002082	RTCB	100	90.495	Loxodonta_africana
ENSSMAG00000005096	rtcb	100	90.099	ENSMFAG00000034419	RTCB	100	90.099	Macaca_fascicularis
ENSSMAG00000005096	rtcb	100	90.099	ENSMMUG00000006720	RTCB	100	90.099	Macaca_mulatta
ENSSMAG00000005096	rtcb	100	90.099	ENSMNEG00000040669	RTCB	100	90.099	Macaca_nemestrina
ENSSMAG00000005096	rtcb	100	90.297	ENSMLEG00000040505	RTCB	100	90.297	Mandrillus_leucophaeus
ENSSMAG00000005096	rtcb	100	93.663	ENSMAMG00000020676	rtcb	100	93.663	Mastacembelus_armatus
ENSSMAG00000005096	rtcb	100	91.881	ENSMZEG00005018942	rtcb	100	91.881	Maylandia_zebra
ENSSMAG00000005096	rtcb	100	90.335	ENSMGAG00000012805	RTCB	100	90.335	Meleagris_gallopavo
ENSSMAG00000005096	rtcb	62	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSSMAG00000005096	rtcb	100	90.495	ENSMICG00000013303	-	100	90.495	Microcebus_murinus
ENSSMAG00000005096	rtcb	100	71.881	ENSMICG00000036677	-	100	71.881	Microcebus_murinus
ENSSMAG00000005096	rtcb	100	91.089	ENSMOCG00000002440	Rtcb	100	91.089	Microtus_ochrogaster
ENSSMAG00000005096	rtcb	100	93.663	ENSMMOG00000005987	rtcb	100	93.663	Mola_mola
ENSSMAG00000005096	rtcb	100	91.089	ENSMODG00000001414	RTCB	100	91.089	Monodelphis_domestica
ENSSMAG00000005096	rtcb	100	93.663	ENSMALG00000007603	rtcb	100	93.663	Monopterus_albus
ENSSMAG00000005096	rtcb	100	90.693	MGP_CAROLIEiJ_G0015689	Rtcb	100	90.693	Mus_caroli
ENSSMAG00000005096	rtcb	100	90.693	ENSMUSG00000001783	Rtcb	100	90.693	Mus_musculus
ENSSMAG00000005096	rtcb	100	90.693	MGP_PahariEiJ_G0031396	Rtcb	100	90.693	Mus_pahari
ENSSMAG00000005096	rtcb	100	90.693	MGP_SPRETEiJ_G0016507	Rtcb	100	90.693	Mus_spretus
ENSSMAG00000005096	rtcb	100	90.891	ENSMPUG00000012285	RTCB	100	90.891	Mustela_putorius_furo
ENSSMAG00000005096	rtcb	100	88.166	ENSMLUG00000007803	RTCB	100	88.166	Myotis_lucifugus
ENSSMAG00000005096	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSSMAG00000005096	rtcb	100	92.079	ENSNBRG00000017202	rtcb	100	92.079	Neolamprologus_brichardi
ENSSMAG00000005096	rtcb	100	90.693	ENSNLEG00000004960	RTCB	100	90.693	Nomascus_leucogenys
ENSSMAG00000005096	rtcb	83	87.719	ENSMEUG00000007809	-	89	87.719	Notamacropus_eugenii
ENSSMAG00000005096	rtcb	75	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSSMAG00000005096	rtcb	100	60.594	ENSODEG00000005042	-	100	60.594	Octodon_degus
ENSSMAG00000005096	rtcb	83	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSSMAG00000005096	rtcb	100	92.673	ENSONIG00000007474	rtcb	100	92.673	Oreochromis_niloticus
ENSSMAG00000005096	rtcb	100	90.891	ENSOANG00000005524	RTCB	100	90.891	Ornithorhynchus_anatinus
ENSSMAG00000005096	rtcb	93	90.000	ENSOCUG00000008270	RTCB	97	91.561	Oryctolagus_cuniculus
ENSSMAG00000005096	rtcb	100	93.069	ENSORLG00000020093	rtcb	100	93.069	Oryzias_latipes
ENSSMAG00000005096	rtcb	100	93.069	ENSORLG00020003706	rtcb	100	93.069	Oryzias_latipes_hni
ENSSMAG00000005096	rtcb	100	93.267	ENSORLG00015002968	rtcb	100	93.267	Oryzias_latipes_hsok
ENSSMAG00000005096	rtcb	100	92.673	ENSOMEG00000021278	rtcb	100	92.673	Oryzias_melastigma
ENSSMAG00000005096	rtcb	100	89.901	ENSOGAG00000001425	RTCB	100	89.901	Otolemur_garnettii
ENSSMAG00000005096	rtcb	100	90.891	ENSOARG00000018008	RTCB	100	90.891	Ovis_aries
ENSSMAG00000005096	rtcb	100	90.693	ENSPPAG00000028667	RTCB	100	90.693	Pan_paniscus
ENSSMAG00000005096	rtcb	100	90.693	ENSPPRG00000004038	RTCB	100	90.693	Panthera_pardus
ENSSMAG00000005096	rtcb	94	86.526	ENSPTIG00000020499	RTCB	97	87.579	Panthera_tigris_altaica
ENSSMAG00000005096	rtcb	100	90.693	ENSPTRG00000014287	RTCB	100	90.693	Pan_troglodytes
ENSSMAG00000005096	rtcb	100	90.099	ENSPANG00000016035	RTCB	100	90.099	Papio_anubis
ENSSMAG00000005096	rtcb	100	92.871	ENSPKIG00000001881	rtcb	100	92.871	Paramormyrops_kingsleyae
ENSSMAG00000005096	rtcb	91	90.870	ENSPSIG00000011690	RTCB	100	90.870	Pelodiscus_sinensis
ENSSMAG00000005096	rtcb	100	94.455	ENSPMGG00000016672	rtcb	100	94.455	Periophthalmus_magnuspinnatus
ENSSMAG00000005096	rtcb	100	90.693	ENSPEMG00000019548	Rtcb	100	90.693	Peromyscus_maniculatus_bairdii
ENSSMAG00000005096	rtcb	100	88.119	ENSPMAG00000005657	rtcb	100	88.119	Petromyzon_marinus
ENSSMAG00000005096	rtcb	100	91.089	ENSPCIG00000009467	RTCB	100	91.089	Phascolarctos_cinereus
ENSSMAG00000005096	rtcb	100	93.267	ENSPFOG00000003058	rtcb	100	93.267	Poecilia_formosa
ENSSMAG00000005096	rtcb	100	93.465	ENSPLAG00000017663	rtcb	100	93.465	Poecilia_latipinna
ENSSMAG00000005096	rtcb	100	93.267	ENSPMEG00000006227	rtcb	100	93.267	Poecilia_mexicana
ENSSMAG00000005096	rtcb	100	92.871	ENSPREG00000018467	rtcb	100	92.871	Poecilia_reticulata
ENSSMAG00000005096	rtcb	100	90.693	ENSPPYG00000011752	RTCB	100	90.693	Pongo_abelii
ENSSMAG00000005096	rtcb	93	73.729	ENSPCAG00000013641	RTCB	100	75.636	Procavia_capensis
ENSSMAG00000005096	rtcb	100	90.297	ENSPCOG00000017243	RTCB	100	90.297	Propithecus_coquereli
ENSSMAG00000005096	rtcb	93	89.149	ENSPVAG00000002380	RTCB	100	91.064	Pteropus_vampyrus
ENSSMAG00000005096	rtcb	100	91.881	ENSPNYG00000022760	rtcb	100	91.881	Pundamilia_nyererei
ENSSMAG00000005096	rtcb	100	93.465	ENSPNAG00000009209	rtcb	100	93.465	Pygocentrus_nattereri
ENSSMAG00000005096	rtcb	100	90.693	ENSRNOG00000004813	Rtcb	100	90.693	Rattus_norvegicus
ENSSMAG00000005096	rtcb	100	82.609	ENSRBIG00000042090	RTCB	100	82.609	Rhinopithecus_bieti
ENSSMAG00000005096	rtcb	100	85.941	ENSSBOG00000020085	-	100	85.941	Saimiri_boliviensis_boliviensis
ENSSMAG00000005096	rtcb	94	91.139	ENSSHAG00000016277	RTCB	100	91.139	Sarcophilus_harrisii
ENSSMAG00000005096	rtcb	100	92.871	ENSSFOG00015000763	rtcb	100	92.871	Scleropages_formosus
ENSSMAG00000005096	rtcb	100	90.891	ENSSFOG00015011572	RTCB	100	90.891	Scleropages_formosus
ENSSMAG00000005096	rtcb	100	94.257	ENSSDUG00000012605	rtcb	100	94.257	Seriola_dumerili
ENSSMAG00000005096	rtcb	100	94.059	ENSSLDG00000019458	rtcb	100	94.059	Seriola_lalandi_dorsalis
ENSSMAG00000005096	rtcb	68	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSSMAG00000005096	rtcb	100	89.901	ENSSPUG00000012814	RTCB	100	89.901	Sphenodon_punctatus
ENSSMAG00000005096	rtcb	100	94.257	ENSSPAG00000004623	rtcb	100	94.257	Stegastes_partitus
ENSSMAG00000005096	rtcb	100	90.693	ENSSSCG00000000158	RTCB	100	90.693	Sus_scrofa
ENSSMAG00000005096	rtcb	100	91.287	ENSTGUG00000010947	RTCB	99	91.287	Taeniopygia_guttata
ENSSMAG00000005096	rtcb	91	93.913	ENSTRUG00000009880	rtcb	100	93.913	Takifugu_rubripes
ENSSMAG00000005096	rtcb	100	92.277	ENSTNIG00000002484	rtcb	100	92.277	Tetraodon_nigroviridis
ENSSMAG00000005096	rtcb	100	78.020	ENSTBEG00000004418	RTCB	94	87.097	Tupaia_belangeri
ENSSMAG00000005096	rtcb	93	89.362	ENSTTRG00000006417	RTCB	100	91.277	Tursiops_truncatus
ENSSMAG00000005096	rtcb	100	90.891	ENSUAMG00000022792	RTCB	100	90.891	Ursus_americanus
ENSSMAG00000005096	rtcb	100	90.891	ENSUMAG00000017225	RTCB	100	90.891	Ursus_maritimus
ENSSMAG00000005096	rtcb	100	90.495	ENSVPAG00000005375	RTCB	100	90.495	Vicugna_pacos
ENSSMAG00000005096	rtcb	100	90.891	ENSVVUG00000023408	RTCB	100	93.366	Vulpes_vulpes
ENSSMAG00000005096	rtcb	100	90.891	ENSXETG00000011523	rtcb	100	90.891	Xenopus_tropicalis
ENSSMAG00000005096	rtcb	100	92.871	ENSXMAG00000002855	rtcb	100	92.871	Xiphophorus_maculatus