EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000005195 (Gene tree)
Gene ID: -
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N(6)-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6887 bases
Position: chr1:15913411-15920297
Accession: ZDB-GENE-070410-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008420	Sua5_yciO_yrdC	PF01300.18	2.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008524	-	4547	-	ENSSMAP00000008420	263 (aa)	-	A0A2U9AX51

Gene Model

Click here to download ENSSMAG00000005195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005195	yrdc	79	62.736	ENSG00000196449	YRDC	75	62.736	Homo_sapiens
ENSSMAG00000005195	yrdc	98	84.170	ENSAPOG00000024293	yrdc	90	88.136	Acanthochromis_polyacanthus
ENSSMAG00000005195	yrdc	68	65.574	ENSAMEG00000001173	YRDC	97	65.574	Ailuropoda_melanoleuca
ENSSMAG00000005195	yrdc	97	83.071	ENSACIG00000017330	yrdc	88	85.593	Amphilophus_citrinellus
ENSSMAG00000005195	yrdc	98	84.170	ENSAOCG00000021647	yrdc	90	88.136	Amphiprion_ocellaris
ENSSMAG00000005195	yrdc	98	83.784	ENSAPEG00000006164	yrdc	90	87.712	Amphiprion_percula
ENSSMAG00000005195	yrdc	97	81.641	ENSATEG00000010086	yrdc	88	85.837	Anabas_testudineus
ENSSMAG00000005195	yrdc	72	63.402	ENSACAG00000017203	YRDC	94	63.317	Anolis_carolinensis
ENSSMAG00000005195	yrdc	82	59.361	ENSANAG00000028788	-	93	59.361	Aotus_nancymaae
ENSSMAG00000005195	yrdc	76	58.738	ENSANAG00000031052	-	75	58.738	Aotus_nancymaae
ENSSMAG00000005195	yrdc	95	86.400	ENSACLG00000027775	yrdc	88	88.559	Astatotilapia_calliptera
ENSSMAG00000005195	yrdc	89	72.222	ENSAMXG00000037791	yrdc	89	72.222	Astyanax_mexicanus
ENSSMAG00000005195	yrdc	94	56.349	ENSBTAG00000006510	YRDC	86	57.983	Bos_taurus
ENSSMAG00000005195	yrdc	78	36.697	WBGene00012997	Y48C3A.18	98	37.815	Caenorhabditis_elegans
ENSSMAG00000005195	yrdc	79	61.792	ENSCJAG00000002078	YRDC	58	61.792	Callithrix_jacchus
ENSSMAG00000005195	yrdc	79	61.321	ENSCAFG00000003253	YRDC	76	61.321	Canis_familiaris
ENSSMAG00000005195	yrdc	79	62.264	ENSCAFG00020007843	YRDC	76	62.264	Canis_lupus_dingo
ENSSMAG00000005195	yrdc	93	55.682	ENSCHIG00000007882	YRDC	74	64.216	Capra_hircus
ENSSMAG00000005195	yrdc	63	65.882	ENSTSYG00000005555	YRDC	61	65.882	Carlito_syrichta
ENSSMAG00000005195	yrdc	94	56.349	ENSCPOG00000036144	YRDC	75	63.679	Cavia_porcellus
ENSSMAG00000005195	yrdc	79	61.792	ENSCCAG00000028891	YRDC	75	61.792	Cebus_capucinus
ENSSMAG00000005195	yrdc	79	60.849	ENSCATG00000036928	YRDC	75	61.792	Cercocebus_atys
ENSSMAG00000005195	yrdc	70	65.957	ENSCLAG00000015012	YRDC	73	62.981	Chinchilla_lanigera
ENSSMAG00000005195	yrdc	79	60.849	ENSCSAG00000001116	YRDC	75	61.792	Chlorocebus_sabaeus
ENSSMAG00000005195	yrdc	73	49.289	ENSCHOG00000005500	YRDC	69	61.486	Choloepus_hoffmanni
ENSSMAG00000005195	yrdc	83	61.883	ENSCPBG00000018446	YRDC	95	61.883	Chrysemys_picta_bellii
ENSSMAG00000005195	yrdc	76	49.765	ENSCING00000007564	-	98	49.765	Ciona_intestinalis
ENSSMAG00000005195	yrdc	76	48.341	ENSCSAVG00000009982	-	98	48.341	Ciona_savignyi
ENSSMAG00000005195	yrdc	79	61.792	ENSCANG00000031111	YRDC	75	62.736	Colobus_angolensis_palliatus
ENSSMAG00000005195	yrdc	94	55.952	ENSCGRG00001014496	-	75	62.736	Cricetulus_griseus_chok1gshd
ENSSMAG00000005195	yrdc	85	53.947	ENSCGRG00001000829	-	63	53.478	Cricetulus_griseus_chok1gshd
ENSSMAG00000005195	yrdc	83	79.263	ENSCSEG00000019075	yrdc	80	79.263	Cynoglossus_semilaevis
ENSSMAG00000005195	yrdc	98	75.486	ENSCVAG00000017355	yrdc	89	77.966	Cyprinodon_variegatus
ENSSMAG00000005195	yrdc	90	72.034	ENSDARG00000041428	yrdc	99	72.034	Danio_rerio
ENSSMAG00000005195	yrdc	98	53.208	ENSDNOG00000038789	-	75	61.792	Dasypus_novemcinctus
ENSSMAG00000005195	yrdc	71	47.938	ENSDNOG00000036198	-	94	47.938	Dasypus_novemcinctus
ENSSMAG00000005195	yrdc	70	65.608	ENSDORG00000008788	Yrdc	84	65.608	Dipodomys_ordii
ENSSMAG00000005195	yrdc	72	49.744	FBgn0061361	CG33786	78	49.744	Drosophila_melanogaster
ENSSMAG00000005195	yrdc	96	42.909	ENSETEG00000003442	YRDC	86	45.082	Echinops_telfairi
ENSSMAG00000005195	yrdc	89	48.548	ENSEBUG00000014080	yrdc	99	48.548	Eptatretus_burgeri
ENSSMAG00000005195	yrdc	94	56.522	ENSEASG00005012253	YRDC	73	63.902	Equus_asinus_asinus
ENSSMAG00000005195	yrdc	94	55.952	ENSECAG00000022522	YRDC	73	63.902	Equus_caballus
ENSSMAG00000005195	yrdc	90	76.763	ENSELUG00000018071	yrdc	80	76.763	Esox_lucius
ENSSMAG00000005195	yrdc	94	54.365	ENSFCAG00000011018	YRDC	75	61.321	Felis_catus
ENSSMAG00000005195	yrdc	72	68.912	ENSFALG00000000964	YRDC	90	68.020	Ficedula_albicollis
ENSSMAG00000005195	yrdc	70	30.612	ENSFALG00000011333	-	51	30.612	Ficedula_albicollis
ENSSMAG00000005195	yrdc	96	77.866	ENSFHEG00000001029	yrdc	87	79.167	Fundulus_heteroclitus
ENSSMAG00000005195	yrdc	78	77.561	ENSGMOG00000015635	yrdc	99	77.561	Gadus_morhua
ENSSMAG00000005195	yrdc	74	30.288	ENSGALG00000025899	-	69	30.288	Gallus_gallus
ENSSMAG00000005195	yrdc	96	57.692	ENSGALG00000029001	YRDC	82	66.346	Gallus_gallus
ENSSMAG00000005195	yrdc	97	77.734	ENSGAFG00000008396	yrdc	89	79.412	Gambusia_affinis
ENSSMAG00000005195	yrdc	89	81.435	ENSGACG00000013878	yrdc	98	81.435	Gasterosteus_aculeatus
ENSSMAG00000005195	yrdc	77	66.667	ENSGAGG00000014968	YRDC	90	66.667	Gopherus_agassizii
ENSSMAG00000005195	yrdc	79	62.736	ENSGGOG00000007619	YRDC	75	62.736	Gorilla_gorilla
ENSSMAG00000005195	yrdc	95	85.600	ENSHBUG00000009298	yrdc	88	87.288	Haplochromis_burtoni
ENSSMAG00000005195	yrdc	94	55.556	ENSHGLG00000014075	YRDC	75	62.736	Heterocephalus_glaber_female
ENSSMAG00000005195	yrdc	73	65.641	ENSHGLG00100002734	YRDC	70	65.641	Heterocephalus_glaber_male
ENSSMAG00000005195	yrdc	89	71.064	ENSHCOG00000006598	yrdc	92	71.064	Hippocampus_comes
ENSSMAG00000005195	yrdc	89	77.021	ENSIPUG00000014985	yrdc	97	77.021	Ictalurus_punctatus
ENSSMAG00000005195	yrdc	94	56.641	ENSSTOG00000001643	YRDC	75	63.679	Ictidomys_tridecemlineatus
ENSSMAG00000005195	yrdc	95	81.600	ENSKMAG00000013468	yrdc	88	82.979	Kryptolebias_marmoratus
ENSSMAG00000005195	yrdc	98	83.333	ENSLBEG00000027501	yrdc	88	86.809	Labrus_bergylta
ENSSMAG00000005195	yrdc	78	65.865	ENSLACG00000010689	YRDC	94	66.667	Latimeria_chalumnae
ENSSMAG00000005195	yrdc	81	31.278	ENSLACG00000017624	si:ch211-153b23.3	68	31.278	Latimeria_chalumnae
ENSSMAG00000005195	yrdc	88	66.949	ENSLOCG00000003321	yrdc	97	66.949	Lepisosteus_oculatus
ENSSMAG00000005195	yrdc	94	55.159	ENSLAFG00000017556	YRDC	73	63.235	Loxodonta_africana
ENSSMAG00000005195	yrdc	76	61.765	ENSMFAG00000003487	YRDC	96	62.745	Macaca_fascicularis
ENSSMAG00000005195	yrdc	79	60.849	ENSMMUG00000005372	YRDC	56	61.792	Macaca_mulatta
ENSSMAG00000005195	yrdc	79	60.849	ENSMNEG00000029348	YRDC	75	61.792	Macaca_nemestrina
ENSSMAG00000005195	yrdc	53	65.734	ENSMLEG00000041122	YRDC	95	67.133	Mandrillus_leucophaeus
ENSSMAG00000005195	yrdc	98	79.615	ENSMAMG00000007315	yrdc	90	81.667	Mastacembelus_armatus
ENSSMAG00000005195	yrdc	95	86.400	ENSMZEG00005006948	yrdc	88	88.559	Maylandia_zebra
ENSSMAG00000005195	yrdc	75	68.500	ENSMGAG00000002833	YRDC	98	68.500	Meleagris_gallopavo
ENSSMAG00000005195	yrdc	70	31.122	ENSMGAG00000005489	-	51	31.122	Meleagris_gallopavo
ENSSMAG00000005195	yrdc	79	64.623	ENSMICG00000031688	YRDC	75	64.623	Microcebus_murinus
ENSSMAG00000005195	yrdc	71	51.596	ENSMOCG00000000164	-	56	60.135	Microtus_ochrogaster
ENSSMAG00000005195	yrdc	98	82.879	ENSMMOG00000002119	yrdc	96	82.879	Mola_mola
ENSSMAG00000005195	yrdc	78	62.381	ENSMODG00000017750	YRDC	75	62.381	Monodelphis_domestica
ENSSMAG00000005195	yrdc	98	80.769	ENSMALG00000012471	yrdc	98	80.769	Monopterus_albus
ENSSMAG00000005195	yrdc	73	63.265	MGP_CAROLIEiJ_G0026453	Yrdc	98	70.874	Mus_caroli
ENSSMAG00000005195	yrdc	79	62.736	ENSMUSG00000028889	Yrdc	100	71.429	Mus_musculus
ENSSMAG00000005195	yrdc	86	59.825	MGP_PahariEiJ_G0028784	Yrdc	100	71.429	Mus_pahari
ENSSMAG00000005195	yrdc	79	62.736	MGP_SPRETEiJ_G0027432	Yrdc	75	62.736	Mus_spretus
ENSSMAG00000005195	yrdc	73	64.615	ENSMPUG00000014542	YRDC	78	64.615	Mustela_putorius_furo
ENSSMAG00000005195	yrdc	76	54.412	ENSMLUG00000028796	-	73	54.412	Myotis_lucifugus
ENSSMAG00000005195	yrdc	74	61.111	ENSMLUG00000024310	-	97	61.111	Myotis_lucifugus
ENSSMAG00000005195	yrdc	79	63.679	ENSMLUG00000000955	-	75	63.679	Myotis_lucifugus
ENSSMAG00000005195	yrdc	76	63.415	ENSNGAG00000019099	Yrdc	73	63.415	Nannospalax_galili
ENSSMAG00000005195	yrdc	95	86.000	ENSNBRG00000009475	yrdc	89	87.712	Neolamprologus_brichardi
ENSSMAG00000005195	yrdc	79	62.736	ENSNLEG00000011665	YRDC	75	62.736	Nomascus_leucogenys
ENSSMAG00000005195	yrdc	79	62.559	ENSMEUG00000005068	YRDC	98	62.857	Notamacropus_eugenii
ENSSMAG00000005195	yrdc	94	57.087	ENSODEG00000007401	YRDC	100	70.476	Octodon_degus
ENSSMAG00000005195	yrdc	89	88.085	ENSONIG00000016213	yrdc	99	88.085	Oreochromis_niloticus
ENSSMAG00000005195	yrdc	79	63.380	ENSOCUG00000005384	YRDC	72	63.380	Oryctolagus_cuniculus
ENSSMAG00000005195	yrdc	97	76.654	ENSORLG00000014393	yrdc	90	79.412	Oryzias_latipes
ENSSMAG00000005195	yrdc	97	77.647	ENSORLG00020019663	yrdc	90	80.508	Oryzias_latipes_hni
ENSSMAG00000005195	yrdc	97	76.471	ENSORLG00015004625	yrdc	90	79.661	Oryzias_latipes_hsok
ENSSMAG00000005195	yrdc	99	78.462	ENSOMEG00000018550	yrdc	90	82.553	Oryzias_melastigma
ENSSMAG00000005195	yrdc	93	54.717	ENSOGAG00000030474	YRDC	83	58.952	Otolemur_garnettii
ENSSMAG00000005195	yrdc	76	64.216	ENSOARG00000019873	YRDC	73	64.216	Ovis_aries
ENSSMAG00000005195	yrdc	52	68.794	ENSPPAG00000039722	-	95	68.794	Pan_paniscus
ENSSMAG00000005195	yrdc	94	54.365	ENSPPRG00000007752	YRDC	75	61.321	Panthera_pardus
ENSSMAG00000005195	yrdc	85	49.351	ENSPTIG00000019821	YRDC	96	49.351	Panthera_tigris_altaica
ENSSMAG00000005195	yrdc	79	62.736	ENSPTRG00000000557	YRDC	75	62.736	Pan_troglodytes
ENSSMAG00000005195	yrdc	79	60.849	ENSPANG00000006487	YRDC	56	61.792	Papio_anubis
ENSSMAG00000005195	yrdc	88	72.222	ENSPKIG00000004574	yrdc	85	72.222	Paramormyrops_kingsleyae
ENSSMAG00000005195	yrdc	77	63.285	ENSPSIG00000006483	YRDC	73	63.285	Pelodiscus_sinensis
ENSSMAG00000005195	yrdc	98	76.357	ENSPMGG00000004184	yrdc	92	80.508	Periophthalmus_magnuspinnatus
ENSSMAG00000005195	yrdc	64	64.535	ENSPEMG00000016985	Yrdc	75	64.535	Peromyscus_maniculatus_bairdii
ENSSMAG00000005195	yrdc	68	57.377	ENSPMAG00000002905	yrdc	99	57.377	Petromyzon_marinus
ENSSMAG00000005195	yrdc	78	61.429	ENSPCIG00000025731	YRDC	75	61.429	Phascolarctos_cinereus
ENSSMAG00000005195	yrdc	97	77.734	ENSPFOG00000023097	yrdc	89	79.412	Poecilia_formosa
ENSSMAG00000005195	yrdc	97	77.344	ENSPLAG00000020882	yrdc	89	78.992	Poecilia_latipinna
ENSSMAG00000005195	yrdc	97	78.039	ENSPMEG00000013237	yrdc	89	79.747	Poecilia_mexicana
ENSSMAG00000005195	yrdc	97	77.734	ENSPREG00000005285	yrdc	89	79.412	Poecilia_reticulata
ENSSMAG00000005195	yrdc	76	63.725	ENSPPYG00000001523	-	86	62.736	Pongo_abelii
ENSSMAG00000005195	yrdc	87	58.369	ENSPCAG00000016850	YRDC	81	58.952	Procavia_capensis
ENSSMAG00000005195	yrdc	79	64.151	ENSPCOG00000013214	YRDC	75	64.151	Propithecus_coquereli
ENSSMAG00000005195	yrdc	92	56.226	ENSPVAG00000010147	YRDC	73	64.216	Pteropus_vampyrus
ENSSMAG00000005195	yrdc	95	86.000	ENSPNYG00000013956	yrdc	88	87.712	Pundamilia_nyererei
ENSSMAG00000005195	yrdc	82	75.349	ENSPNAG00000015625	yrdc	89	75.349	Pygocentrus_nattereri
ENSSMAG00000005195	yrdc	94	55.556	ENSRNOG00000025424	Yrdc	75	62.264	Rattus_norvegicus
ENSSMAG00000005195	yrdc	98	53.640	ENSRBIG00000032289	YRDC	75	62.264	Rhinopithecus_bieti
ENSSMAG00000005195	yrdc	83	57.895	ENSRROG00000039370	YRDC	78	58.772	Rhinopithecus_roxellana
ENSSMAG00000005195	yrdc	75	62.687	ENSSBOG00000018937	YRDC	85	63.317	Saimiri_boliviensis_boliviensis
ENSSMAG00000005195	yrdc	53	66.667	ENSSHAG00000013957	-	97	66.667	Sarcophilus_harrisii
ENSSMAG00000005195	yrdc	79	72.381	ENSSFOG00015006128	yrdc	90	72.381	Scleropages_formosus
ENSSMAG00000005195	yrdc	54	34.667	ENSSDUG00000006736	-	77	34.667	Seriola_dumerili
ENSSMAG00000005195	yrdc	100	85.714	ENSSDUG00000009775	yrdc	89	88.655	Seriola_dumerili
ENSSMAG00000005195	yrdc	51	34.028	ENSSDUG00000006631	-	68	33.333	Seriola_dumerili
ENSSMAG00000005195	yrdc	100	86.090	ENSSLDG00000003196	yrdc	89	88.655	Seriola_lalandi_dorsalis
ENSSMAG00000005195	yrdc	51	33.333	ENSSLDG00000008694	-	68	33.333	Seriola_lalandi_dorsalis
ENSSMAG00000005195	yrdc	81	64.055	ENSSPUG00000003946	YRDC	84	64.055	Sphenodon_punctatus
ENSSMAG00000005195	yrdc	98	83.398	ENSSPAG00000012559	yrdc	89	86.017	Stegastes_partitus
ENSSMAG00000005195	yrdc	94	55.952	ENSSSCG00000040425	YRDC	75	63.208	Sus_scrofa
ENSSMAG00000005195	yrdc	54	70.548	ENSTGUG00000001507	YRDC	99	70.548	Taeniopygia_guttata
ENSSMAG00000005195	yrdc	95	73.333	ENSTRUG00000005923	yrdc	90	74.486	Takifugu_rubripes
ENSSMAG00000005195	yrdc	57	64.286	ENSTBEG00000008863	YRDC	98	64.286	Tupaia_belangeri
ENSSMAG00000005195	yrdc	52	68.794	ENSTTRG00000013538	-	95	68.794	Tursiops_truncatus
ENSSMAG00000005195	yrdc	73	66.154	ENSUAMG00000006150	YRDC	96	66.154	Ursus_americanus
ENSSMAG00000005195	yrdc	80	49.767	ENSVPAG00000006642	YRDC	90	49.767	Vicugna_pacos
ENSSMAG00000005195	yrdc	88	61.826	ENSXETG00000014420	yrdc	99	61.826	Xenopus_tropicalis
ENSSMAG00000005195	yrdc	90	79.747	ENSXCOG00000000829	yrdc	99	79.747	Xiphophorus_couchianus
ENSSMAG00000005195	yrdc	97	78.125	ENSXMAG00000014606	yrdc	84	79.832	Xiphophorus_maculatus