EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000005308 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6842 bases
Position: chr10:15257135-15263976
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008690	PRP4	PF08799.11	6.9e-12	1	1
ENSSMAP00000008678	PRP4	PF08799.11	7.1e-12	1	1
ENSSMAP00000008690	Prp18	PF02840.15	2.5e-62	1	1
ENSSMAP00000008678	Prp18	PF02840.15	2.6e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008784	-	2052	-	ENSSMAP00000008678	350 (aa)	-	-
ENSSMAT00000008796	-	2025	-	ENSSMAP00000008690	341 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005308	prpf18	100	83.333	ENSG00000165630	PRPF18	100	83.333	Homo_sapiens
ENSSMAG00000005308	prpf18	100	92.857	ENSAPOG00000024177	prpf18	100	92.857	Acanthochromis_polyacanthus
ENSSMAG00000005308	prpf18	100	82.749	ENSAMEG00000013591	-	100	82.749	Ailuropoda_melanoleuca
ENSSMAG00000005308	prpf18	100	91.496	ENSACIG00000001186	prpf18	100	91.496	Amphilophus_citrinellus
ENSSMAG00000005308	prpf18	98	92.216	ENSAOCG00000006572	prpf18	94	92.105	Amphiprion_ocellaris
ENSSMAG00000005308	prpf18	100	92.375	ENSAPEG00000004564	prpf18	100	92.375	Amphiprion_percula
ENSSMAG00000005308	prpf18	100	92.669	ENSATEG00000000303	prpf18	100	92.669	Anabas_testudineus
ENSSMAG00000005308	prpf18	99	80.882	ENSAPLG00000003387	-	99	80.882	Anas_platyrhynchos
ENSSMAG00000005308	prpf18	100	82.267	ENSACAG00000000818	-	100	82.267	Anolis_carolinensis
ENSSMAG00000005308	prpf18	100	83.041	ENSANAG00000037445	-	100	83.041	Aotus_nancymaae
ENSSMAG00000005308	prpf18	100	90.616	ENSACLG00000026296	prpf18	100	90.616	Astatotilapia_calliptera
ENSSMAG00000005308	prpf18	100	86.857	ENSAMXG00000012848	prpf18	100	86.857	Astyanax_mexicanus
ENSSMAG00000005308	prpf18	100	82.456	ENSBTAG00000017244	PRPF18	100	82.456	Bos_taurus
ENSSMAG00000005308	prpf18	98	38.617	WBGene00009320	F32B6.3	97	38.617	Caenorhabditis_elegans
ENSSMAG00000005308	prpf18	100	83.041	ENSCJAG00000009432	-	100	83.041	Callithrix_jacchus
ENSSMAG00000005308	prpf18	100	82.749	ENSCAFG00000004735	-	100	82.749	Canis_familiaris
ENSSMAG00000005308	prpf18	100	82.749	ENSCAFG00020007712	-	100	82.749	Canis_lupus_dingo
ENSSMAG00000005308	prpf18	100	82.456	ENSCHIG00000000499	-	100	82.456	Capra_hircus
ENSSMAG00000005308	prpf18	100	82.749	ENSTSYG00000003517	-	100	82.749	Carlito_syrichta
ENSSMAG00000005308	prpf18	100	83.333	ENSCPOG00000021069	-	100	83.333	Cavia_porcellus
ENSSMAG00000005308	prpf18	100	83.041	ENSCCAG00000036822	-	100	83.041	Cebus_capucinus
ENSSMAG00000005308	prpf18	100	73.099	ENSCATG00000016633	-	100	73.099	Cercocebus_atys
ENSSMAG00000005308	prpf18	100	82.749	ENSCLAG00000011770	-	100	82.749	Chinchilla_lanigera
ENSSMAG00000005308	prpf18	100	81.766	ENSCSAG00000013109	-	100	81.766	Chlorocebus_sabaeus
ENSSMAG00000005308	prpf18	100	78.090	ENSCPBG00000003100	-	100	78.933	Chrysemys_picta_bellii
ENSSMAG00000005308	prpf18	99	55.685	ENSCING00000020481	-	97	55.685	Ciona_intestinalis
ENSSMAG00000005308	prpf18	99	54.493	ENSCSAVG00000010546	-	99	54.493	Ciona_savignyi
ENSSMAG00000005308	prpf18	100	83.333	ENSCANG00000034900	-	100	83.333	Colobus_angolensis_palliatus
ENSSMAG00000005308	prpf18	100	82.749	ENSCGRG00001023665	Prpf18	100	82.749	Cricetulus_griseus_chok1gshd
ENSSMAG00000005308	prpf18	100	82.749	ENSCGRG00000014690	Prpf18	100	82.749	Cricetulus_griseus_crigri
ENSSMAG00000005308	prpf18	100	90.029	ENSCSEG00000005536	prpf18	99	90.029	Cynoglossus_semilaevis
ENSSMAG00000005308	prpf18	100	90.323	ENSCVAG00000012401	prpf18	100	90.323	Cyprinodon_variegatus
ENSSMAG00000005308	prpf18	100	86.842	ENSDARG00000058306	prpf18	100	86.842	Danio_rerio
ENSSMAG00000005308	prpf18	100	83.041	ENSDNOG00000035607	-	100	83.041	Dasypus_novemcinctus
ENSSMAG00000005308	prpf18	100	82.456	ENSDORG00000000858	Prpf18	100	82.456	Dipodomys_ordii
ENSSMAG00000005308	prpf18	99	51.183	FBgn0027784	Prp18	98	51.183	Drosophila_melanogaster
ENSSMAG00000005308	prpf18	100	74.269	ENSETEG00000015060	-	100	74.269	Echinops_telfairi
ENSSMAG00000005308	prpf18	100	68.876	ENSEBUG00000016502	prpf18	99	68.876	Eptatretus_burgeri
ENSSMAG00000005308	prpf18	100	83.041	ENSEASG00005019373	-	100	83.041	Equus_asinus_asinus
ENSSMAG00000005308	prpf18	100	83.041	ENSECAG00000006997	PRPF18	100	83.041	Equus_caballus
ENSSMAG00000005308	prpf18	92	50.949	ENSEEUG00000001171	-	100	50.949	Erinaceus_europaeus
ENSSMAG00000005308	prpf18	100	88.630	ENSELUG00000022190	prpf18	100	88.630	Esox_lucius
ENSSMAG00000005308	prpf18	100	83.041	ENSFCAG00000004436	-	100	83.041	Felis_catus
ENSSMAG00000005308	prpf18	93	78.154	ENSFALG00000001912	-	97	78.462	Ficedula_albicollis
ENSSMAG00000005308	prpf18	99	55.362	ENSFDAG00000010713	-	97	55.362	Fukomys_damarensis
ENSSMAG00000005308	prpf18	94	85.000	ENSFDAG00000014026	-	100	85.000	Fukomys_damarensis
ENSSMAG00000005308	prpf18	80	93.750	ENSFHEG00000020125	prpf18	99	93.750	Fundulus_heteroclitus
ENSSMAG00000005308	prpf18	99	85.882	ENSGMOG00000012210	prpf18	99	85.882	Gadus_morhua
ENSSMAG00000005308	prpf18	100	81.871	ENSGALG00000043593	-	100	81.871	Gallus_gallus
ENSSMAG00000005308	prpf18	100	90.616	ENSGAFG00000006034	prpf18	100	90.616	Gambusia_affinis
ENSSMAG00000005308	prpf18	100	92.082	ENSGACG00000012232	prpf18	100	92.082	Gasterosteus_aculeatus
ENSSMAG00000005308	prpf18	100	81.579	ENSGAGG00000016878	-	100	81.579	Gopherus_agassizii
ENSSMAG00000005308	prpf18	92	82.595	ENSGGOG00000025188	-	96	82.595	Gorilla_gorilla
ENSSMAG00000005308	prpf18	100	90.857	ENSHBUG00000010264	prpf18	100	90.857	Haplochromis_burtoni
ENSSMAG00000005308	prpf18	100	82.749	ENSHGLG00000018534	PRPF18	100	82.749	Heterocephalus_glaber_female
ENSSMAG00000005308	prpf18	94	84.688	ENSHGLG00100012161	-	98	84.688	Heterocephalus_glaber_male
ENSSMAG00000005308	prpf18	100	92.669	ENSHCOG00000015987	prpf18	100	92.669	Hippocampus_comes
ENSSMAG00000005308	prpf18	100	80.453	ENSIPUG00000007432	prpf18	100	81.020	Ictalurus_punctatus
ENSSMAG00000005308	prpf18	100	82.456	ENSSTOG00000008735	-	100	82.456	Ictidomys_tridecemlineatus
ENSSMAG00000005308	prpf18	100	83.333	ENSJJAG00000024041	-	100	83.333	Jaculus_jaculus
ENSSMAG00000005308	prpf18	100	62.099	ENSJJAG00000015191	-	100	62.099	Jaculus_jaculus
ENSSMAG00000005308	prpf18	100	90.323	ENSKMAG00000012124	prpf18	100	90.323	Kryptolebias_marmoratus
ENSSMAG00000005308	prpf18	96	90.798	ENSLBEG00000028466	prpf18	98	89.458	Labrus_bergylta
ENSSMAG00000005308	prpf18	100	81.579	ENSLACG00000009885	prpf18	100	82.456	Latimeria_chalumnae
ENSSMAG00000005308	prpf18	100	85.673	ENSLOCG00000016736	prpf18	100	85.673	Lepisosteus_oculatus
ENSSMAG00000005308	prpf18	100	83.333	ENSLAFG00000007753	-	100	83.333	Loxodonta_africana
ENSSMAG00000005308	prpf18	100	83.333	ENSMFAG00000000540	-	100	83.333	Macaca_fascicularis
ENSSMAG00000005308	prpf18	100	83.333	ENSMMUG00000015071	PRPF18	93	91.391	Macaca_mulatta
ENSSMAG00000005308	prpf18	100	83.333	ENSMNEG00000024679	-	100	83.333	Macaca_nemestrina
ENSSMAG00000005308	prpf18	100	68.129	ENSMLEG00000031715	-	100	68.129	Mandrillus_leucophaeus
ENSSMAG00000005308	prpf18	100	92.286	ENSMAMG00000006610	prpf18	100	92.286	Mastacembelus_armatus
ENSSMAG00000005308	prpf18	100	90.857	ENSMZEG00005019392	prpf18	100	90.857	Maylandia_zebra
ENSSMAG00000005308	prpf18	100	81.871	ENSMGAG00000005023	-	100	81.871	Meleagris_gallopavo
ENSSMAG00000005308	prpf18	100	83.626	ENSMICG00000006572	-	100	83.626	Microcebus_murinus
ENSSMAG00000005308	prpf18	100	83.333	ENSMOCG00000021468	Prpf18	100	83.333	Microtus_ochrogaster
ENSSMAG00000005308	prpf18	100	91.202	ENSMMOG00000013012	prpf18	100	91.202	Mola_mola
ENSSMAG00000005308	prpf18	97	78.171	ENSMODG00000016902	-	92	78.171	Monodelphis_domestica
ENSSMAG00000005308	prpf18	100	76.608	ENSMODG00000024043	-	100	76.608	Monodelphis_domestica
ENSSMAG00000005308	prpf18	100	83.478	ENSMALG00000005486	prpf18	100	83.478	Monopterus_albus
ENSSMAG00000005308	prpf18	100	82.749	MGP_CAROLIEiJ_G0023143	Prpf18	100	93.151	Mus_caroli
ENSSMAG00000005308	prpf18	100	82.749	ENSMUSG00000039449	Prpf18	100	93.151	Mus_musculus
ENSSMAG00000005308	prpf18	100	83.041	MGP_PahariEiJ_G0019203	Prpf18	100	93.151	Mus_pahari
ENSSMAG00000005308	prpf18	100	82.456	MGP_SPRETEiJ_G0024061	Prpf18	100	93.151	Mus_spretus
ENSSMAG00000005308	prpf18	100	82.456	ENSMPUG00000000938	-	100	82.456	Mustela_putorius_furo
ENSSMAG00000005308	prpf18	100	82.456	ENSMLUG00000009200	-	100	82.456	Myotis_lucifugus
ENSSMAG00000005308	prpf18	100	83.333	ENSNGAG00000012500	-	100	83.333	Nannospalax_galili
ENSSMAG00000005308	prpf18	68	81.466	ENSNGAG00000023550	-	83	81.466	Nannospalax_galili
ENSSMAG00000005308	prpf18	100	90.909	ENSNBRG00000001778	prpf18	100	90.909	Neolamprologus_brichardi
ENSSMAG00000005308	prpf18	100	83.333	ENSNLEG00000012186	-	100	83.333	Nomascus_leucogenys
ENSSMAG00000005308	prpf18	76	72.201	ENSMEUG00000005032	-	75	72.201	Notamacropus_eugenii
ENSSMAG00000005308	prpf18	77	64.528	ENSOPRG00000002153	-	100	64.528	Ochotona_princeps
ENSSMAG00000005308	prpf18	100	83.041	ENSODEG00000003770	-	100	83.041	Octodon_degus
ENSSMAG00000005308	prpf18	98	90.419	ENSONIG00000014854	prpf18	96	90.419	Oreochromis_niloticus
ENSSMAG00000005308	prpf18	100	83.041	ENSOANG00000015404	-	100	83.041	Ornithorhynchus_anatinus
ENSSMAG00000005308	prpf18	100	83.041	ENSOCUG00000027756	-	96	84.098	Oryctolagus_cuniculus
ENSSMAG00000005308	prpf18	100	90.571	ENSORLG00000010293	prpf18	100	90.571	Oryzias_latipes
ENSSMAG00000005308	prpf18	100	90.616	ENSORLG00020001530	prpf18	100	90.616	Oryzias_latipes_hni
ENSSMAG00000005308	prpf18	100	90.323	ENSORLG00015013705	prpf18	100	90.323	Oryzias_latipes_hsok
ENSSMAG00000005308	prpf18	100	90.909	ENSOMEG00000009167	prpf18	100	90.909	Oryzias_melastigma
ENSSMAG00000005308	prpf18	100	82.164	ENSOGAG00000007294	-	100	82.164	Otolemur_garnettii
ENSSMAG00000005308	prpf18	100	80.912	ENSOARG00000006243	-	100	80.912	Ovis_aries
ENSSMAG00000005308	prpf18	100	83.333	ENSPPAG00000041959	-	100	83.333	Pan_paniscus
ENSSMAG00000005308	prpf18	100	83.041	ENSPPRG00000000107	-	100	83.041	Panthera_pardus
ENSSMAG00000005308	prpf18	100	83.041	ENSPTIG00000021094	-	100	83.041	Panthera_tigris_altaica
ENSSMAG00000005308	prpf18	100	83.333	ENSPTRG00000002306	PRPF18	100	83.333	Pan_troglodytes
ENSSMAG00000005308	prpf18	100	83.041	ENSPANG00000023346	-	100	83.041	Papio_anubis
ENSSMAG00000005308	prpf18	100	84.615	ENSPKIG00000014128	prpf18	96	84.615	Paramormyrops_kingsleyae
ENSSMAG00000005308	prpf18	100	81.579	ENSPSIG00000016064	-	100	81.579	Pelodiscus_sinensis
ENSSMAG00000005308	prpf18	100	85.088	ENSPMGG00000016486	prpf18	100	85.088	Periophthalmus_magnuspinnatus
ENSSMAG00000005308	prpf18	100	83.041	ENSPEMG00000013704	Prpf18	100	83.041	Peromyscus_maniculatus_bairdii
ENSSMAG00000005308	prpf18	100	72.622	ENSPMAG00000000204	prpf18	100	72.622	Petromyzon_marinus
ENSSMAG00000005308	prpf18	92	82.278	ENSPCIG00000012963	-	99	82.278	Phascolarctos_cinereus
ENSSMAG00000005308	prpf18	100	89.429	ENSPFOG00000017611	prpf18	100	89.429	Poecilia_formosa
ENSSMAG00000005308	prpf18	100	89.736	ENSPLAG00000000369	prpf18	100	89.736	Poecilia_latipinna
ENSSMAG00000005308	prpf18	100	90.029	ENSPMEG00000005183	prpf18	100	90.029	Poecilia_mexicana
ENSSMAG00000005308	prpf18	100	89.150	ENSPREG00000015232	prpf18	100	89.150	Poecilia_reticulata
ENSSMAG00000005308	prpf18	100	83.041	ENSPPYG00000002101	PRPF18	100	83.041	Pongo_abelii
ENSSMAG00000005308	prpf18	100	65.497	ENSPCAG00000010833	-	100	65.497	Procavia_capensis
ENSSMAG00000005308	prpf18	100	78.070	ENSPCOG00000013057	-	100	78.070	Propithecus_coquereli
ENSSMAG00000005308	prpf18	100	50.585	ENSPVAG00000002947	-	100	50.585	Pteropus_vampyrus
ENSSMAG00000005308	prpf18	100	91.143	ENSPNYG00000003554	prpf18	100	91.143	Pundamilia_nyererei
ENSSMAG00000005308	prpf18	100	86.325	ENSPNAG00000023151	prpf18	100	86.325	Pygocentrus_nattereri
ENSSMAG00000005308	prpf18	100	83.041	ENSRNOG00000018396	Prpf18	100	83.041	Rattus_norvegicus
ENSSMAG00000005308	prpf18	100	83.626	ENSRBIG00000028028	-	100	83.626	Rhinopithecus_bieti
ENSSMAG00000005308	prpf18	100	83.333	ENSRROG00000040695	-	100	83.333	Rhinopithecus_roxellana
ENSSMAG00000005308	prpf18	100	83.041	ENSSBOG00000034482	-	100	83.041	Saimiri_boliviensis_boliviensis
ENSSMAG00000005308	prpf18	100	69.883	ENSSHAG00000009669	-	100	69.883	Sarcophilus_harrisii
ENSSMAG00000005308	prpf18	100	83.041	ENSSHAG00000016463	-	100	83.041	Sarcophilus_harrisii
ENSSMAG00000005308	prpf18	77	45.455	ENSSFOG00015021154	-	95	47.809	Scleropages_formosus
ENSSMAG00000005308	prpf18	98	84.058	ENSSFOG00015022118	prpf18	100	79.251	Scleropages_formosus
ENSSMAG00000005308	prpf18	100	94.286	ENSSDUG00000015428	prpf18	100	94.286	Seriola_dumerili
ENSSMAG00000005308	prpf18	100	94.286	ENSSLDG00000023989	prpf18	100	94.286	Seriola_lalandi_dorsalis
ENSSMAG00000005308	prpf18	100	54.386	ENSSARG00000005307	-	100	54.386	Sorex_araneus
ENSSMAG00000005308	prpf18	100	82.749	ENSSPUG00000002619	-	100	82.749	Sphenodon_punctatus
ENSSMAG00000005308	prpf18	100	93.714	ENSSPAG00000019502	prpf18	100	93.714	Stegastes_partitus
ENSSMAG00000005308	prpf18	100	82.749	ENSSSCG00000026354	-	100	82.749	Sus_scrofa
ENSSMAG00000005308	prpf18	100	80.994	ENSTGUG00000002286	-	100	80.994	Taeniopygia_guttata
ENSSMAG00000005308	prpf18	100	88.270	ENSTRUG00000011278	prpf18	100	88.270	Takifugu_rubripes
ENSSMAG00000005308	prpf18	100	88.856	ENSTNIG00000000911	prpf18	100	88.856	Tetraodon_nigroviridis
ENSSMAG00000005308	prpf18	80	97.436	ENSTBEG00000013011	-	79	97.436	Tupaia_belangeri
ENSSMAG00000005308	prpf18	100	83.626	ENSTTRG00000011117	PRPF18	100	83.626	Tursiops_truncatus
ENSSMAG00000005308	prpf18	91	85.209	ENSUAMG00000001815	-	93	85.209	Ursus_americanus
ENSSMAG00000005308	prpf18	100	78.070	ENSUMAG00000012329	-	100	78.070	Ursus_maritimus
ENSSMAG00000005308	prpf18	100	77.193	ENSVPAG00000011486	-	100	77.193	Vicugna_pacos
ENSSMAG00000005308	prpf18	100	82.749	ENSVVUG00000005453	-	100	82.749	Vulpes_vulpes
ENSSMAG00000005308	prpf18	100	74.783	ENSXETG00000024057	prpf18	100	74.783	Xenopus_tropicalis
ENSSMAG00000005308	prpf18	100	89.796	ENSXCOG00000020414	prpf18	100	89.796	Xiphophorus_couchianus
ENSSMAG00000005308	prpf18	100	90.323	ENSXMAG00000004713	prpf18	91	90.323	Xiphophorus_maculatus