EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000005354 (Gene tree)
Gene ID: -
Gene Symbol: polr2f
Alias: zgc:92790
Full Name: polymerase (RNA) II (DNA directed) polypeptide F
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 1999 bases
Position: chr19:6217329-6219327
Accession: ZDB-GENE-040718-279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008702	RNA_pol_Rpb6	PF01192.22	1.3e-15	1	1
ENSSMAP00000008715	RNA_pol_Rpb6	PF01192.22	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008809	-	526	-	ENSSMAP00000008702	127 (aa)	-	A0A2U9CRX2
ENSSMAT00000008823	-	390	-	ENSSMAP00000008715	129 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005354	polr2f	100	88.976	ENSG00000100142	POLR2F	100	88.976	Homo_sapiens
ENSSMAG00000005354	polr2f	100	98.425	ENSAPOG00000002902	polr2f	100	98.425	Acanthochromis_polyacanthus
ENSSMAG00000005354	polr2f	100	88.189	ENSAMEG00000010331	POLR2F	100	88.189	Ailuropoda_melanoleuca
ENSSMAG00000005354	polr2f	100	98.425	ENSACIG00000000923	polr2f	100	98.425	Amphilophus_citrinellus
ENSSMAG00000005354	polr2f	100	99.213	ENSAOCG00000003182	polr2f	100	99.213	Amphiprion_ocellaris
ENSSMAG00000005354	polr2f	100	99.213	ENSAPEG00000012999	polr2f	100	99.213	Amphiprion_percula
ENSSMAG00000005354	polr2f	100	98.425	ENSATEG00000008929	polr2f	100	98.425	Anabas_testudineus
ENSSMAG00000005354	polr2f	80	89.109	ENSAPLG00000015235	POLR2F	85	88.679	Anas_platyrhynchos
ENSSMAG00000005354	polr2f	100	89.764	ENSACAG00000015288	POLR2F	100	89.764	Anolis_carolinensis
ENSSMAG00000005354	polr2f	100	88.976	ENSANAG00000020840	POLR2F	100	88.976	Aotus_nancymaae
ENSSMAG00000005354	polr2f	100	97.638	ENSACLG00000016129	polr2f	100	97.638	Astatotilapia_calliptera
ENSSMAG00000005354	polr2f	100	97.638	ENSAMXG00000012812	polr2f	100	97.638	Astyanax_mexicanus
ENSSMAG00000005354	polr2f	100	88.976	ENSBTAG00000004820	POLR2F	100	88.976	Bos_taurus
ENSSMAG00000005354	polr2f	63	77.500	WBGene00007355	rpb-6	74	66.990	Caenorhabditis_elegans
ENSSMAG00000005354	polr2f	100	88.976	ENSCJAG00000048241	POLR2F	100	88.976	Callithrix_jacchus
ENSSMAG00000005354	polr2f	100	88.189	ENSCAFG00000001437	POLR2F	100	88.189	Canis_familiaris
ENSSMAG00000005354	polr2f	83	89.623	ENSCHIG00000012907	POLR2F	83	89.623	Capra_hircus
ENSSMAG00000005354	polr2f	100	88.189	ENSTSYG00000008187	POLR2F	100	88.189	Carlito_syrichta
ENSSMAG00000005354	polr2f	83	89.623	ENSCAPG00000013419	POLR2F	83	89.623	Cavia_aperea
ENSSMAG00000005354	polr2f	100	88.976	ENSCPOG00000034094	POLR2F	100	88.976	Cavia_porcellus
ENSSMAG00000005354	polr2f	100	88.976	ENSCCAG00000036489	POLR2F	100	88.976	Cebus_capucinus
ENSSMAG00000005354	polr2f	100	88.976	ENSCATG00000041014	POLR2F	100	88.976	Cercocebus_atys
ENSSMAG00000005354	polr2f	100	88.976	ENSCLAG00000017167	POLR2F	100	88.976	Chinchilla_lanigera
ENSSMAG00000005354	polr2f	100	88.976	ENSCSAG00000006862	POLR2F	100	88.976	Chlorocebus_sabaeus
ENSSMAG00000005354	polr2f	83	90.566	ENSCPBG00000023030	POLR2F	54	90.566	Chrysemys_picta_bellii
ENSSMAG00000005354	polr2f	81	75.962	ENSCING00000019359	-	73	75.962	Ciona_intestinalis
ENSSMAG00000005354	polr2f	100	88.976	ENSCANG00000041884	POLR2F	100	88.976	Colobus_angolensis_palliatus
ENSSMAG00000005354	polr2f	100	88.976	ENSCGRG00001023541	POLR2F	100	88.976	Cricetulus_griseus_chok1gshd
ENSSMAG00000005354	polr2f	100	88.976	ENSCGRG00000011921	POLR2F	100	88.976	Cricetulus_griseus_crigri
ENSSMAG00000005354	polr2f	95	98.347	ENSCSEG00000006848	polr2f	95	98.347	Cynoglossus_semilaevis
ENSSMAG00000005354	polr2f	100	97.638	ENSCVAG00000010437	polr2f	100	97.638	Cyprinodon_variegatus
ENSSMAG00000005354	polr2f	100	95.276	ENSDARG00000036625	polr2f	100	95.276	Danio_rerio
ENSSMAG00000005354	polr2f	100	88.976	ENSDNOG00000005884	POLR2F	100	88.976	Dasypus_novemcinctus
ENSSMAG00000005354	polr2f	100	88.976	ENSDORG00000024789	Polr2f	100	88.976	Dipodomys_ordii
ENSSMAG00000005354	polr2f	78	70.588	FBgn0003275	RpII18	78	72.549	Drosophila_melanogaster
ENSSMAG00000005354	polr2f	77	67.347	ENSEBUG00000002842	-	90	64.423	Eptatretus_burgeri
ENSSMAG00000005354	polr2f	54	85.294	ENSEBUG00000008509	polr2f	70	85.294	Eptatretus_burgeri
ENSSMAG00000005354	polr2f	60	86.842	ENSEASG00005018802	-	68	86.842	Equus_asinus_asinus
ENSSMAG00000005354	polr2f	100	86.614	ENSEEUG00000011014	POLR2F	100	86.614	Erinaceus_europaeus
ENSSMAG00000005354	polr2f	100	95.276	ENSELUG00000000319	polr2f	100	95.276	Esox_lucius
ENSSMAG00000005354	polr2f	100	88.189	ENSFCAG00000002806	POLR2F	100	88.189	Felis_catus
ENSSMAG00000005354	polr2f	100	88.976	ENSFDAG00000009926	POLR2F	100	88.976	Fukomys_damarensis
ENSSMAG00000005354	polr2f	100	96.850	ENSFHEG00000005448	polr2f	100	96.850	Fundulus_heteroclitus
ENSSMAG00000005354	polr2f	100	89.764	ENSGMOG00000009967	polr2f	100	89.764	Gadus_morhua
ENSSMAG00000005354	polr2f	100	89.764	ENSGALG00000012291	POLR2F	100	89.764	Gallus_gallus
ENSSMAG00000005354	polr2f	100	96.850	ENSGAFG00000017573	polr2f	100	96.850	Gambusia_affinis
ENSSMAG00000005354	polr2f	100	94.488	ENSGACG00000007322	polr2f	100	94.488	Gasterosteus_aculeatus
ENSSMAG00000005354	polr2f	100	89.764	ENSGAGG00000021757	POLR2F	100	89.764	Gopherus_agassizii
ENSSMAG00000005354	polr2f	100	88.976	ENSGGOG00000005213	POLR2F	100	88.976	Gorilla_gorilla
ENSSMAG00000005354	polr2f	100	97.638	ENSHBUG00000022089	polr2f	100	97.638	Haplochromis_burtoni
ENSSMAG00000005354	polr2f	100	88.976	ENSHGLG00000018942	POLR2F	100	88.976	Heterocephalus_glaber_female
ENSSMAG00000005354	polr2f	100	88.976	ENSHGLG00100012851	POLR2F	100	88.976	Heterocephalus_glaber_male
ENSSMAG00000005354	polr2f	100	93.701	ENSHCOG00000006149	polr2f	100	93.701	Hippocampus_comes
ENSSMAG00000005354	polr2f	76	97.938	ENSIPUG00000000814	polr2f	100	97.938	Ictalurus_punctatus
ENSSMAG00000005354	polr2f	100	88.976	ENSSTOG00000025722	POLR2F	100	88.976	Ictidomys_tridecemlineatus
ENSSMAG00000005354	polr2f	100	88.976	ENSJJAG00000008097	Polr2f	100	88.976	Jaculus_jaculus
ENSSMAG00000005354	polr2f	100	97.638	ENSKMAG00000014230	polr2f	100	97.638	Kryptolebias_marmoratus
ENSSMAG00000005354	polr2f	94	95.000	ENSLBEG00000008383	polr2f	100	95.000	Labrus_bergylta
ENSSMAG00000005354	polr2f	100	92.913	ENSLACG00000003931	POLR2F	100	92.913	Latimeria_chalumnae
ENSSMAG00000005354	polr2f	100	95.385	ENSLOCG00000011827	polr2f	100	95.385	Lepisosteus_oculatus
ENSSMAG00000005354	polr2f	100	88.976	ENSLAFG00000012632	POLR2F	100	88.976	Loxodonta_africana
ENSSMAG00000005354	polr2f	100	88.976	ENSMFAG00000033687	POLR2F	100	88.976	Macaca_fascicularis
ENSSMAG00000005354	polr2f	83	89.623	ENSMMUG00000038231	POLR2F	87	89.623	Macaca_mulatta
ENSSMAG00000005354	polr2f	100	88.976	ENSMNEG00000044365	POLR2F	100	88.976	Macaca_nemestrina
ENSSMAG00000005354	polr2f	100	88.976	ENSMLEG00000033077	POLR2F	100	88.976	Mandrillus_leucophaeus
ENSSMAG00000005354	polr2f	100	97.638	ENSMAMG00000008056	polr2f	100	97.638	Mastacembelus_armatus
ENSSMAG00000005354	polr2f	100	97.638	ENSMZEG00005005705	polr2f	100	97.638	Maylandia_zebra
ENSSMAG00000005354	polr2f	100	89.764	ENSMGAG00000012504	POLR2F	100	89.764	Meleagris_gallopavo
ENSSMAG00000005354	polr2f	100	88.976	ENSMAUG00000018586	Polr2f	100	88.976	Mesocricetus_auratus
ENSSMAG00000005354	polr2f	100	88.976	ENSMICG00000013128	POLR2F	100	88.976	Microcebus_murinus
ENSSMAG00000005354	polr2f	100	88.976	ENSMOCG00000000237	Polr2f	100	88.976	Microtus_ochrogaster
ENSSMAG00000005354	polr2f	100	99.213	ENSMMOG00000005106	polr2f	100	99.213	Mola_mola
ENSSMAG00000005354	polr2f	100	88.976	ENSMODG00000019063	POLR2F	100	88.976	Monodelphis_domestica
ENSSMAG00000005354	polr2f	100	98.425	ENSMALG00000001444	polr2f	100	98.425	Monopterus_albus
ENSSMAG00000005354	polr2f	100	88.189	MGP_CAROLIEiJ_G0020006	Polr2f	100	88.189	Mus_caroli
ENSSMAG00000005354	polr2f	100	88.189	ENSMUSG00000033020	Polr2f	100	88.189	Mus_musculus
ENSSMAG00000005354	polr2f	100	88.189	MGP_PahariEiJ_G0020008	Polr2f	100	88.189	Mus_pahari
ENSSMAG00000005354	polr2f	100	88.189	MGP_SPRETEiJ_G0020904	Polr2f	100	88.189	Mus_spretus
ENSSMAG00000005354	polr2f	100	88.189	ENSMPUG00000012997	POLR2F	100	88.189	Mustela_putorius_furo
ENSSMAG00000005354	polr2f	98	83.065	ENSMLUG00000029612	-	98	83.065	Myotis_lucifugus
ENSSMAG00000005354	polr2f	100	86.822	ENSMLUG00000014315	-	100	86.822	Myotis_lucifugus
ENSSMAG00000005354	polr2f	100	88.976	ENSNGAG00000020682	Polr2f	100	88.976	Nannospalax_galili
ENSSMAG00000005354	polr2f	100	98.425	ENSNBRG00000002492	polr2f	100	98.425	Neolamprologus_brichardi
ENSSMAG00000005354	polr2f	100	88.976	ENSNLEG00000014987	-	100	88.976	Nomascus_leucogenys
ENSSMAG00000005354	polr2f	100	88.976	ENSODEG00000014123	POLR2F	100	88.976	Octodon_degus
ENSSMAG00000005354	polr2f	100	98.425	ENSONIG00000008394	polr2f	100	98.425	Oreochromis_niloticus
ENSSMAG00000005354	polr2f	100	89.764	ENSOANG00000014684	POLR2F	100	89.764	Ornithorhynchus_anatinus
ENSSMAG00000005354	polr2f	100	88.976	ENSOCUG00000012064	POLR2F	100	88.976	Oryctolagus_cuniculus
ENSSMAG00000005354	polr2f	100	96.850	ENSORLG00000014580	polr2f	100	96.850	Oryzias_latipes
ENSSMAG00000005354	polr2f	100	97.638	ENSORLG00020006910	polr2f	100	97.638	Oryzias_latipes_hni
ENSSMAG00000005354	polr2f	90	95.614	ENSORLG00015015332	polr2f	77	95.614	Oryzias_latipes_hsok
ENSSMAG00000005354	polr2f	80	95.098	ENSOMEG00000006530	polr2f	58	97.959	Oryzias_melastigma
ENSSMAG00000005354	polr2f	100	88.976	ENSOGAG00000025463	POLR2F	100	88.976	Otolemur_garnettii
ENSSMAG00000005354	polr2f	100	88.976	ENSOARG00000014692	POLR2F	100	88.976	Ovis_aries
ENSSMAG00000005354	polr2f	100	88.976	ENSPPAG00000024276	POLR2F	100	88.976	Pan_paniscus
ENSSMAG00000005354	polr2f	100	88.189	ENSPPRG00000013030	POLR2F	100	88.189	Panthera_pardus
ENSSMAG00000005354	polr2f	82	88.462	ENSPTIG00000000632	POLR2F	85	88.462	Panthera_tigris_altaica
ENSSMAG00000005354	polr2f	100	88.976	ENSPTRG00000014356	POLR2F	100	88.976	Pan_troglodytes
ENSSMAG00000005354	polr2f	100	88.976	ENSPANG00000023979	POLR2F	100	88.976	Papio_anubis
ENSSMAG00000005354	polr2f	100	97.638	ENSPKIG00000002464	polr2f	100	97.638	Paramormyrops_kingsleyae
ENSSMAG00000005354	polr2f	56	95.775	ENSPSIG00000013913	POLR2F	100	95.775	Pelodiscus_sinensis
ENSSMAG00000005354	polr2f	100	99.213	ENSPMGG00000009619	polr2f	100	99.213	Periophthalmus_magnuspinnatus
ENSSMAG00000005354	polr2f	100	88.976	ENSPEMG00000008322	Polr2f	100	88.976	Peromyscus_maniculatus_bairdii
ENSSMAG00000005354	polr2f	100	88.976	ENSPCIG00000012000	-	100	88.976	Phascolarctos_cinereus
ENSSMAG00000005354	polr2f	100	97.638	ENSPFOG00000000139	polr2f	100	97.638	Poecilia_formosa
ENSSMAG00000005354	polr2f	100	97.638	ENSPLAG00000000988	polr2f	100	97.638	Poecilia_latipinna
ENSSMAG00000005354	polr2f	100	97.638	ENSPMEG00000019063	polr2f	100	97.638	Poecilia_mexicana
ENSSMAG00000005354	polr2f	77	97.959	ENSPREG00000016749	polr2f	100	97.959	Poecilia_reticulata
ENSSMAG00000005354	polr2f	100	88.976	ENSPPYG00000011809	POLR2F	100	88.976	Pongo_abelii
ENSSMAG00000005354	polr2f	100	88.976	ENSPCOG00000025716	POLR2F	100	88.976	Propithecus_coquereli
ENSSMAG00000005354	polr2f	79	86.000	ENSPVAG00000010107	POLR2F	64	86.000	Pteropus_vampyrus
ENSSMAG00000005354	polr2f	100	97.638	ENSPNYG00000019790	polr2f	100	97.638	Pundamilia_nyererei
ENSSMAG00000005354	polr2f	100	98.425	ENSPNAG00000009017	polr2f	100	98.425	Pygocentrus_nattereri
ENSSMAG00000005354	polr2f	100	88.189	ENSRNOG00000011214	Polr2f	100	88.189	Rattus_norvegicus
ENSSMAG00000005354	polr2f	100	88.976	ENSRBIG00000044878	POLR2F	100	88.976	Rhinopithecus_bieti
ENSSMAG00000005354	polr2f	100	88.976	ENSRROG00000019586	POLR2F	100	88.976	Rhinopithecus_roxellana
ENSSMAG00000005354	polr2f	100	88.976	ENSSBOG00000023340	POLR2F	100	88.976	Saimiri_boliviensis_boliviensis
ENSSMAG00000005354	polr2f	100	88.976	ENSSHAG00000008502	POLR2F	100	88.976	Sarcophilus_harrisii
ENSSMAG00000005354	polr2f	100	96.850	ENSSFOG00015012810	polr2f	100	96.850	Scleropages_formosus
ENSSMAG00000005354	polr2f	100	99.213	ENSSDUG00000016273	polr2f	100	99.213	Seriola_dumerili
ENSSMAG00000005354	polr2f	100	99.213	ENSSLDG00000024895	polr2f	100	99.213	Seriola_lalandi_dorsalis
ENSSMAG00000005354	polr2f	100	89.764	ENSSPUG00000011343	POLR2F	100	89.764	Sphenodon_punctatus
ENSSMAG00000005354	polr2f	100	97.638	ENSSPAG00000019646	polr2f	100	97.638	Stegastes_partitus
ENSSMAG00000005354	polr2f	100	88.189	ENSSSCG00000000116	POLR2F	100	88.189	Sus_scrofa
ENSSMAG00000005354	polr2f	57	88.889	ENSTGUG00000016504	-	88	88.312	Taeniopygia_guttata
ENSSMAG00000005354	polr2f	80	90.099	ENSTGUG00000010476	POLR2F	93	88.976	Taeniopygia_guttata
ENSSMAG00000005354	polr2f	100	98.425	ENSTRUG00000021130	polr2f	71	98.425	Takifugu_rubripes
ENSSMAG00000005354	polr2f	100	98.425	ENSTNIG00000010827	polr2f	100	98.425	Tetraodon_nigroviridis
ENSSMAG00000005354	polr2f	79	86.000	ENSTTRG00000004817	POLR2F	64	86.000	Tursiops_truncatus
ENSSMAG00000005354	polr2f	100	88.189	ENSUAMG00000020504	POLR2F	100	88.189	Ursus_americanus
ENSSMAG00000005354	polr2f	100	88.189	ENSUMAG00000015052	POLR2F	100	88.189	Ursus_maritimus
ENSSMAG00000005354	polr2f	83	88.679	ENSVVUG00000024021	POLR2F	80	88.679	Vulpes_vulpes
ENSSMAG00000005354	polr2f	100	90.551	ENSXETG00000006346	polr2f	100	90.551	Xenopus_tropicalis
ENSSMAG00000005354	polr2f	100	97.638	ENSXCOG00000015983	polr2f	100	97.638	Xiphophorus_couchianus
ENSSMAG00000005354	polr2f	100	97.638	ENSXMAG00000001559	polr2f	100	97.638	Xiphophorus_maculatus