EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000005429 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3603 bases
Position: chr12:24542619-24546221
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008784	Mitoc_L55	PF09776.9	2.1e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008893	-	423	-	ENSSMAP00000008784	140 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005429's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005429	zgc:171480	97	67.808	ENSAPOG00000002881	zgc:171480	100	67.808	Acanthochromis_polyacanthus
ENSSMAG00000005429	zgc:171480	99	67.857	ENSACIG00000001646	zgc:171480	99	67.857	Amphilophus_citrinellus
ENSSMAG00000005429	zgc:171480	97	68.493	ENSAOCG00000016155	zgc:171480	100	68.493	Amphiprion_ocellaris
ENSSMAG00000005429	zgc:171480	97	69.863	ENSAPEG00000022327	zgc:171480	100	69.863	Amphiprion_percula
ENSSMAG00000005429	zgc:171480	97	67.808	ENSATEG00000005625	zgc:171480	98	67.808	Anabas_testudineus
ENSSMAG00000005429	zgc:171480	71	59.406	ENSACAG00000006897	-	80	59.406	Anolis_carolinensis
ENSSMAG00000005429	zgc:171480	99	65.000	ENSACLG00000005172	zgc:171480	99	65.000	Astatotilapia_calliptera
ENSSMAG00000005429	zgc:171480	73	65.686	ENSAMXG00000043839	zgc:171480	78	65.686	Astyanax_mexicanus
ENSSMAG00000005429	zgc:171480	77	57.407	ENSCPBG00000001771	-	84	57.407	Chrysemys_picta_bellii
ENSSMAG00000005429	zgc:171480	99	54.676	ENSCSEG00000019533	zgc:171480	99	54.676	Cynoglossus_semilaevis
ENSSMAG00000005429	zgc:171480	73	59.804	ENSDARG00000043402	zgc:171480	77	59.804	Danio_rerio
ENSSMAG00000005429	zgc:171480	73	57.282	ENSELUG00000007716	zgc:171480	79	57.282	Esox_lucius
ENSSMAG00000005429	zgc:171480	69	48.454	ENSFALG00000001083	-	100	48.454	Ficedula_albicollis
ENSSMAG00000005429	zgc:171480	76	70.093	ENSFHEG00000000203	zgc:171480	77	70.093	Fundulus_heteroclitus
ENSSMAG00000005429	zgc:171480	73	71.569	ENSGMOG00000019009	zgc:171480	100	71.569	Gadus_morhua
ENSSMAG00000005429	zgc:171480	71	52.525	ENSGALG00000038820	-	87	54.455	Gallus_gallus
ENSSMAG00000005429	zgc:171480	76	68.868	ENSGAFG00000004832	-	74	68.868	Gambusia_affinis
ENSSMAG00000005429	zgc:171480	66	80.435	ENSGACG00000002136	zgc:171480	100	80.435	Gasterosteus_aculeatus
ENSSMAG00000005429	zgc:171480	74	56.311	ENSGAGG00000001806	-	83	56.311	Gopherus_agassizii
ENSSMAG00000005429	zgc:171480	99	65.000	ENSHBUG00000007895	zgc:171480	99	65.000	Haplochromis_burtoni
ENSSMAG00000005429	zgc:171480	91	66.142	ENSHCOG00000003526	zgc:171480	65	66.142	Hippocampus_comes
ENSSMAG00000005429	zgc:171480	73	59.223	ENSIPUG00000001273	mrpl55	78	59.223	Ictalurus_punctatus
ENSSMAG00000005429	zgc:171480	74	73.786	ENSKMAG00000002011	zgc:171480	81	73.786	Kryptolebias_marmoratus
ENSSMAG00000005429	zgc:171480	97	68.613	ENSLBEG00000016107	-	100	68.613	Labrus_bergylta
ENSSMAG00000005429	zgc:171480	97	68.613	ENSLBEG00000010915	zgc:171480	100	68.613	Labrus_bergylta
ENSSMAG00000005429	zgc:171480	74	61.538	ENSLACG00000016281	zgc:171480	79	61.538	Latimeria_chalumnae
ENSSMAG00000005429	zgc:171480	83	64.179	ENSMAMG00000022250	zgc:171480	91	64.179	Mastacembelus_armatus
ENSSMAG00000005429	zgc:171480	99	65.000	ENSMZEG00005015585	zgc:171480	99	65.000	Maylandia_zebra
ENSSMAG00000005429	zgc:171480	71	52.525	ENSMGAG00000002612	-	87	52.525	Meleagris_gallopavo
ENSSMAG00000005429	zgc:171480	74	57.282	ENSMMOG00000008740	-	78	57.282	Mola_mola
ENSSMAG00000005429	zgc:171480	74	68.932	ENSMALG00000019823	zgc:171480	82	68.932	Monopterus_albus
ENSSMAG00000005429	zgc:171480	99	63.571	ENSNBRG00000019447	zgc:171480	99	63.571	Neolamprologus_brichardi
ENSSMAG00000005429	zgc:171480	97	64.493	ENSONIG00000007645	zgc:171480	100	64.493	Oreochromis_niloticus
ENSSMAG00000005429	zgc:171480	74	64.423	ENSORLG00020006963	zgc:171480	78	64.423	Oryzias_latipes_hni
ENSSMAG00000005429	zgc:171480	73	66.667	ENSORLG00015003266	zgc:171480	76	66.667	Oryzias_latipes_hsok
ENSSMAG00000005429	zgc:171480	74	65.049	ENSOMEG00000008184	zgc:171480	75	65.049	Oryzias_melastigma
ENSSMAG00000005429	zgc:171480	73	58.252	ENSPKIG00000006753	zgc:171480	80	58.252	Paramormyrops_kingsleyae
ENSSMAG00000005429	zgc:171480	77	56.481	ENSPSIG00000010893	-	84	56.481	Pelodiscus_sinensis
ENSSMAG00000005429	zgc:171480	75	65.094	ENSPMGG00000012657	-	82	65.094	Periophthalmus_magnuspinnatus
ENSSMAG00000005429	zgc:171480	66	50.526	ENSPMAG00000000867	zgc:171480	88	48.544	Petromyzon_marinus
ENSSMAG00000005429	zgc:171480	71	54.455	ENSPCIG00000021848	-	79	54.455	Phascolarctos_cinereus
ENSSMAG00000005429	zgc:171480	84	63.559	ENSPFOG00000012703	zgc:171480	84	63.559	Poecilia_formosa
ENSSMAG00000005429	zgc:171480	84	64.407	ENSPREG00000020328	zgc:171480	84	64.407	Poecilia_reticulata
ENSSMAG00000005429	zgc:171480	73	61.165	ENSPNAG00000017309	zgc:171480	78	61.165	Pygocentrus_nattereri
ENSSMAG00000005429	zgc:171480	96	51.095	ENSSFOG00015015668	mrpl55	100	51.095	Scleropages_formosus
ENSSMAG00000005429	zgc:171480	98	70.423	ENSSDUG00000022556	zgc:171480	95	70.423	Seriola_dumerili
ENSSMAG00000005429	zgc:171480	98	70.423	ENSSLDG00000019598	zgc:171480	95	70.423	Seriola_lalandi_dorsalis
ENSSMAG00000005429	zgc:171480	71	54.000	ENSSPUG00000000735	-	80	54.000	Sphenodon_punctatus
ENSSMAG00000005429	zgc:171480	97	63.636	ENSSPAG00000011598	zgc:171480	100	63.636	Stegastes_partitus
ENSSMAG00000005429	zgc:171480	76	66.038	ENSTRUG00000003082	zgc:171480	75	66.038	Takifugu_rubripes
ENSSMAG00000005429	zgc:171480	74	66.990	ENSXCOG00000005887	zgc:171480	83	66.990	Xiphophorus_couchianus
ENSSMAG00000005429	zgc:171480	73	69.608	ENSXMAG00000007937	zgc:171480	73	69.608	Xiphophorus_maculatus