EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000005446 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3626 bases
Position: chr13:14287192-14290817
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008848	Sua5_yciO_yrdC	PF01300.18	3.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008956	-	2613	-	ENSSMAP00000008848	871 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005446	si:ch211-153b23.3	100	67.310	ENSACIG00000006968	si:ch211-153b23.3	99	67.310	Amphilophus_citrinellus
ENSSMAG00000005446	si:ch211-153b23.3	100	84.738	ENSAOCG00000010974	si:ch211-153b23.3	99	84.738	Amphiprion_ocellaris
ENSSMAG00000005446	si:ch211-153b23.3	100	84.852	ENSAPEG00000014700	si:ch211-153b23.3	99	84.852	Amphiprion_percula
ENSSMAG00000005446	si:ch211-153b23.3	100	83.864	ENSATEG00000004956	si:ch211-153b23.3	99	83.864	Anabas_testudineus
ENSSMAG00000005446	si:ch211-153b23.3	58	33.648	ENSACLG00000005471	si:ch211-153b23.4	58	33.648	Astatotilapia_calliptera
ENSSMAG00000005446	si:ch211-153b23.3	100	81.549	ENSACLG00000005894	si:ch211-153b23.3	99	81.549	Astatotilapia_calliptera
ENSSMAG00000005446	si:ch211-153b23.3	100	72.437	ENSAMXG00000038564	si:ch211-153b23.3	99	72.437	Astyanax_mexicanus
ENSSMAG00000005446	si:ch211-153b23.3	100	80.455	ENSCSEG00000014853	si:ch211-153b23.3	99	80.455	Cynoglossus_semilaevis
ENSSMAG00000005446	si:ch211-153b23.3	100	82.460	ENSCVAG00000021124	si:ch211-153b23.3	99	82.460	Cyprinodon_variegatus
ENSSMAG00000005446	si:ch211-153b23.3	51	34.513	ENSCVAG00000021145	si:ch211-153b23.4	54	34.658	Cyprinodon_variegatus
ENSSMAG00000005446	si:ch211-153b23.3	100	71.879	ENSDARG00000104919	si:ch211-153b23.3	99	71.879	Danio_rerio
ENSSMAG00000005446	si:ch211-153b23.3	83	85.849	ENSELUG00000004912	si:ch211-153b23.3	99	85.849	Esox_lucius
ENSSMAG00000005446	si:ch211-153b23.3	56	33.333	ENSFALG00000011343	-	59	33.333	Ficedula_albicollis
ENSSMAG00000005446	si:ch211-153b23.3	58	32.252	ENSFHEG00000010001	si:ch211-153b23.4	64	32.252	Fundulus_heteroclitus
ENSSMAG00000005446	si:ch211-153b23.3	100	84.055	ENSFHEG00000010030	si:ch211-153b23.3	99	84.055	Fundulus_heteroclitus
ENSSMAG00000005446	si:ch211-153b23.3	100	82.232	ENSGAFG00000007455	si:ch211-153b23.3	99	82.232	Gambusia_affinis
ENSSMAG00000005446	si:ch211-153b23.3	60	30.074	ENSGAGG00000024601	-	71	30.074	Gopherus_agassizii
ENSSMAG00000005446	si:ch211-153b23.3	55	33.134	ENSHBUG00000000013	si:ch211-153b23.4	64	33.134	Haplochromis_burtoni
ENSSMAG00000005446	si:ch211-153b23.3	100	81.777	ENSHBUG00000001760	si:ch211-153b23.3	99	81.777	Haplochromis_burtoni
ENSSMAG00000005446	si:ch211-153b23.3	100	71.526	ENSIPUG00000015213	si:ch211-153b23.3	99	71.526	Ictalurus_punctatus
ENSSMAG00000005446	si:ch211-153b23.3	100	82.400	ENSKMAG00000006792	si:ch211-153b23.3	99	82.400	Kryptolebias_marmoratus
ENSSMAG00000005446	si:ch211-153b23.3	58	31.569	ENSKMAG00000006919	-	58	31.758	Kryptolebias_marmoratus
ENSSMAG00000005446	si:ch211-153b23.3	58	31.698	ENSKMAG00000006829	si:ch211-153b23.4	63	31.520	Kryptolebias_marmoratus
ENSSMAG00000005446	si:ch211-153b23.3	100	83.182	ENSLBEG00000026324	si:ch211-153b23.3	99	83.182	Labrus_bergylta
ENSSMAG00000005446	si:ch211-153b23.3	94	57.295	ENSLACG00000005800	-	99	56.821	Latimeria_chalumnae
ENSSMAG00000005446	si:ch211-153b23.3	84	55.102	ENSLOCG00000015063	si:ch211-153b23.3	98	55.102	Lepisosteus_oculatus
ENSSMAG00000005446	si:ch211-153b23.3	58	31.478	ENSMAMG00000009358	si:ch211-153b23.4	63	31.478	Mastacembelus_armatus
ENSSMAG00000005446	si:ch211-153b23.3	100	83.599	ENSMAMG00000009328	si:ch211-153b23.3	99	83.599	Mastacembelus_armatus
ENSSMAG00000005446	si:ch211-153b23.3	58	31.609	ENSMAMG00000009277	si:ch211-153b23.4	62	31.609	Mastacembelus_armatus
ENSSMAG00000005446	si:ch211-153b23.3	100	81.891	ENSMZEG00005011450	si:ch211-153b23.3	99	81.891	Maylandia_zebra
ENSSMAG00000005446	si:ch211-153b23.3	58	33.459	ENSMZEG00005011433	si:ch211-153b23.4	62	33.459	Maylandia_zebra
ENSSMAG00000005446	si:ch211-153b23.3	53	33.966	ENSMGAG00000005478	-	56	33.966	Meleagris_gallopavo
ENSSMAG00000005446	si:ch211-153b23.3	100	83.655	ENSMMOG00000004436	si:ch211-153b23.3	99	83.655	Mola_mola
ENSSMAG00000005446	si:ch211-153b23.3	58	33.270	ENSNBRG00000013392	si:ch211-153b23.4	64	33.270	Neolamprologus_brichardi
ENSSMAG00000005446	si:ch211-153b23.3	100	81.891	ENSNBRG00000013370	si:ch211-153b23.3	99	81.891	Neolamprologus_brichardi
ENSSMAG00000005446	si:ch211-153b23.3	58	33.459	ENSONIG00000017875	si:ch211-153b23.4	59	33.459	Oreochromis_niloticus
ENSSMAG00000005446	si:ch211-153b23.3	100	79.481	ENSORLG00000006161	si:ch211-153b23.3	99	79.481	Oryzias_latipes
ENSSMAG00000005446	si:ch211-153b23.3	98	80.513	ENSORLG00020000910	si:ch211-153b23.3	100	80.513	Oryzias_latipes_hni
ENSSMAG00000005446	si:ch211-153b23.3	98	79.744	ENSORLG00015003698	si:ch211-153b23.3	100	79.744	Oryzias_latipes_hsok
ENSSMAG00000005446	si:ch211-153b23.3	58	32.190	ENSOMEG00000007682	si:ch211-153b23.4	58	32.190	Oryzias_melastigma
ENSSMAG00000005446	si:ch211-153b23.3	100	81.060	ENSOMEG00000007661	si:ch211-153b23.3	99	81.060	Oryzias_melastigma
ENSSMAG00000005446	si:ch211-153b23.3	98	71.263	ENSPKIG00000022450	si:ch211-153b23.3	100	71.263	Paramormyrops_kingsleyae
ENSSMAG00000005446	si:ch211-153b23.3	99	50.885	ENSPKIG00000021029	-	99	50.885	Paramormyrops_kingsleyae
ENSSMAG00000005446	si:ch211-153b23.3	82	81.633	ENSPMGG00000001311	si:ch211-153b23.3	99	81.633	Periophthalmus_magnuspinnatus
ENSSMAG00000005446	si:ch211-153b23.3	100	82.712	ENSPFOG00000012289	si:ch211-153b23.3	99	82.712	Poecilia_formosa
ENSSMAG00000005446	si:ch211-153b23.3	100	83.504	ENSPLAG00000016320	si:ch211-153b23.3	99	83.504	Poecilia_latipinna
ENSSMAG00000005446	si:ch211-153b23.3	100	83.713	ENSPMEG00000008884	si:ch211-153b23.3	99	83.713	Poecilia_mexicana
ENSSMAG00000005446	si:ch211-153b23.3	58	33.459	ENSPNYG00000000250	si:ch211-153b23.4	62	33.459	Pundamilia_nyererei
ENSSMAG00000005446	si:ch211-153b23.3	100	81.663	ENSPNYG00000000251	si:ch211-153b23.3	99	81.663	Pundamilia_nyererei
ENSSMAG00000005446	si:ch211-153b23.3	100	74.175	ENSPNAG00000019592	si:ch211-153b23.3	99	74.175	Pygocentrus_nattereri
ENSSMAG00000005446	si:ch211-153b23.3	68	50.647	ENSSFOG00015009030	-	96	50.647	Scleropages_formosus
ENSSMAG00000005446	si:ch211-153b23.3	100	72.472	ENSSFOG00015010910	si:ch211-153b23.3	99	72.472	Scleropages_formosus
ENSSMAG00000005446	si:ch211-153b23.3	53	33.193	ENSSFOG00015010891	si:ch211-153b23.4	54	33.193	Scleropages_formosus
ENSSMAG00000005446	si:ch211-153b23.3	58	32.122	ENSSDUG00000006671	si:ch211-153b23.4	63	32.122	Seriola_dumerili
ENSSMAG00000005446	si:ch211-153b23.3	100	86.758	ENSSLDG00000008629	si:ch211-153b23.3	99	86.758	Seriola_lalandi_dorsalis
ENSSMAG00000005446	si:ch211-153b23.3	53	34.519	ENSTGUG00000005499	-	57	34.519	Taeniopygia_guttata
ENSSMAG00000005446	si:ch211-153b23.3	99	78.211	ENSTRUG00000020530	si:ch211-153b23.3	99	78.670	Takifugu_rubripes
ENSSMAG00000005446	si:ch211-153b23.3	93	83.650	ENSTNIG00000008962	si:ch211-153b23.3	99	83.650	Tetraodon_nigroviridis
ENSSMAG00000005446	si:ch211-153b23.3	58	32.887	ENSXMAG00000021388	si:ch211-153b23.4	62	32.887	Xiphophorus_maculatus
ENSSMAG00000005446	si:ch211-153b23.3	100	82.574	ENSXMAG00000029318	si:ch211-153b23.3	99	82.574	Xiphophorus_maculatus