EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000005485 (Gene tree)
Gene ID: -
Gene Symbol: snupn
Alias: rnut1|wu:fc41a03|zgc:77819
Full Name: snurportin 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 29208 bases
Position: chr10:6455313-6484520
Accession: ZDB-GENE-030131-3464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000008893	Snurportin1	PF11538.8	1e-16	1	1
ENSSMAP00000008880	Snurportin1	PF11538.8	1e-16	1	1
ENSSMAP00000008868	Snurportin1	PF11538.8	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000008977	-	2522	-	ENSSMAP00000008868	401 (aa)	-	-
ENSSMAT00000008989	-	2561	-	ENSSMAP00000008880	373 (aa)	-	A0A2U9BUV3
ENSSMAT00000009003	-	1086	-	ENSSMAP00000008893	361 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005485's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005485	snupn	94	69.275	ENSG00000169371	SNUPN	100	77.778	Homo_sapiens
ENSSMAG00000005485	snupn	99	93.280	ENSAPOG00000016953	snupn	99	93.280	Acanthochromis_polyacanthus
ENSSMAG00000005485	snupn	95	68.012	ENSAMEG00000008291	SNUPN	96	68.103	Ailuropoda_melanoleuca
ENSSMAG00000005485	snupn	99	91.398	ENSACIG00000012409	snupn	99	91.398	Amphilophus_citrinellus
ENSSMAG00000005485	snupn	99	93.280	ENSAOCG00000018096	snupn	99	93.280	Amphiprion_ocellaris
ENSSMAG00000005485	snupn	99	93.280	ENSAPEG00000008834	snupn	99	93.280	Amphiprion_percula
ENSSMAG00000005485	snupn	99	93.280	ENSATEG00000021019	snupn	99	93.280	Anabas_testudineus
ENSSMAG00000005485	snupn	95	68.314	ENSANAG00000025568	SNUPN	96	69.275	Aotus_nancymaae
ENSSMAG00000005485	snupn	99	90.323	ENSACLG00000025155	snupn	99	90.323	Astatotilapia_calliptera
ENSSMAG00000005485	snupn	98	79.452	ENSAMXG00000038311	snupn	99	79.452	Astyanax_mexicanus
ENSSMAG00000005485	snupn	95	67.908	ENSBTAG00000021293	SNUPN	96	67.908	Bos_taurus
ENSSMAG00000005485	snupn	81	43.771	WBGene00017746	F23F1.5	88	43.771	Caenorhabditis_elegans
ENSSMAG00000005485	snupn	94	68.824	ENSCJAG00000003005	SNUPN	95	69.501	Callithrix_jacchus
ENSSMAG00000005485	snupn	95	66.860	ENSCAFG00000018035	SNUPN	96	67.246	Canis_familiaris
ENSSMAG00000005485	snupn	95	67.335	ENSCHIG00000018047	SNUPN	96	67.335	Capra_hircus
ENSSMAG00000005485	snupn	95	67.241	ENSTSYG00000037224	SNUPN	96	67.241	Carlito_syrichta
ENSSMAG00000005485	snupn	94	59.827	ENSCAPG00000005061	SNUPN	98	59.490	Cavia_aperea
ENSSMAG00000005485	snupn	94	68.786	ENSCPOG00000034772	SNUPN	98	68.272	Cavia_porcellus
ENSSMAG00000005485	snupn	95	68.314	ENSCCAG00000016169	-	95	69.795	Cebus_capucinus
ENSSMAG00000005485	snupn	95	67.529	ENSCATG00000039783	SNUPN	96	68.481	Cercocebus_atys
ENSSMAG00000005485	snupn	93	67.836	ENSCLAG00000016968	SNUPN	95	68.605	Chinchilla_lanigera
ENSSMAG00000005485	snupn	95	67.529	ENSCSAG00000014576	-	86	68.481	Chlorocebus_sabaeus
ENSSMAG00000005485	snupn	95	66.379	ENSCSAG00000019246	-	95	67.826	Chlorocebus_sabaeus
ENSSMAG00000005485	snupn	94	53.779	ENSCHOG00000005403	SNUPN	95	54.203	Choloepus_hoffmanni
ENSSMAG00000005485	snupn	94	69.452	ENSCPBG00000022172	SNUPN	91	69.452	Chrysemys_picta_bellii
ENSSMAG00000005485	snupn	95	67.816	ENSCANG00000029707	SNUPN	96	68.768	Colobus_angolensis_palliatus
ENSSMAG00000005485	snupn	95	68.103	ENSCGRG00001004622	Snupn	97	69.253	Cricetulus_griseus_chok1gshd
ENSSMAG00000005485	snupn	95	68.103	ENSCGRG00000002515	Snupn	97	69.253	Cricetulus_griseus_crigri
ENSSMAG00000005485	snupn	99	83.602	ENSCSEG00000003160	snupn	89	83.690	Cynoglossus_semilaevis
ENSSMAG00000005485	snupn	99	85.791	ENSCVAG00000010502	snupn	99	85.791	Cyprinodon_variegatus
ENSSMAG00000005485	snupn	99	76.408	ENSDARG00000008395	snupn	99	76.408	Danio_rerio
ENSSMAG00000005485	snupn	94	66.862	ENSDNOG00000044304	SNUPN	90	67.251	Dasypus_novemcinctus
ENSSMAG00000005485	snupn	94	68.406	ENSDORG00000009051	Snupn	95	68.406	Dipodomys_ordii
ENSSMAG00000005485	snupn	94	57.434	ENSETEG00000013792	SNUPN	95	57.434	Echinops_telfairi
ENSSMAG00000005485	snupn	96	56.712	ENSEBUG00000006682	snupn	96	56.712	Eptatretus_burgeri
ENSSMAG00000005485	snupn	95	66.954	ENSEASG00005015697	SNUPN	93	67.908	Equus_asinus_asinus
ENSSMAG00000005485	snupn	94	67.442	ENSECAG00000017726	SNUPN	95	68.406	Equus_caballus
ENSSMAG00000005485	snupn	65	68.047	ENSEEUG00000000981	-	65	69.412	Erinaceus_europaeus
ENSSMAG00000005485	snupn	99	78.701	ENSELUG00000023305	snupn	99	78.701	Esox_lucius
ENSSMAG00000005485	snupn	95	67.435	ENSFCAG00000040981	SNUPN	96	67.816	Felis_catus
ENSSMAG00000005485	snupn	94	68.895	ENSFDAG00000011599	SNUPN	96	68.895	Fukomys_damarensis
ENSSMAG00000005485	snupn	99	89.785	ENSFHEG00000017627	snupn	99	89.785	Fundulus_heteroclitus
ENSSMAG00000005485	snupn	94	82.000	ENSGMOG00000009272	snupn	100	83.761	Gadus_morhua
ENSSMAG00000005485	snupn	89	63.746	ENSGALG00000029537	SNUPN	95	63.037	Gallus_gallus
ENSSMAG00000005485	snupn	99	87.936	ENSGAFG00000004954	snupn	99	87.936	Gambusia_affinis
ENSSMAG00000005485	snupn	99	87.778	ENSGACG00000007450	snupn	100	92.286	Gasterosteus_aculeatus
ENSSMAG00000005485	snupn	96	67.787	ENSGAGG00000022470	SNUPN	97	68.067	Gopherus_agassizii
ENSSMAG00000005485	snupn	55	65.079	ENSGGOG00000004581	-	92	65.079	Gorilla_gorilla
ENSSMAG00000005485	snupn	99	90.860	ENSHBUG00000006950	snupn	99	90.860	Haplochromis_burtoni
ENSSMAG00000005485	snupn	94	67.638	ENSHGLG00000000536	SNUPN	96	68.314	Heterocephalus_glaber_female
ENSSMAG00000005485	snupn	94	67.638	ENSHGLG00100016161	SNUPN	96	68.314	Heterocephalus_glaber_male
ENSSMAG00000005485	snupn	100	84.656	ENSHCOG00000007262	snupn	99	84.921	Hippocampus_comes
ENSSMAG00000005485	snupn	98	78.082	ENSIPUG00000014460	Snupn	99	78.177	Ictalurus_punctatus
ENSSMAG00000005485	snupn	94	67.055	ENSSTOG00000005904	SNUPN	95	68.023	Ictidomys_tridecemlineatus
ENSSMAG00000005485	snupn	99	81.452	ENSKMAG00000009957	snupn	99	81.720	Kryptolebias_marmoratus
ENSSMAG00000005485	snupn	99	90.716	ENSLBEG00000020694	snupn	99	91.512	Labrus_bergylta
ENSSMAG00000005485	snupn	96	67.236	ENSLACG00000015801	SNUPN	97	67.806	Latimeria_chalumnae
ENSSMAG00000005485	snupn	94	80.460	ENSLOCG00000015064	snupn	95	80.460	Lepisosteus_oculatus
ENSSMAG00000005485	snupn	95	66.667	ENSLAFG00000004422	SNUPN	96	67.049	Loxodonta_africana
ENSSMAG00000005485	snupn	77	66.292	ENSMFAG00000003706	SNUPN	94	67.241	Macaca_fascicularis
ENSSMAG00000005485	snupn	95	67.816	ENSMMUG00000004784	SNUPN	96	68.768	Macaca_mulatta
ENSSMAG00000005485	snupn	95	63.793	ENSMLEG00000041966	SNUPN	96	63.793	Mandrillus_leucophaeus
ENSSMAG00000005485	snupn	99	93.011	ENSMAMG00000023109	snupn	99	93.011	Mastacembelus_armatus
ENSSMAG00000005485	snupn	99	90.591	ENSMZEG00005010806	snupn	99	90.591	Maylandia_zebra
ENSSMAG00000005485	snupn	95	67.908	ENSMAUG00000020426	Snupn	97	69.341	Mesocricetus_auratus
ENSSMAG00000005485	snupn	95	67.622	ENSMICG00000016438	SNUPN	95	68.116	Microcebus_murinus
ENSSMAG00000005485	snupn	95	68.966	ENSMOCG00000014238	Snupn	97	68.966	Microtus_ochrogaster
ENSSMAG00000005485	snupn	99	91.153	ENSMMOG00000001321	snupn	99	92.225	Mola_mola
ENSSMAG00000005485	snupn	96	67.227	ENSMODG00000008852	SNUPN	97	67.227	Monodelphis_domestica
ENSSMAG00000005485	snupn	99	89.785	ENSMALG00000015058	snupn	99	89.785	Monopterus_albus
ENSSMAG00000005485	snupn	94	69.767	MGP_CAROLIEiJ_G0032259	Snupn	96	69.767	Mus_caroli
ENSSMAG00000005485	snupn	94	69.477	ENSMUSG00000055334	Snupn	96	69.477	Mus_musculus
ENSSMAG00000005485	snupn	94	69.767	MGP_PahariEiJ_G0015126	Snupn	96	69.767	Mus_pahari
ENSSMAG00000005485	snupn	94	69.477	MGP_SPRETEiJ_G0033399	Snupn	96	69.477	Mus_spretus
ENSSMAG00000005485	snupn	95	67.147	ENSMPUG00000017324	SNUPN	95	68.023	Mustela_putorius_furo
ENSSMAG00000005485	snupn	94	67.630	ENSMLUG00000027517	-	95	67.630	Myotis_lucifugus
ENSSMAG00000005485	snupn	94	57.061	ENSMLUG00000000038	-	99	57.061	Myotis_lucifugus
ENSSMAG00000005485	snupn	95	62.464	ENSMLUG00000027485	-	96	63.143	Myotis_lucifugus
ENSSMAG00000005485	snupn	95	68.103	ENSNGAG00000018735	Snupn	96	68.678	Nannospalax_galili
ENSSMAG00000005485	snupn	99	90.860	ENSNBRG00000017919	snupn	99	90.860	Neolamprologus_brichardi
ENSSMAG00000005485	snupn	95	44.540	ENSNLEG00000035240	-	78	75.000	Nomascus_leucogenys
ENSSMAG00000005485	snupn	95	56.734	ENSOPRG00000015889	-	96	57.020	Ochotona_princeps
ENSSMAG00000005485	snupn	88	59.190	ENSODEG00000014491	SNUPN	98	58.383	Octodon_degus
ENSSMAG00000005485	snupn	97	91.185	ENSONIG00000012855	snupn	99	91.185	Oreochromis_niloticus
ENSSMAG00000005485	snupn	95	67.241	ENSOCUG00000008801	SNUPN	96	67.622	Oryctolagus_cuniculus
ENSSMAG00000005485	snupn	99	87.366	ENSORLG00000001836	snupn	99	87.366	Oryzias_latipes
ENSSMAG00000005485	snupn	99	86.828	ENSORLG00020021175	snupn	99	86.828	Oryzias_latipes_hni
ENSSMAG00000005485	snupn	99	87.097	ENSORLG00015014444	snupn	99	87.097	Oryzias_latipes_hsok
ENSSMAG00000005485	snupn	99	88.674	ENSOMEG00000004853	snupn	99	88.674	Oryzias_melastigma
ENSSMAG00000005485	snupn	95	65.043	ENSOGAG00000004915	SNUPN	96	66.000	Otolemur_garnettii
ENSSMAG00000005485	snupn	95	67.622	ENSOARG00000001991	SNUPN	93	67.622	Ovis_aries
ENSSMAG00000005485	snupn	94	69.565	ENSPPAG00000034351	SNUPN	95	69.565	Pan_paniscus
ENSSMAG00000005485	snupn	95	67.435	ENSPPRG00000023192	SNUPN	96	67.816	Panthera_pardus
ENSSMAG00000005485	snupn	95	67.435	ENSPTIG00000003528	SNUPN	96	67.816	Panthera_tigris_altaica
ENSSMAG00000005485	snupn	94	69.565	ENSPTRG00000007302	SNUPN	95	69.565	Pan_troglodytes
ENSSMAG00000005485	snupn	95	59.195	ENSPANG00000034514	SNUPN	96	60.172	Papio_anubis
ENSSMAG00000005485	snupn	94	80.938	ENSPKIG00000012444	snupn	96	81.232	Paramormyrops_kingsleyae
ENSSMAG00000005485	snupn	94	68.588	ENSPSIG00000015229	SNUPN	95	68.588	Pelodiscus_sinensis
ENSSMAG00000005485	snupn	94	80.337	ENSPMGG00000023843	snupn	95	80.337	Periophthalmus_magnuspinnatus
ENSSMAG00000005485	snupn	94	68.314	ENSPCIG00000007854	SNUPN	95	68.314	Phascolarctos_cinereus
ENSSMAG00000005485	snupn	99	89.785	ENSPFOG00000014221	snupn	99	89.362	Poecilia_formosa
ENSSMAG00000005485	snupn	99	89.516	ENSPLAG00000002339	snupn	99	89.096	Poecilia_latipinna
ENSSMAG00000005485	snupn	99	89.247	ENSPMEG00000012436	snupn	99	88.830	Poecilia_mexicana
ENSSMAG00000005485	snupn	99	88.978	ENSPREG00000012683	snupn	99	88.564	Poecilia_reticulata
ENSSMAG00000005485	snupn	94	61.739	ENSPPYG00000006663	SNUPN	94	61.739	Pongo_abelii
ENSSMAG00000005485	snupn	94	68.023	ENSPCOG00000025482	SNUPN	95	68.023	Propithecus_coquereli
ENSSMAG00000005485	snupn	93	66.860	ENSPVAG00000010035	SNUPN	96	66.476	Pteropus_vampyrus
ENSSMAG00000005485	snupn	99	90.860	ENSPNYG00000008752	snupn	99	90.860	Pundamilia_nyererei
ENSSMAG00000005485	snupn	96	81.020	ENSPNAG00000026875	snupn	98	81.020	Pygocentrus_nattereri
ENSSMAG00000005485	snupn	94	69.477	ENSRNOG00000005426	Snupn	96	69.477	Rattus_norvegicus
ENSSMAG00000005485	snupn	95	67.529	ENSRBIG00000038665	SNUPN	96	68.481	Rhinopithecus_bieti
ENSSMAG00000005485	snupn	95	67.816	ENSRROG00000043625	SNUPN	96	68.768	Rhinopithecus_roxellana
ENSSMAG00000005485	snupn	95	68.605	ENSSBOG00000029086	-	96	69.565	Saimiri_boliviensis_boliviensis
ENSSMAG00000005485	snupn	89	84.830	ENSSFOG00015022264	snupn	66	84.830	Scleropages_formosus
ENSSMAG00000005485	snupn	99	95.430	ENSSDUG00000023461	snupn	99	95.430	Seriola_dumerili
ENSSMAG00000005485	snupn	99	95.161	ENSSLDG00000001425	snupn	99	95.161	Seriola_lalandi_dorsalis
ENSSMAG00000005485	snupn	94	56.977	ENSSARG00000005585	SNUPN	94	57.971	Sorex_araneus
ENSSMAG00000005485	snupn	94	66.006	ENSSPUG00000014331	SNUPN	95	66.667	Sphenodon_punctatus
ENSSMAG00000005485	snupn	99	93.548	ENSSPAG00000001216	snupn	99	93.548	Stegastes_partitus
ENSSMAG00000005485	snupn	95	68.481	ENSSSCG00000001877	SNUPN	96	68.481	Sus_scrofa
ENSSMAG00000005485	snupn	99	89.785	ENSTRUG00000016085	snupn	98	89.812	Takifugu_rubripes
ENSSMAG00000005485	snupn	93	74.709	ENSTNIG00000008456	snupn	100	75.072	Tetraodon_nigroviridis
ENSSMAG00000005485	snupn	94	66.957	ENSTBEG00000002434	SNUPN	95	66.957	Tupaia_belangeri
ENSSMAG00000005485	snupn	95	61.318	ENSTTRG00000011484	SNUPN	96	61.318	Tursiops_truncatus
ENSSMAG00000005485	snupn	95	68.012	ENSUAMG00000022723	SNUPN	96	68.103	Ursus_americanus
ENSSMAG00000005485	snupn	95	68.300	ENSUMAG00000003738	SNUPN	96	68.391	Ursus_maritimus
ENSSMAG00000005485	snupn	95	66.957	ENSVVUG00000019574	SNUPN	96	66.957	Vulpes_vulpes
ENSSMAG00000005485	snupn	94	67.614	ENSXETG00000015280	snupn	99	68.182	Xenopus_tropicalis
ENSSMAG00000005485	snupn	99	88.978	ENSXMAG00000006634	snupn	99	88.978	Xiphophorus_maculatus