EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000005533 (Gene tree)
Gene ID
-
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
1430 bases
Position
chr2:21490194-21491623
Accession
ZDB-GENE-040930-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000009044LSMPF01423.222e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000009154-264-ENSSMAP0000000904487 (aa)--
Gene Model
Click here to download ENSSMAG00000005533's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005533's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000005533snrpf7650.000ENSSMAG00000004550lsm68350.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000005533snrpf8694.667ENSG00000139343SNRPF8794.667Homo_sapiens
ENSSMAG00000005533snrpf9898.824ENSAPOG00000003377snrpf6698.824Acanthochromis_polyacanthus
ENSSMAG00000005533snrpf9896.471ENSAMEG00000002166-10096.471Ailuropoda_melanoleuca
ENSSMAG00000005533snrpf8781.579ENSAMEG00000018718-8782.667Ailuropoda_melanoleuca
ENSSMAG00000005533snrpf9798.810ENSACIG00000013216snrpf9998.810Amphilophus_citrinellus
ENSSMAG00000005533snrpf9798.810ENSAOCG00000015108snrpf9998.810Amphiprion_ocellaris
ENSSMAG00000005533snrpf9798.810ENSAPEG00000022022snrpf9998.810Amphiprion_percula
ENSSMAG00000005533snrpf9798.810ENSATEG00000022625snrpf9098.810Anabas_testudineus
ENSSMAG00000005533snrpf8793.421ENSACAG00000014073SNRPF8793.421Anolis_carolinensis
ENSSMAG00000005533snrpf8665.333ENSANAG00000025860-8565.333Aotus_nancymaae
ENSSMAG00000005533snrpf8290.141ENSANAG00000020297-6590.141Aotus_nancymaae
ENSSMAG00000005533snrpf8694.667ENSANAG00000032845SNRPF8794.667Aotus_nancymaae
ENSSMAG00000005533snrpf9798.810ENSACLG00000016066snrpf9998.810Astatotilapia_calliptera
ENSSMAG00000005533snrpf9997.674ENSAMXG00000007421snrpf10097.674Astyanax_mexicanus
ENSSMAG00000005533snrpf8694.667ENSBTAG00000016271SNRPF8794.667Bos_taurus
ENSSMAG00000005533snrpf9089.744ENSBTAG00000050012-9389.333Bos_taurus
ENSSMAG00000005533snrpf8970.130WBGene00004918snr-58572.222Caenorhabditis_elegans
ENSSMAG00000005533snrpf8694.667ENSCJAG00000002705-8794.667Callithrix_jacchus
ENSSMAG00000005533snrpf8487.671ENSCAFG00000031151-8590.411Canis_familiaris
ENSSMAG00000005533snrpf8694.667ENSCAFG00000006395-6894.667Canis_familiaris
ENSSMAG00000005533snrpf9084.615ENSCAFG00020013161-7492.857Canis_lupus_dingo
ENSSMAG00000005533snrpf8487.671ENSCAFG00020010823-8590.411Canis_lupus_dingo
ENSSMAG00000005533snrpf8681.333ENSTSYG00000030635-8781.333Carlito_syrichta
ENSSMAG00000005533snrpf9390.123ENSTSYG00000031636-6191.781Carlito_syrichta
ENSSMAG00000005533snrpf8689.474ENSTSYG00000036502-8789.474Carlito_syrichta
ENSSMAG00000005533snrpf9896.471ENSCAPG00000007242SNRPF10096.471Cavia_aperea
ENSSMAG00000005533snrpf8694.667ENSCPOG00000013898SNRPF8794.667Cavia_porcellus
ENSSMAG00000005533snrpf8694.667ENSCCAG00000037378-8794.667Cebus_capucinus
ENSSMAG00000005533snrpf9984.884ENSCCAG00000033627-5985.333Cebus_capucinus
ENSSMAG00000005533snrpf9994.186ENSCCAG00000017356-8794.667Cebus_capucinus
ENSSMAG00000005533snrpf8794.737ENSCLAG00000007200SNRPF8794.737Chinchilla_lanigera
ENSSMAG00000005533snrpf8694.667ENSCSAG00000003602-6194.667Chlorocebus_sabaeus
ENSSMAG00000005533snrpf7493.750ENSCHOG00000009392SNRPF10093.750Choloepus_hoffmanni
ENSSMAG00000005533snrpf9983.721ENSCPBG00000001985-8985.333Chrysemys_picta_bellii
ENSSMAG00000005533snrpf9986.047ENSCPBG00000026463-8786.667Chrysemys_picta_bellii
ENSSMAG00000005533snrpf8686.667ENSCPBG00000006227-8786.667Chrysemys_picta_bellii
ENSSMAG00000005533snrpf9890.588ENSCPBG00000024287-6091.892Chrysemys_picta_bellii
ENSSMAG00000005533snrpf10085.057ENSCSAVG00000007498-8686.842Ciona_savignyi
ENSSMAG00000005533snrpf9896.471ENSCGRG00001017100-9696.471Cricetulus_griseus_chok1gshd
ENSSMAG00000005533snrpf8489.041ENSCGRG00001008965-5789.041Cricetulus_griseus_chok1gshd
ENSSMAG00000005533snrpf9089.744ENSCGRG00000018878-9189.041Cricetulus_griseus_crigri
ENSSMAG00000005533snrpf9896.471ENSCGRG00000000336-9696.471Cricetulus_griseus_crigri
ENSSMAG00000005533snrpf9897.647ENSCSEG00000004748snrpf10096.512Cynoglossus_semilaevis
ENSSMAG00000005533snrpf9898.824ENSCVAG00000000397snrpf6798.824Cyprinodon_variegatus
ENSSMAG00000005533snrpf9995.455ENSDARG00000105037snrpf10095.455Danio_rerio
ENSSMAG00000005533snrpf8792.105ENSDNOG00000048989-6892.105Dasypus_novemcinctus
ENSSMAG00000005533snrpf8678.667ENSDNOG00000049373-6578.667Dasypus_novemcinctus
ENSSMAG00000005533snrpf8386.111ENSDORG00000025351-10086.111Dipodomys_ordii
ENSSMAG00000005533snrpf6893.220ENSDORG00000029740-7293.220Dipodomys_ordii
ENSSMAG00000005533snrpf9776.190FBgn0000426SmF8379.452Drosophila_melanogaster
ENSSMAG00000005533snrpf8694.667ENSETEG00000001558-8794.667Echinops_telfairi
ENSSMAG00000005533snrpf9474.390ENSEBUG00000001793-7285.075Eptatretus_burgeri
ENSSMAG00000005533snrpf8793.421ENSECAG00000019817SNRPF6293.421Equus_caballus
ENSSMAG00000005533snrpf9896.471ENSEEUG00000013509SNRPF10096.471Erinaceus_europaeus
ENSSMAG00000005533snrpf9997.674ENSELUG00000003121RUXF10097.674Esox_lucius
ENSSMAG00000005533snrpf9895.294ENSELUG00000007737RUXF8696.000Esox_lucius
ENSSMAG00000005533snrpf9775.000ENSFCAG00000031148-7273.077Felis_catus
ENSSMAG00000005533snrpf8672.000ENSFCAG00000021942-8772.000Felis_catus
ENSSMAG00000005533snrpf8694.667ENSFCAG00000029966-8794.667Felis_catus
ENSSMAG00000005533snrpf9896.471ENSFALG00000010799SNRPF9996.471Ficedula_albicollis
ENSSMAG00000005533snrpf8694.667ENSFDAG00000002831-8794.667Fukomys_damarensis
ENSSMAG00000005533snrpf9898.824ENSFHEG00000003240snrpf7598.824Fundulus_heteroclitus
ENSSMAG00000005533snrpf9898.824ENSGMOG00000007741snrpf10098.824Gadus_morhua
ENSSMAG00000005533snrpf8694.667ENSGALG00000011409SNRPF8794.667Gallus_gallus
ENSSMAG00000005533snrpf10096.552ENSGAFG00000016187snrpf10096.552Gambusia_affinis
ENSSMAG00000005533snrpf98100.000ENSGACG00000020055snrpf100100.000Gasterosteus_aculeatus
ENSSMAG00000005533snrpf8589.189ENSGAGG00000012945-6989.333Gopherus_agassizii
ENSSMAG00000005533snrpf7981.159ENSGAGG00000014132-8381.159Gopherus_agassizii
ENSSMAG00000005533snrpf6986.667ENSGAGG00000011163-8689.796Gopherus_agassizii
ENSSMAG00000005533snrpf9188.608ENSGAGG00000022991-8091.176Gopherus_agassizii
ENSSMAG00000005533snrpf7490.625ENSGAGG00000020974-5490.625Gopherus_agassizii
ENSSMAG00000005533snrpf9172.152ENSGGOG00000039564-9070.667Gorilla_gorilla
ENSSMAG00000005533snrpf9776.190ENSGGOG00000039936-8373.333Gorilla_gorilla
ENSSMAG00000005533snrpf9796.429ENSGGOG00000001127-9996.429Gorilla_gorilla
ENSSMAG00000005533snrpf8694.667ENSHGLG00000009108SNRPF8794.667Heterocephalus_glaber_female
ENSSMAG00000005533snrpf8693.333ENSHGLG00000021172-8793.333Heterocephalus_glaber_female
ENSSMAG00000005533snrpf9896.471ENSHGLG00100008103-10096.471Heterocephalus_glaber_male
ENSSMAG00000005533snrpf8693.333ENSHGLG00100019596-8793.333Heterocephalus_glaber_male
ENSSMAG00000005533snrpf7287.143ENSHCOG00000018663snrpf5587.143Hippocampus_comes
ENSSMAG00000005533snrpf9997.674ENSIPUG00000018994snrpf9998.810Ictalurus_punctatus
ENSSMAG00000005533snrpf8694.667ENSSTOG00000010434-8794.667Ictidomys_tridecemlineatus
ENSSMAG00000005533snrpf9980.233ENSJJAG00000010502-8981.333Jaculus_jaculus
ENSSMAG00000005533snrpf9976.744ENSJJAG00000004558-8977.333Jaculus_jaculus
ENSSMAG00000005533snrpf7789.552ENSJJAG00000004828-8691.071Jaculus_jaculus
ENSSMAG00000005533snrpf8694.667ENSJJAG00000011272-8794.667Jaculus_jaculus
ENSSMAG00000005533snrpf9798.810ENSKMAG00000013566snrpf9898.810Kryptolebias_marmoratus
ENSSMAG00000005533snrpf9996.512ENSLBEG00000008800snrpf10096.512Labrus_bergylta
ENSSMAG00000005533snrpf8793.421ENSLACG00000002456-6593.421Latimeria_chalumnae
ENSSMAG00000005533snrpf9997.674ENSLOCG00000015744snrpf10097.674Lepisosteus_oculatus
ENSSMAG00000005533snrpf9896.471ENSLAFG00000017426SNRPF9996.471Loxodonta_africana
ENSSMAG00000005533snrpf9797.619ENSMAMG00000016593snrpf9997.619Mastacembelus_armatus
ENSSMAG00000005533snrpf9798.810ENSMZEG00005014701snrpf9998.810Maylandia_zebra
ENSSMAG00000005533snrpf9796.429ENSMGAG00000011453-7696.429Meleagris_gallopavo
ENSSMAG00000005533snrpf7088.525ENSMAUG00000010289-6692.000Mesocricetus_auratus
ENSSMAG00000005533snrpf8690.667ENSMAUG00000008799-8790.667Mesocricetus_auratus
ENSSMAG00000005533snrpf7295.238ENSMAUG00000019737-8595.238Mesocricetus_auratus
ENSSMAG00000005533snrpf7295.238ENSMAUG00000016909-8595.238Mesocricetus_auratus
ENSSMAG00000005533snrpf8694.667ENSMICG00000012153-8794.667Microcebus_murinus
ENSSMAG00000005533snrpf8688.000ENSMICG00000030494-6088.000Microcebus_murinus
ENSSMAG00000005533snrpf8681.333ENSMOCG00000022166-8281.333Microtus_ochrogaster
ENSSMAG00000005533snrpf8694.667ENSMOCG00000020437Snrpf8794.667Microtus_ochrogaster
ENSSMAG00000005533snrpf7879.412ENSMOCG00000020220-8779.412Microtus_ochrogaster
ENSSMAG00000005533snrpf9897.647ENSMMOG00000007127snrpf10097.647Mola_mola
ENSSMAG00000005533snrpf8694.667ENSMODG00000008091SNRPF6694.667Monodelphis_domestica
ENSSMAG00000005533snrpf9798.810ENSMALG00000012328snrpf9998.810Monopterus_albus
ENSSMAG00000005533snrpf8694.667MGP_CAROLIEiJ_G0015735-8794.667Mus_caroli
ENSSMAG00000005533snrpf8694.667ENSMUSG00000020018Snrpf8794.667Mus_musculus
ENSSMAG00000005533snrpf8694.667MGP_PahariEiJ_G0031350Snrpf8794.667Mus_pahari
ENSSMAG00000005533snrpf8694.667MGP_SPRETEiJ_G0016553Snrpf8794.667Mus_spretus
ENSSMAG00000005533snrpf8694.667ENSMPUG00000007176-6794.667Mustela_putorius_furo
ENSSMAG00000005533snrpf9896.471ENSMLUG00000013577-10096.471Myotis_lucifugus
ENSSMAG00000005533snrpf8694.667ENSMLUG00000026149-7194.667Myotis_lucifugus
ENSSMAG00000005533snrpf9976.744ENSMLUG00000026269-7174.667Myotis_lucifugus
ENSSMAG00000005533snrpf8694.667ENSMLUG00000029201-7194.667Myotis_lucifugus
ENSSMAG00000005533snrpf8793.421ENSMLUG00000027932-7293.421Myotis_lucifugus
ENSSMAG00000005533snrpf8694.667ENSNGAG00000024292-8794.667Nannospalax_galili
ENSSMAG00000005533snrpf7288.889ENSNGAG00000005851-7188.333Nannospalax_galili
ENSSMAG00000005533snrpf9898.824ENSNBRG00000011682snrpf8798.824Neolamprologus_brichardi
ENSSMAG00000005533snrpf8570.270ENSMEUG00000000671SNRPF8770.270Notamacropus_eugenii
ENSSMAG00000005533snrpf9796.429ENSODEG00000010328-9996.429Octodon_degus
ENSSMAG00000005533snrpf10094.253ENSOCUG00000010925SNRPF7794.253Oryctolagus_cuniculus
ENSSMAG00000005533snrpf9898.824ENSORLG00020008216snrpf10098.824Oryzias_latipes_hni
ENSSMAG00000005533snrpf9898.824ENSORLG00015007418snrpf10098.824Oryzias_latipes_hsok
ENSSMAG00000005533snrpf97100.000ENSOMEG00000003018snrpf99100.000Oryzias_melastigma
ENSSMAG00000005533snrpf8693.333ENSOGAG00000030323-8793.333Otolemur_garnettii
ENSSMAG00000005533snrpf8694.667ENSOARG00000011853-6594.667Ovis_aries
ENSSMAG00000005533snrpf9172.152ENSPPAG00000037479-9170.667Pan_paniscus
ENSSMAG00000005533snrpf9776.190ENSPPAG00000037544-8373.333Pan_paniscus
ENSSMAG00000005533snrpf9773.810ENSPPRG00000007449-7773.333Panthera_pardus
ENSSMAG00000005533snrpf8694.667ENSPPRG00000005875-8794.667Panthera_pardus
ENSSMAG00000005533snrpf9776.190ENSPTIG00000005117-8973.333Panthera_tigris_altaica
ENSSMAG00000005533snrpf8694.667ENSPTIG00000007520SNRPF8794.667Panthera_tigris_altaica
ENSSMAG00000005533snrpf9172.152ENSPTRG00000047717-9170.667Pan_troglodytes
ENSSMAG00000005533snrpf9776.190ENSPTRG00000043814-8373.333Pan_troglodytes
ENSSMAG00000005533snrpf9898.824ENSPKIG00000014784snrpf9398.824Paramormyrops_kingsleyae
ENSSMAG00000005533snrpf9896.471ENSPSIG00000016462SNRPF9996.471Pelodiscus_sinensis
ENSSMAG00000005533snrpf9897.647ENSPMGG00000023548snrpf10097.647Periophthalmus_magnuspinnatus
ENSSMAG00000005533snrpf8694.667ENSPEMG00000023326Snrpf8794.667Peromyscus_maniculatus_bairdii
ENSSMAG00000005533snrpf9798.810ENSPLAG00000023932snrpf9998.810Poecilia_latipinna
ENSSMAG00000005533snrpf9798.810ENSPMEG00000003377snrpf9998.810Poecilia_mexicana
ENSSMAG00000005533snrpf10096.552ENSPREG00000022635snrpf10096.552Poecilia_reticulata
ENSSMAG00000005533snrpf8694.667ENSPPYG00000004847-8794.667Pongo_abelii
ENSSMAG00000005533snrpf8694.667ENSPCOG00000023833-8794.667Propithecus_coquereli
ENSSMAG00000005533snrpf8694.667ENSPVAG00000009036SNRPF8794.667Pteropus_vampyrus
ENSSMAG00000005533snrpf9798.810ENSPNYG00000021712snrpf9998.810Pundamilia_nyererei
ENSSMAG00000005533snrpf97100.000ENSPNAG00000019117snrpf99100.000Pygocentrus_nattereri
ENSSMAG00000005533snrpf8694.667ENSRNOG00000005556Snrpf8794.667Rattus_norvegicus
ENSSMAG00000005533snrpf8692.000ENSRBIG00000030414-8792.000Rhinopithecus_bieti
ENSSMAG00000005533snrpf8692.000ENSRROG00000021975-8792.000Rhinopithecus_roxellana
ENSSMAG00000005533snrpf8059.155YPR182WSMX38359.155Saccharomyces_cerevisiae
ENSSMAG00000005533snrpf8694.667ENSSBOG00000012868-8794.667Saimiri_boliviensis_boliviensis
ENSSMAG00000005533snrpf8680.000ENSSBOG00000032297-8680.000Saimiri_boliviensis_boliviensis
ENSSMAG00000005533snrpf9075.309ENSSBOG00000027638-9175.309Saimiri_boliviensis_boliviensis
ENSSMAG00000005533snrpf8694.667ENSSBOG00000036179-8794.667Saimiri_boliviensis_boliviensis
ENSSMAG00000005533snrpf9995.349ENSSHAG00000012294SNRPF7795.349Sarcophilus_harrisii
ENSSMAG00000005533snrpf7498.438ENSSFOG00015021523snrpf9698.438Scleropages_formosus
ENSSMAG00000005533snrpf7596.923ENSSDUG00000016283snrpf7796.923Seriola_dumerili
ENSSMAG00000005533snrpf9996.512ENSSLDG00000005119snrpf10096.512Seriola_lalandi_dorsalis
ENSSMAG00000005533snrpf9469.512ENSSLDG00000003885-9372.368Seriola_lalandi_dorsalis
ENSSMAG00000005533snrpf9796.429ENSSPUG00000014590-9996.429Sphenodon_punctatus
ENSSMAG00000005533snrpf9898.824ENSSPAG00000003283snrpf9798.824Stegastes_partitus
ENSSMAG00000005533snrpf8694.667ENSSSCG00000000895SNRPF8794.667Sus_scrofa
ENSSMAG00000005533snrpf7997.101ENSTRUG00000014956snrpf10097.101Takifugu_rubripes
ENSSMAG00000005533snrpf9996.512ENSTNIG00000012672snrpf10096.512Tetraodon_nigroviridis
ENSSMAG00000005533snrpf8669.333ENSTTRG00000006070SNRPF8769.333Tursiops_truncatus
ENSSMAG00000005533snrpf8694.667ENSUAMG00000008176-8794.667Ursus_americanus
ENSSMAG00000005533snrpf9982.558ENSUAMG00000001101-8884.000Ursus_americanus
ENSSMAG00000005533snrpf8694.667ENSUMAG00000003528-8794.667Ursus_maritimus
ENSSMAG00000005533snrpf8684.000ENSUMAG00000006177-8884.000Ursus_maritimus
ENSSMAG00000005533snrpf8694.667ENSVPAG00000008712-8794.667Vicugna_pacos
ENSSMAG00000005533snrpf9087.179ENSVVUG00000023821-9686.667Vulpes_vulpes
ENSSMAG00000005533snrpf8575.000ENSXETG00000021630snrpf8775.000Xenopus_tropicalis
ENSSMAG00000005533snrpf10096.552ENSXCOG00000013860snrpf10096.552Xiphophorus_couchianus
ENSSMAG00000005533snrpf9798.810ENSXMAG00000015448snrpf9998.810Xiphophorus_maculatus

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