EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000005608 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 81563 bases
Position: chr21:12177854-12259416
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000009075	RRM_1	PF00076.22	4.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000009185	-	5388	-	ENSSMAP00000009075	292 (aa)	-	-
ENSSMAT00000009194	-	956	-	ENSSMAP00000009084	146 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000005608	-	97	70.175	ENSSMAG00000015907	-	93	70.877
ENSSMAG00000005608	-	90	53.232	ENSSMAG00000001107	raly	89	52.330
ENSSMAG00000005608	-	79	53.138	ENSSMAG00000011147	-	99	51.579
ENSSMAG00000005608	-	75	53.571	ENSSMAG00000013592	-	89	47.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005608	-	100	72.635	ENSAPOG00000008744	-	100	71.959	Acanthochromis_polyacanthus
ENSSMAG00000005608	-	97	67.010	ENSACIG00000007143	-	97	67.010	Amphilophus_citrinellus
ENSSMAG00000005608	-	100	94.178	ENSAOCG00000001605	-	100	94.178	Amphiprion_ocellaris
ENSSMAG00000005608	-	100	73.737	ENSAOCG00000023599	-	100	72.635	Amphiprion_ocellaris
ENSSMAG00000005608	-	97	65.772	ENSATEG00000022219	-	93	69.900	Anabas_testudineus
ENSSMAG00000005608	-	79	90.043	ENSATEG00000023356	-	89	91.342	Anabas_testudineus
ENSSMAG00000005608	-	100	95.548	ENSACLG00000006949	-	100	95.548	Astatotilapia_calliptera
ENSSMAG00000005608	-	100	73.311	ENSACLG00000011720	-	100	73.311	Astatotilapia_calliptera
ENSSMAG00000005608	-	100	89.726	ENSAMXG00000019031	-	100	89.726	Astyanax_mexicanus
ENSSMAG00000005608	-	100	64.983	ENSAMXG00000032617	-	100	64.983	Astyanax_mexicanus
ENSSMAG00000005608	-	100	66.554	ENSCSEG00000014237	-	100	65.878	Cynoglossus_semilaevis
ENSSMAG00000005608	-	100	72.727	ENSCVAG00000013624	-	100	71.622	Cyprinodon_variegatus
ENSSMAG00000005608	-	100	90.476	ENSCVAG00000018104	-	100	91.837	Cyprinodon_variegatus
ENSSMAG00000005608	-	59	76.023	ENSDARG00000090292	ralyl	81	77.778	Danio_rerio
ENSSMAG00000005608	-	94	73.571	ENSELUG00000001702	-	97	75.714	Esox_lucius
ENSSMAG00000005608	-	57	77.576	ENSGMOG00000005914	-	100	77.576	Gadus_morhua
ENSSMAG00000005608	-	59	93.642	ENSGACG00000004991	-	91	95.783	Gasterosteus_aculeatus
ENSSMAG00000005608	-	100	73.064	ENSHBUG00000010040	-	100	71.959	Haplochromis_burtoni
ENSSMAG00000005608	-	100	95.548	ENSHBUG00000015412	-	100	95.548	Haplochromis_burtoni
ENSSMAG00000005608	-	100	85.666	ENSIPUG00000000507	ralyl	100	87.713	Ictalurus_punctatus
ENSSMAG00000005608	-	100	68.919	ENSKMAG00000022093	-	100	70.946	Kryptolebias_marmoratus
ENSSMAG00000005608	-	100	94.521	ENSKMAG00000018155	-	100	94.521	Kryptolebias_marmoratus
ENSSMAG00000005608	-	100	93.151	ENSLBEG00000011011	-	100	94.178	Labrus_bergylta
ENSSMAG00000005608	-	100	72.635	ENSLBEG00000012873	-	100	72.635	Labrus_bergylta
ENSSMAG00000005608	-	100	81.507	ENSLOCG00000012787	ralyl	99	80.822	Lepisosteus_oculatus
ENSSMAG00000005608	-	99	69.655	ENSMAMG00000001723	-	97	69.655	Mastacembelus_armatus
ENSSMAG00000005608	-	100	73.311	ENSMZEG00005024447	-	100	73.311	Maylandia_zebra
ENSSMAG00000005608	-	98	91.065	ENSMZEG00005018748	-	99	91.065	Maylandia_zebra
ENSSMAG00000005608	-	97	65.667	ENSMMOG00000020441	-	86	68.000	Mola_mola
ENSSMAG00000005608	-	100	74.074	ENSMALG00000019019	-	78	72.973	Monopterus_albus
ENSSMAG00000005608	-	100	91.126	ENSMALG00000012952	-	100	92.150	Monopterus_albus
ENSSMAG00000005608	-	98	90.378	ENSNBRG00000011376	-	99	90.378	Neolamprologus_brichardi
ENSSMAG00000005608	-	97	67.010	ENSNBRG00000011206	-	97	67.010	Neolamprologus_brichardi
ENSSMAG00000005608	-	100	93.151	ENSORLG00000012719	-	100	93.151	Oryzias_latipes
ENSSMAG00000005608	-	100	71.284	ENSORLG00000017934	-	100	70.946	Oryzias_latipes
ENSSMAG00000005608	-	100	70.946	ENSORLG00020000082	-	100	70.608	Oryzias_latipes_hni
ENSSMAG00000005608	-	100	93.151	ENSORLG00020004438	-	100	93.151	Oryzias_latipes_hni
ENSSMAG00000005608	-	100	71.284	ENSORLG00015004280	-	100	70.946	Oryzias_latipes_hsok
ENSSMAG00000005608	-	100	93.151	ENSORLG00015004727	-	100	93.151	Oryzias_latipes_hsok
ENSSMAG00000005608	-	100	70.608	ENSOMEG00000011821	-	100	70.270	Oryzias_melastigma
ENSSMAG00000005608	-	100	93.836	ENSOMEG00000001170	-	100	93.836	Oryzias_melastigma
ENSSMAG00000005608	-	100	77.474	ENSPKIG00000015926	-	100	77.474	Paramormyrops_kingsleyae
ENSSMAG00000005608	-	80	78.903	ENSPMGG00000014481	-	98	81.435	Periophthalmus_magnuspinnatus
ENSSMAG00000005608	-	99	67.230	ENSPMGG00000009532	-	99	67.230	Periophthalmus_magnuspinnatus
ENSSMAG00000005608	-	97	70.234	ENSPFOG00000006120	-	99	68.667	Poecilia_formosa
ENSSMAG00000005608	-	97	66.090	ENSPLAG00000009877	-	76	64.483	Poecilia_latipinna
ENSSMAG00000005608	-	97	93.357	ENSPLAG00000011323	ralyl	100	93.357	Poecilia_latipinna
ENSSMAG00000005608	-	97	66.090	ENSPMEG00000013624	-	80	64.483	Poecilia_mexicana
ENSSMAG00000005608	-	97	93.357	ENSPMEG00000023847	ralyl	100	93.357	Poecilia_mexicana
ENSSMAG00000005608	-	97	72.917	ENSPREG00000013805	-	100	68.354	Poecilia_reticulata
ENSSMAG00000005608	-	97	91.259	ENSPREG00000001956	ralyl	100	93.007	Poecilia_reticulata
ENSSMAG00000005608	-	98	91.065	ENSPNYG00000003548	-	99	91.065	Pundamilia_nyererei
ENSSMAG00000005608	-	97	67.010	ENSPNYG00000008772	-	97	67.010	Pundamilia_nyererei
ENSSMAG00000005608	-	100	88.014	ENSPNAG00000000498	-	88	88.014	Pygocentrus_nattereri
ENSSMAG00000005608	-	100	66.438	ENSPNAG00000026098	-	100	66.438	Pygocentrus_nattereri
ENSSMAG00000005608	-	100	88.435	ENSSFOG00015009401	-	100	88.435	Scleropages_formosus
ENSSMAG00000005608	-	100	66.781	ENSSFOG00015004575	-	96	73.498	Scleropages_formosus
ENSSMAG00000005608	-	100	93.515	ENSSDUG00000007587	-	100	94.539	Seriola_dumerili
ENSSMAG00000005608	-	100	73.737	ENSSDUG00000012473	-	100	72.635	Seriola_dumerili
ENSSMAG00000005608	-	100	95.904	ENSSLDG00000020603	-	100	95.904	Seriola_lalandi_dorsalis
ENSSMAG00000005608	-	100	73.401	ENSSLDG00000011534	-	100	72.297	Seriola_lalandi_dorsalis
ENSSMAG00000005608	-	97	63.958	ENSSPAG00000013858	-	96	62.329	Stegastes_partitus
ENSSMAG00000005608	-	82	74.477	ENSTRUG00000003829	-	95	70.318	Takifugu_rubripes
ENSSMAG00000005608	-	97	67.007	ENSTNIG00000005594	-	99	67.007	Tetraodon_nigroviridis
ENSSMAG00000005608	-	100	68.367	ENSXETG00000017729	ralyl	99	68.707	Xenopus_tropicalis
ENSSMAG00000005608	-	97	90.476	ENSXCOG00000015156	-	93	90.476	Xiphophorus_couchianus
ENSSMAG00000005608	-	100	73.737	ENSXMAG00000007614	-	100	72.635	Xiphophorus_maculatus
ENSSMAG00000005608	-	100	94.521	ENSXMAG00000008396	-	100	94.521	Xiphophorus_maculatus