EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000005822 (Gene tree)
Gene ID: -
Gene Symbol: tsn
Alias: id:ibd2900|wu:fb38b07|wu:fi31h02|zgc:123170
Full Name: translin
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 7755 bases
Position: chr14:18246866-18254620
Accession: ZDB-GENE-030131-6039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000009454	Translin	PF01997.16	3.9e-55	1	1
ENSSMAP00000009460	Translin	PF01997.16	3.9e-55	1	1
ENSSMAP00000009476	Translin	PF01997.16	1.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000009589	-	4677	-	ENSSMAP00000009476	260 (aa)	-	-
ENSSMAT00000009573	-	4479	-	ENSSMAP00000009460	227 (aa)	-	-
ENSSMAT00000009568	-	4563	-	ENSSMAP00000009454	227 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005822's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005822	tsn	99	78.125	ENSG00000211460	TSN	98	78.125	Homo_sapiens
ENSSMAG00000005822	tsn	100	92.070	ENSAPOG00000002063	tsn	100	92.070	Acanthochromis_polyacanthus
ENSSMAG00000005822	tsn	99	78.571	ENSAMEG00000005055	TSN	98	78.571	Ailuropoda_melanoleuca
ENSSMAG00000005822	tsn	100	91.630	ENSACIG00000021694	tsn	100	91.630	Amphilophus_citrinellus
ENSSMAG00000005822	tsn	100	92.070	ENSAOCG00000015574	tsn	100	92.195	Amphiprion_ocellaris
ENSSMAG00000005822	tsn	100	92.070	ENSAPEG00000001677	tsn	100	92.070	Amphiprion_percula
ENSSMAG00000005822	tsn	100	91.189	ENSATEG00000004115	tsn	100	91.189	Anabas_testudineus
ENSSMAG00000005822	tsn	94	77.169	ENSACAG00000004757	TSN	99	77.169	Anolis_carolinensis
ENSSMAG00000005822	tsn	100	77.632	ENSANAG00000026842	TSN	100	77.632	Aotus_nancymaae
ENSSMAG00000005822	tsn	100	91.189	ENSACLG00000020831	tsn	100	91.189	Astatotilapia_calliptera
ENSSMAG00000005822	tsn	100	86.784	ENSAMXG00000035417	tsn	100	86.784	Astyanax_mexicanus
ENSSMAG00000005822	tsn	99	78.571	ENSBTAG00000006059	TSN	98	78.571	Bos_taurus
ENSSMAG00000005822	tsn	50	65.487	ENSCJAG00000008511	-	88	65.487	Callithrix_jacchus
ENSSMAG00000005822	tsn	100	77.193	ENSCJAG00000044533	-	99	78.218	Callithrix_jacchus
ENSSMAG00000005822	tsn	100	77.632	ENSCJAG00000047222	-	100	77.632	Callithrix_jacchus
ENSSMAG00000005822	tsn	99	78.571	ENSCAFG00000004700	TSN	93	78.571	Canis_familiaris
ENSSMAG00000005822	tsn	99	78.571	ENSCAFG00020011747	TSN	98	78.571	Canis_lupus_dingo
ENSSMAG00000005822	tsn	99	78.571	ENSCHIG00000010715	TSN	98	78.571	Capra_hircus
ENSSMAG00000005822	tsn	99	78.125	ENSTSYG00000004395	TSN	98	78.125	Carlito_syrichta
ENSSMAG00000005822	tsn	89	65.842	ENSCAPG00000015595	TSN	79	65.842	Cavia_aperea
ENSSMAG00000005822	tsn	99	78.125	ENSCPOG00000035645	TSN	98	78.125	Cavia_porcellus
ENSSMAG00000005822	tsn	100	77.193	ENSCCAG00000026371	TSN	100	77.193	Cebus_capucinus
ENSSMAG00000005822	tsn	67	63.816	ENSCCAG00000034886	-	84	63.816	Cebus_capucinus
ENSSMAG00000005822	tsn	99	78.125	ENSCATG00000032155	TSN	98	78.125	Cercocebus_atys
ENSSMAG00000005822	tsn	99	78.125	ENSCLAG00000006171	TSN	98	78.125	Chinchilla_lanigera
ENSSMAG00000005822	tsn	99	78.125	ENSCSAG00000016712	TSN	98	78.125	Chlorocebus_sabaeus
ENSSMAG00000005822	tsn	67	72.185	ENSCPBG00000013741	-	80	72.185	Chrysemys_picta_bellii
ENSSMAG00000005822	tsn	97	66.516	ENSCPBG00000018116	-	96	66.516	Chrysemys_picta_bellii
ENSSMAG00000005822	tsn	96	48.165	ENSCING00000012612	-	100	48.165	Ciona_intestinalis
ENSSMAG00000005822	tsn	98	45.291	ENSCSAVG00000009485	-	99	45.291	Ciona_savignyi
ENSSMAG00000005822	tsn	99	78.125	ENSCANG00000041881	TSN	98	78.125	Colobus_angolensis_palliatus
ENSSMAG00000005822	tsn	100	77.632	ENSCGRG00001018233	Tsn	100	77.632	Cricetulus_griseus_chok1gshd
ENSSMAG00000005822	tsn	100	77.632	ENSCGRG00000008331	Tsn	100	77.632	Cricetulus_griseus_crigri
ENSSMAG00000005822	tsn	100	86.344	ENSCSEG00000005825	tsn	100	86.344	Cynoglossus_semilaevis
ENSSMAG00000005822	tsn	99	78.761	ENSCVAG00000022024	tsn	100	80.531	Cyprinodon_variegatus
ENSSMAG00000005822	tsn	100	85.463	ENSDARG00000041830	tsn	100	85.463	Danio_rerio
ENSSMAG00000005822	tsn	99	78.571	ENSDNOG00000025740	TSN	98	78.571	Dasypus_novemcinctus
ENSSMAG00000005822	tsn	99	78.125	ENSDORG00000026251	-	98	78.125	Dipodomys_ordii
ENSSMAG00000005822	tsn	95	53.241	FBgn0033528	trsn	91	53.241	Drosophila_melanogaster
ENSSMAG00000005822	tsn	99	78.571	ENSEASG00005004774	TSN	98	78.571	Equus_asinus_asinus
ENSSMAG00000005822	tsn	99	78.571	ENSECAG00000015930	TSN	98	78.571	Equus_caballus
ENSSMAG00000005822	tsn	75	81.765	ENSEEUG00000013935	TSN	98	81.765	Erinaceus_europaeus
ENSSMAG00000005822	tsn	100	87.665	ENSELUG00000007669	tsn	100	87.665	Esox_lucius
ENSSMAG00000005822	tsn	72	65.031	ENSFCAG00000022306	-	92	65.031	Felis_catus
ENSSMAG00000005822	tsn	99	78.571	ENSFCAG00000027149	TSN	98	78.571	Felis_catus
ENSSMAG00000005822	tsn	91	77.512	ENSFALG00000013247	TSN	91	77.512	Ficedula_albicollis
ENSSMAG00000005822	tsn	99	78.125	ENSFDAG00000012302	TSN	98	78.125	Fukomys_damarensis
ENSSMAG00000005822	tsn	100	90.749	ENSFHEG00000015531	tsn	100	90.749	Fundulus_heteroclitus
ENSSMAG00000005822	tsn	99	88.496	ENSGMOG00000009247	tsn	100	88.496	Gadus_morhua
ENSSMAG00000005822	tsn	100	76.419	ENSGALG00000011652	TSN	100	76.419	Gallus_gallus
ENSSMAG00000005822	tsn	100	92.070	ENSGAFG00000003816	tsn	100	92.070	Gambusia_affinis
ENSSMAG00000005822	tsn	100	88.987	ENSGACG00000000235	tsn	98	88.987	Gasterosteus_aculeatus
ENSSMAG00000005822	tsn	99	78.125	ENSGGOG00000002216	TSN	98	79.024	Gorilla_gorilla
ENSSMAG00000005822	tsn	100	90.749	ENSHBUG00000002340	tsn	85	90.749	Haplochromis_burtoni
ENSSMAG00000005822	tsn	99	78.125	ENSHGLG00000007038	TSN	98	78.125	Heterocephalus_glaber_female
ENSSMAG00000005822	tsn	99	78.125	ENSHGLG00100000069	TSN	98	78.125	Heterocephalus_glaber_male
ENSSMAG00000005822	tsn	98	87.444	ENSHCOG00000001756	tsn	99	87.444	Hippocampus_comes
ENSSMAG00000005822	tsn	100	86.344	ENSIPUG00000021370	tsn	100	86.344	Ictalurus_punctatus
ENSSMAG00000005822	tsn	99	78.125	ENSSTOG00000000972	TSN	98	78.125	Ictidomys_tridecemlineatus
ENSSMAG00000005822	tsn	99	78.571	ENSJJAG00000006730	Tsn	98	78.571	Jaculus_jaculus
ENSSMAG00000005822	tsn	100	91.630	ENSKMAG00000004996	tsn	100	91.630	Kryptolebias_marmoratus
ENSSMAG00000005822	tsn	100	92.070	ENSLBEG00000012620	tsn	100	92.070	Labrus_bergylta
ENSSMAG00000005822	tsn	100	63.043	ENSLACG00000005246	TSN	99	63.043	Latimeria_chalumnae
ENSSMAG00000005822	tsn	100	85.153	ENSLOCG00000002191	tsn	99	85.153	Lepisosteus_oculatus
ENSSMAG00000005822	tsn	99	72.687	ENSLAFG00000032428	TSN	98	72.687	Loxodonta_africana
ENSSMAG00000005822	tsn	99	78.125	ENSMFAG00000044217	TSN	98	78.125	Macaca_fascicularis
ENSSMAG00000005822	tsn	99	78.125	ENSMMUG00000021119	TSN	98	78.125	Macaca_mulatta
ENSSMAG00000005822	tsn	99	78.125	ENSMNEG00000040632	TSN	98	78.125	Macaca_nemestrina
ENSSMAG00000005822	tsn	55	72.581	ENSMLEG00000038656	TSN	96	72.581	Mandrillus_leucophaeus
ENSSMAG00000005822	tsn	100	90.749	ENSMAMG00000019536	tsn	100	90.749	Mastacembelus_armatus
ENSSMAG00000005822	tsn	100	91.189	ENSMZEG00005018715	tsn	85	91.189	Maylandia_zebra
ENSSMAG00000005822	tsn	77	77.966	ENSMGAG00000011956	TSN	90	77.966	Meleagris_gallopavo
ENSSMAG00000005822	tsn	100	73.246	ENSMAUG00000018800	Tsn	100	79.126	Mesocricetus_auratus
ENSSMAG00000005822	tsn	99	78.125	ENSMICG00000015793	TSN	98	78.125	Microcebus_murinus
ENSSMAG00000005822	tsn	99	78.667	ENSMOCG00000013248	Tsn	99	78.667	Microtus_ochrogaster
ENSSMAG00000005822	tsn	90	89.268	ENSMMOG00000019661	tsn	100	89.268	Mola_mola
ENSSMAG00000005822	tsn	97	76.471	ENSMODG00000000147	TSN	98	76.000	Monodelphis_domestica
ENSSMAG00000005822	tsn	100	90.749	ENSMALG00000001827	tsn	100	90.749	Monopterus_albus
ENSSMAG00000005822	tsn	100	77.632	ENSMUSG00000026374	Tsn	100	77.632	Mus_musculus
ENSSMAG00000005822	tsn	100	77.632	MGP_PahariEiJ_G0027742	Tsn	100	77.632	Mus_pahari
ENSSMAG00000005822	tsn	100	77.632	MGP_SPRETEiJ_G0015313	Tsn	100	77.632	Mus_spretus
ENSSMAG00000005822	tsn	99	78.571	ENSMPUG00000001056	TSN	98	78.571	Mustela_putorius_furo
ENSSMAG00000005822	tsn	89	80.198	ENSMLUG00000012656	TSN	98	80.198	Myotis_lucifugus
ENSSMAG00000005822	tsn	100	77.632	ENSNGAG00000010353	Tsn	100	77.632	Nannospalax_galili
ENSSMAG00000005822	tsn	100	90.749	ENSNBRG00000001193	tsn	100	90.749	Neolamprologus_brichardi
ENSSMAG00000005822	tsn	99	78.125	ENSNLEG00000032773	TSN	98	78.125	Nomascus_leucogenys
ENSSMAG00000005822	tsn	99	56.696	ENSMEUG00000006228	TSN	98	56.696	Notamacropus_eugenii
ENSSMAG00000005822	tsn	62	64.539	ENSOPRG00000004858	-	100	64.539	Ochotona_princeps
ENSSMAG00000005822	tsn	99	78.125	ENSODEG00000008386	-	98	78.125	Octodon_degus
ENSSMAG00000005822	tsn	99	62.054	ENSODEG00000005998	-	98	62.054	Octodon_degus
ENSSMAG00000005822	tsn	100	91.630	ENSONIG00000017060	tsn	100	91.630	Oreochromis_niloticus
ENSSMAG00000005822	tsn	88	78.894	ENSOANG00000003457	TSN	98	78.818	Ornithorhynchus_anatinus
ENSSMAG00000005822	tsn	99	77.778	ENSOCUG00000023529	TSN	99	77.778	Oryctolagus_cuniculus
ENSSMAG00000005822	tsn	100	90.308	ENSORLG00000010049	tsn	100	90.308	Oryzias_latipes
ENSSMAG00000005822	tsn	100	90.308	ENSORLG00020016476	tsn	100	90.308	Oryzias_latipes_hni
ENSSMAG00000005822	tsn	63	86.111	ENSORLG00020017000	-	84	86.111	Oryzias_latipes_hni
ENSSMAG00000005822	tsn	100	90.749	ENSORLG00015019192	tsn	100	90.749	Oryzias_latipes_hsok
ENSSMAG00000005822	tsn	100	91.630	ENSOMEG00000016335	tsn	100	91.630	Oryzias_melastigma
ENSSMAG00000005822	tsn	99	78.125	ENSOGAG00000030436	TSN	98	78.125	Otolemur_garnettii
ENSSMAG00000005822	tsn	99	78.571	ENSOARG00000013339	TSN	98	78.571	Ovis_aries
ENSSMAG00000005822	tsn	99	78.125	ENSPPAG00000032878	TSN	98	78.125	Pan_paniscus
ENSSMAG00000005822	tsn	99	78.571	ENSPPRG00000006531	TSN	98	78.571	Panthera_pardus
ENSSMAG00000005822	tsn	81	62.842	ENSPPRG00000004174	-	77	62.842	Panthera_pardus
ENSSMAG00000005822	tsn	56	70.312	ENSPTIG00000012953	TSN	88	69.466	Panthera_tigris_altaica
ENSSMAG00000005822	tsn	99	78.125	ENSPTRG00000012420	TSN	98	78.125	Pan_troglodytes
ENSSMAG00000005822	tsn	99	78.125	ENSPANG00000000733	TSN	98	78.125	Papio_anubis
ENSSMAG00000005822	tsn	100	87.665	ENSPKIG00000002005	tsn	100	87.665	Paramormyrops_kingsleyae
ENSSMAG00000005822	tsn	76	80.233	ENSPSIG00000006064	TSN	94	80.233	Pelodiscus_sinensis
ENSSMAG00000005822	tsn	100	88.987	ENSPMGG00000015287	tsn	100	88.987	Periophthalmus_magnuspinnatus
ENSSMAG00000005822	tsn	99	65.044	ENSPMAG00000009161	tsn	97	65.044	Petromyzon_marinus
ENSSMAG00000005822	tsn	89	79.803	ENSPCIG00000023491	TSN	98	79.703	Phascolarctos_cinereus
ENSSMAG00000005822	tsn	100	92.070	ENSPFOG00000016063	tsn	100	92.070	Poecilia_formosa
ENSSMAG00000005822	tsn	100	92.070	ENSPLAG00000010654	tsn	100	92.070	Poecilia_latipinna
ENSSMAG00000005822	tsn	100	92.070	ENSPMEG00000023570	tsn	100	92.070	Poecilia_mexicana
ENSSMAG00000005822	tsn	100	92.070	ENSPREG00000003481	tsn	100	92.070	Poecilia_reticulata
ENSSMAG00000005822	tsn	99	78.125	ENSPPYG00000012774	TSN	98	78.125	Pongo_abelii
ENSSMAG00000005822	tsn	75	81.176	ENSPCAG00000003549	TSN	98	81.176	Procavia_capensis
ENSSMAG00000005822	tsn	99	78.125	ENSPCOG00000011045	TSN	98	78.125	Propithecus_coquereli
ENSSMAG00000005822	tsn	99	78.571	ENSPVAG00000016702	TSN	98	78.571	Pteropus_vampyrus
ENSSMAG00000005822	tsn	100	91.189	ENSPNYG00000012396	tsn	85	91.189	Pundamilia_nyererei
ENSSMAG00000005822	tsn	100	86.344	ENSPNAG00000018140	tsn	100	86.344	Pygocentrus_nattereri
ENSSMAG00000005822	tsn	100	77.632	ENSRNOG00000002319	Tsn	100	77.632	Rattus_norvegicus
ENSSMAG00000005822	tsn	99	78.125	ENSRBIG00000041316	TSN	98	78.125	Rhinopithecus_bieti
ENSSMAG00000005822	tsn	99	78.125	ENSRROG00000029954	TSN	98	78.125	Rhinopithecus_roxellana
ENSSMAG00000005822	tsn	84	61.053	ENSSBOG00000015719	-	98	60.556	Saimiri_boliviensis_boliviensis
ENSSMAG00000005822	tsn	100	77.632	ENSSBOG00000028579	TSN	100	77.632	Saimiri_boliviensis_boliviensis
ENSSMAG00000005822	tsn	99	77.679	ENSSHAG00000011707	TSN	98	77.679	Sarcophilus_harrisii
ENSSMAG00000005822	tsn	100	87.225	ENSSFOG00015020668	tsn	100	87.225	Scleropages_formosus
ENSSMAG00000005822	tsn	100	92.070	ENSSDUG00000011388	tsn	100	92.070	Seriola_dumerili
ENSSMAG00000005822	tsn	100	92.070	ENSSLDG00000008206	tsn	100	92.070	Seriola_lalandi_dorsalis
ENSSMAG00000005822	tsn	100	53.070	ENSSARG00000007193	-	100	53.070	Sorex_araneus
ENSSMAG00000005822	tsn	100	78.947	ENSSPUG00000017518	TSN	100	78.947	Sphenodon_punctatus
ENSSMAG00000005822	tsn	100	92.070	ENSSPAG00000009283	tsn	100	92.070	Stegastes_partitus
ENSSMAG00000005822	tsn	99	78.571	ENSSSCG00000015729	TSN	98	80.198	Sus_scrofa
ENSSMAG00000005822	tsn	100	76.856	ENSTGUG00000004445	TSN	100	76.856	Taeniopygia_guttata
ENSSMAG00000005822	tsn	99	90.667	ENSTRUG00000013691	tsn	100	90.667	Takifugu_rubripes
ENSSMAG00000005822	tsn	100	88.546	ENSTNIG00000015707	tsn	100	88.546	Tetraodon_nigroviridis
ENSSMAG00000005822	tsn	99	78.125	ENSTBEG00000015319	TSN	98	78.125	Tupaia_belangeri
ENSSMAG00000005822	tsn	99	78.571	ENSTTRG00000005854	TSN	98	78.571	Tursiops_truncatus
ENSSMAG00000005822	tsn	99	78.571	ENSUAMG00000021618	TSN	98	78.571	Ursus_americanus
ENSSMAG00000005822	tsn	99	77.232	ENSUMAG00000008516	TSN	98	77.232	Ursus_maritimus
ENSSMAG00000005822	tsn	57	58.915	ENSVPAG00000009874	-	100	58.915	Vicugna_pacos
ENSSMAG00000005822	tsn	89	80.198	ENSVVUG00000027555	TSN	98	79.412	Vulpes_vulpes
ENSSMAG00000005822	tsn	97	75.000	ENSXETG00000000838	tsn	96	75.000	Xenopus_tropicalis
ENSSMAG00000005822	tsn	55	88.710	ENSXCOG00000018514	tsn	95	88.710	Xiphophorus_couchianus
ENSSMAG00000005822	tsn	100	92.511	ENSXMAG00000022538	tsn	100	92.511	Xiphophorus_maculatus