EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000005854 (Gene tree)
Gene ID: -
Gene Symbol: srsf2a
Alias: -
Full Name: serine/arginine-rich splicing factor 2a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 1482 bases
Position: chr18:16799243-16800724
Accession: ZDB-GENE-040426-2706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000009497	RRM_1	PF00076.22	7.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000009612	-	883	-	ENSSMAP00000009497	213 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000005854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000005854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000005854	srsf2a	54	30.252	ENSSMAG00000004566	sf3b6	90	30.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000005854	srsf2a	50	98.131	ENSAPOG00000024396	srsf2a	50	98.214	Acanthochromis_polyacanthus
ENSSMAG00000005854	srsf2a	99	69.626	ENSACIG00000018502	srsf2a	76	75.159	Amphilophus_citrinellus
ENSSMAG00000005854	srsf2a	53	99.107	ENSAOCG00000021878	srsf2a	51	99.107	Amphiprion_ocellaris
ENSSMAG00000005854	srsf2a	53	99.107	ENSAPEG00000023494	srsf2a	51	99.107	Amphiprion_percula
ENSSMAG00000005854	srsf2a	55	98.291	ENSATEG00000004082	srsf2a	52	98.291	Anabas_testudineus
ENSSMAG00000005854	srsf2a	52	93.694	ENSACAG00000008553	-	51	92.857	Anolis_carolinensis
ENSSMAG00000005854	srsf2a	50	95.327	ENSAMXG00000042718	srsf2a	54	95.614	Astyanax_mexicanus
ENSSMAG00000005854	srsf2a	50	93.458	ENSCCAG00000037532	SRSF2	51	92.857	Cebus_capucinus
ENSSMAG00000005854	srsf2a	99	63.256	ENSCHOG00000014019	-	53	90.741	Choloepus_hoffmanni
ENSSMAG00000005854	srsf2a	67	56.643	ENSCING00000004198	-	81	60.000	Ciona_intestinalis
ENSSMAG00000005854	srsf2a	53	98.214	ENSCSEG00000013387	srsf2a	54	98.291	Cynoglossus_semilaevis
ENSSMAG00000005854	srsf2a	53	96.429	ENSDARG00000057484	srsf2a	95	96.429	Danio_rerio
ENSSMAG00000005854	srsf2a	96	47.549	ENSDNOG00000033905	-	58	60.360	Dasypus_novemcinctus
ENSSMAG00000005854	srsf2a	98	79.439	ENSFALG00000000869	-	50	90.826	Ficedula_albicollis
ENSSMAG00000005854	srsf2a	52	93.694	ENSGALG00000017357	SRSF2	51	92.857	Gallus_gallus
ENSSMAG00000005854	srsf2a	50	98.131	ENSGACG00000003105	srsf2a	58	94.872	Gasterosteus_aculeatus
ENSSMAG00000005854	srsf2a	53	98.214	ENSKMAG00000009464	srsf2a	51	97.436	Kryptolebias_marmoratus
ENSSMAG00000005854	srsf2a	53	98.214	ENSLBEG00000027265	srsf2a	99	95.370	Labrus_bergylta
ENSSMAG00000005854	srsf2a	50	93.458	ENSLACG00000013394	srsf2a	51	93.750	Latimeria_chalumnae
ENSSMAG00000005854	srsf2a	53	92.857	ENSLOCG00000011252	srsf2a	56	90.000	Lepisosteus_oculatus
ENSSMAG00000005854	srsf2a	54	84.483	ENSMZEG00005001748	-	52	85.217	Maylandia_zebra
ENSSMAG00000005854	srsf2a	53	98.214	ENSMMOG00000020751	srsf2a	56	95.000	Mola_mola
ENSSMAG00000005854	srsf2a	59	55.118	ENSMLUG00000026613	-	58	58.475	Myotis_lucifugus
ENSSMAG00000005854	srsf2a	100	49.321	ENSOCUG00000021840	-	51	74.336	Oryctolagus_cuniculus
ENSSMAG00000005854	srsf2a	53	96.429	ENSOMEG00000007583	srsf2a	51	93.333	Oryzias_melastigma
ENSSMAG00000005854	srsf2a	52	92.793	ENSPKIG00000023128	-	52	89.167	Paramormyrops_kingsleyae
ENSSMAG00000005854	srsf2a	50	93.578	ENSPMGG00000010911	srsf2a	55	93.860	Periophthalmus_magnuspinnatus
ENSSMAG00000005854	srsf2a	81	69.364	ENSPMGG00000006860	-	70	87.179	Periophthalmus_magnuspinnatus
ENSSMAG00000005854	srsf2a	67	64.626	ENSPPYG00000003786	-	55	68.595	Pongo_abelii
ENSSMAG00000005854	srsf2a	77	72.393	ENSSFOG00015003975	-	58	74.839	Scleropages_formosus
ENSSMAG00000005854	srsf2a	55	98.291	ENSSDUG00000013865	srsf2a	52	98.291	Seriola_dumerili
ENSSMAG00000005854	srsf2a	55	98.291	ENSSLDG00000017717	srsf2a	52	98.291	Seriola_lalandi_dorsalis
ENSSMAG00000005854	srsf2a	64	64.964	ENSSSCG00000012212	-	54	71.028	Sus_scrofa
ENSSMAG00000005854	srsf2a	52	93.636	ENSTGUG00000007799	-	55	88.525	Taeniopygia_guttata
ENSSMAG00000005854	srsf2a	61	80.620	ENSTRUG00000024363	srsf2b	51	87.826	Takifugu_rubripes
ENSSMAG00000005854	srsf2a	53	98.214	ENSTNIG00000001280	srsf2a	50	98.214	Tetraodon_nigroviridis
ENSSMAG00000005854	srsf2a	52	93.694	ENSXETG00000025271	srsf2	50	93.694	Xenopus_tropicalis
ENSSMAG00000005854	srsf2a	53	99.107	ENSXCOG00000005917	srsf2a	55	95.833	Xiphophorus_couchianus