EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000006125 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6326 bases
Position: chr19:15342240-15348565
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000009952	MMR_HSR1	PF01926.23	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000010078	-	3021	-	ENSSMAP00000009952	180 (aa)	-	A0A2U9CXH5

Gene Model

Click here to download ENSSMAG00000006125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006125's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000006125	-	63	30.081	ENSSMAG00000017528	rab1ab	58	30.081
ENSSMAG00000006125	-	94	49.123	ENSSMAG00000017643	arl2	92	49.123
ENSSMAG00000006125	-	96	33.526	ENSSMAG00000015087	arl8a	93	33.526
ENSSMAG00000006125	-	63	30.081	ENSSMAG00000009201	rab1ba	58	30.081
ENSSMAG00000006125	-	96	38.144	ENSSMAG00000007588	-	95	38.144
ENSSMAG00000006125	-	94	50.581	ENSSMAG00000012843	-	81	50.581
ENSSMAG00000006125	-	94	48.295	ENSSMAG00000015059	arl4aa	87	48.295
ENSSMAG00000006125	-	100	33.149	ENSSMAG00000015130	arl8bb	97	33.149
ENSSMAG00000006125	-	98	81.250	ENSSMAG00000018796	-	98	81.250
ENSSMAG00000006125	-	95	80.702	ENSSMAG00000011361	arf5	98	79.375
ENSSMAG00000006125	-	63	30.081	ENSSMAG00000021049	-	58	30.081
ENSSMAG00000006125	-	93	47.126	ENSSMAG00000013072	-	90	47.126
ENSSMAG00000006125	-	100	87.293	ENSSMAG00000001861	arf3b	100	87.293
ENSSMAG00000006125	-	100	41.398	ENSSMAG00000021333	ARL6	99	41.398
ENSSMAG00000006125	-	99	58.659	ENSSMAG00000016416	arl1	99	58.659
ENSSMAG00000006125	-	98	45.652	ENSSMAG00000017183	-	92	45.652
ENSSMAG00000006125	-	100	87.293	ENSSMAG00000002927	-	100	87.293
ENSSMAG00000006125	-	100	87.293	ENSSMAG00000010770	arf2b	100	87.293
ENSSMAG00000006125	-	98	58.173	ENSSMAG00000002487	-	99	58.173
ENSSMAG00000006125	-	94	33.149	ENSSMAG00000002165	-	91	33.149
ENSSMAG00000006125	-	98	46.591	ENSSMAG00000010552	arl5c	98	46.591
ENSSMAG00000006125	-	98	81.921	ENSSMAG00000004541	-	98	81.921
ENSSMAG00000006125	-	94	44.633	ENSSMAG00000014218	-	85	44.633
ENSSMAG00000006125	-	98	50.282	ENSSMAG00000006539	arl5a	99	50.282
ENSSMAG00000006125	-	56	33.663	ENSSMAG00000020758	sar1ab	72	33.663
ENSSMAG00000006125	-	97	48.000	ENSSMAG00000011578	arl8	98	48.000
ENSSMAG00000006125	-	92	46.386	ENSSMAG00000005803	arl3	91	46.386
ENSSMAG00000006125	-	93	47.399	ENSSMAG00000016399	arl4cb	90	47.399
ENSSMAG00000006125	-	100	33.149	ENSSMAG00000016740	arl8ba	97	33.149
ENSSMAG00000006125	-	94	45.714	ENSSMAG00000008394	arl4d	85	45.714
ENSSMAG00000006125	-	96	37.097	ENSSMAG00000001351	arfrp1	81	37.097
ENSSMAG00000006125	-	98	43.017	ENSSMAG00000003002	arl3l2	90	43.017
ENSSMAG00000006125	-	83	68.667	ENSSMAG00000006815	ARF6	99	68.667
ENSSMAG00000006125	-	90	45.399	ENSSMAG00000000005	arl11	94	45.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006125	-	100	90.556	ENSACIG00000012192	-	100	90.556	Amphilophus_citrinellus
ENSSMAG00000006125	-	83	90.667	ENSAOCG00000001275	-	88	90.667	Amphiprion_ocellaris
ENSSMAG00000006125	-	100	91.111	ENSAPEG00000016909	-	100	91.111	Amphiprion_percula
ENSSMAG00000006125	-	100	91.667	ENSATEG00000003174	-	100	91.667	Anabas_testudineus
ENSSMAG00000006125	-	100	89.444	ENSACLG00000004123	-	100	89.444	Astatotilapia_calliptera
ENSSMAG00000006125	-	100	86.667	ENSAMXG00000019845	arf1	100	86.667	Astyanax_mexicanus
ENSSMAG00000006125	-	100	91.111	ENSCVAG00000013374	-	100	91.111	Cyprinodon_variegatus
ENSSMAG00000006125	-	100	86.667	ENSDARG00000009484	arf1	100	86.667	Danio_rerio
ENSSMAG00000006125	-	100	86.667	ENSELUG00000022533	arf1	79	86.667	Esox_lucius
ENSSMAG00000006125	-	100	90.556	ENSFHEG00000005859	-	100	90.556	Fundulus_heteroclitus
ENSSMAG00000006125	-	96	84.393	ENSGMOG00000000429	arf1	95	84.393	Gadus_morhua
ENSSMAG00000006125	-	100	91.111	ENSGAFG00000018151	-	100	91.111	Gambusia_affinis
ENSSMAG00000006125	-	100	83.333	ENSGACG00000014195	-	97	83.333	Gasterosteus_aculeatus
ENSSMAG00000006125	-	100	89.444	ENSHBUG00000002636	-	100	89.444	Haplochromis_burtoni
ENSSMAG00000006125	-	100	86.111	ENSIPUG00000006311	arf1	100	86.111	Ictalurus_punctatus
ENSSMAG00000006125	-	100	90.000	ENSKMAG00000018315	-	100	90.000	Kryptolebias_marmoratus
ENSSMAG00000006125	-	99	86.592	ENSLBEG00000001998	arf1	99	86.592	Labrus_bergylta
ENSSMAG00000006125	-	99	87.079	ENSLBEG00000023263	-	98	87.079	Labrus_bergylta
ENSSMAG00000006125	-	100	91.667	ENSMAMG00000001553	-	100	91.667	Mastacembelus_armatus
ENSSMAG00000006125	-	100	89.444	ENSMZEG00005022594	-	100	89.444	Maylandia_zebra
ENSSMAG00000006125	-	100	92.222	ENSMALG00000004269	-	100	92.222	Monopterus_albus
ENSSMAG00000006125	-	100	89.444	ENSNBRG00000016455	-	100	89.444	Neolamprologus_brichardi
ENSSMAG00000006125	-	100	89.444	ENSONIG00000001286	-	100	89.444	Oreochromis_niloticus
ENSSMAG00000006125	-	100	90.556	ENSORLG00000023270	-	100	90.556	Oryzias_latipes
ENSSMAG00000006125	-	100	90.000	ENSORLG00020006712	-	100	90.000	Oryzias_latipes_hni
ENSSMAG00000006125	-	100	90.556	ENSORLG00015019836	-	100	90.556	Oryzias_latipes_hsok
ENSSMAG00000006125	-	100	90.556	ENSOMEG00000023784	-	100	90.556	Oryzias_melastigma
ENSSMAG00000006125	-	100	85.556	ENSPMGG00000014174	arf1	98	89.412	Periophthalmus_magnuspinnatus
ENSSMAG00000006125	-	100	89.444	ENSPMAG00000002035	arf1	100	89.444	Petromyzon_marinus
ENSSMAG00000006125	-	100	91.111	ENSPFOG00000014787	-	100	91.111	Poecilia_formosa
ENSSMAG00000006125	-	100	91.111	ENSPLAG00000001041	-	100	91.111	Poecilia_latipinna
ENSSMAG00000006125	-	100	91.111	ENSPMEG00000024077	-	100	91.111	Poecilia_mexicana
ENSSMAG00000006125	-	100	91.111	ENSPREG00000009009	-	100	91.111	Poecilia_reticulata
ENSSMAG00000006125	-	100	89.444	ENSPNYG00000009472	-	100	89.444	Pundamilia_nyererei
ENSSMAG00000006125	-	94	91.124	ENSPNAG00000000098	arf1	93	91.124	Pygocentrus_nattereri
ENSSMAG00000006125	-	99	75.556	YDL192W	-	99	75.556	Saccharomyces_cerevisiae
ENSSMAG00000006125	-	99	75.978	YDL137W	-	99	75.978	Saccharomyces_cerevisiae
ENSSMAG00000006125	-	100	91.111	ENSSDUG00000017356	-	100	91.111	Seriola_dumerili
ENSSMAG00000006125	-	100	91.111	ENSSLDG00000008504	-	100	91.111	Seriola_lalandi_dorsalis
ENSSMAG00000006125	-	100	91.667	ENSSPAG00000011431	-	100	91.667	Stegastes_partitus
ENSSMAG00000006125	-	100	89.444	ENSTRUG00000019870	-	100	89.444	Takifugu_rubripes
ENSSMAG00000006125	-	100	88.333	ENSTNIG00000011685	-	100	88.333	Tetraodon_nigroviridis
ENSSMAG00000006125	-	100	91.111	ENSXCOG00000016687	-	98	91.111	Xiphophorus_couchianus
ENSSMAG00000006125	-	100	91.111	ENSXMAG00000009193	-	100	91.111	Xiphophorus_maculatus