EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000006241 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: si:ch211-212k18.5
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 5483 bases
Position: chr2:3763930-3769412
Accession: ZDB-GENE-030131-379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000010169	zf-C2H2	PF00096.26	3.2e-18	1	2
ENSSMAP00000010169	zf-C2H2	PF00096.26	3.2e-18	2	2
ENSSMAP00000010169	zf-met	PF12874.7	7.2e-07	1	2
ENSSMAP00000010169	zf-met	PF12874.7	7.2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000010300	-	3573	-	ENSSMAP00000010169	1190 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000006241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006241	si:ch211-212k18.5	100	77.147	ENSAPOG00000013387	si:ch211-212k18.5	100	78.849	Acanthochromis_polyacanthus
ENSSMAG00000006241	si:ch211-212k18.5	79	79.959	ENSACIG00000019922	si:ch211-212k18.5	99	81.493	Amphilophus_citrinellus
ENSSMAG00000006241	si:ch211-212k18.5	100	79.519	ENSAOCG00000010737	si:ch211-212k18.5	100	80.100	Amphiprion_ocellaris
ENSSMAG00000006241	si:ch211-212k18.5	100	79.353	ENSAPEG00000006751	si:ch211-212k18.5	100	79.934	Amphiprion_percula
ENSSMAG00000006241	si:ch211-212k18.5	76	81.350	ENSATEG00000001254	si:ch211-212k18.5	100	82.380	Anabas_testudineus
ENSSMAG00000006241	si:ch211-212k18.5	100	74.134	ENSACLG00000009709	si:ch211-212k18.5	100	74.778	Astatotilapia_calliptera
ENSSMAG00000006241	si:ch211-212k18.5	78	38.676	ENSACLG00000019867	sall2	88	38.302	Astatotilapia_calliptera
ENSSMAG00000006241	si:ch211-212k18.5	99	56.219	ENSAMXG00000010979	si:ch211-212k18.5	99	56.469	Astyanax_mexicanus
ENSSMAG00000006241	si:ch211-212k18.5	78	37.511	ENSCSEG00000021148	sall2	68	38.143	Cynoglossus_semilaevis
ENSSMAG00000006241	si:ch211-212k18.5	99	73.441	ENSCSEG00000004426	si:ch211-212k18.5	99	73.582	Cynoglossus_semilaevis
ENSSMAG00000006241	si:ch211-212k18.5	99	69.431	ENSCVAG00000007475	si:ch211-212k18.5	99	70.000	Cyprinodon_variegatus
ENSSMAG00000006241	si:ch211-212k18.5	98	55.307	ENSDARG00000103316	si:ch211-212k18.5	98	54.305	Danio_rerio
ENSSMAG00000006241	si:ch211-212k18.5	57	50.909	ENSDARG00000075116	sall2	62	57.778	Danio_rerio
ENSSMAG00000006241	si:ch211-212k18.5	99	57.154	ENSELUG00000024534	si:ch211-212k18.5	99	56.064	Esox_lucius
ENSSMAG00000006241	si:ch211-212k18.5	52	45.059	ENSFHEG00000017550	sall2	59	44.788	Fundulus_heteroclitus
ENSSMAG00000006241	si:ch211-212k18.5	99	71.417	ENSFHEG00000017264	si:ch211-212k18.5	99	71.254	Fundulus_heteroclitus
ENSSMAG00000006241	si:ch211-212k18.5	99	70.041	ENSGAFG00000003746	si:ch211-212k18.5	100	70.732	Gambusia_affinis
ENSSMAG00000006241	si:ch211-212k18.5	100	74.134	ENSHBUG00000019672	si:ch211-212k18.5	100	74.778	Haplochromis_burtoni
ENSSMAG00000006241	si:ch211-212k18.5	95	37.710	ENSHBUG00000002882	sall2	93	37.537	Haplochromis_burtoni
ENSSMAG00000006241	si:ch211-212k18.5	97	62.650	ENSHCOG00000002842	si:ch211-212k18.5	99	62.211	Hippocampus_comes
ENSSMAG00000006241	si:ch211-212k18.5	99	53.922	ENSIPUG00000002559	sall2	99	53.834	Ictalurus_punctatus
ENSSMAG00000006241	si:ch211-212k18.5	99	70.065	ENSKMAG00000019657	si:ch211-212k18.5	100	70.113	Kryptolebias_marmoratus
ENSSMAG00000006241	si:ch211-212k18.5	100	74.673	ENSLBEG00000020887	si:ch211-212k18.5	100	75.000	Labrus_bergylta
ENSSMAG00000006241	si:ch211-212k18.5	52	45.619	ENSMAMG00000016229	sall2	59	41.952	Mastacembelus_armatus
ENSSMAG00000006241	si:ch211-212k18.5	68	85.681	ENSMAMG00000015887	si:ch211-212k18.5	99	85.329	Mastacembelus_armatus
ENSSMAG00000006241	si:ch211-212k18.5	100	74.134	ENSMZEG00005021214	si:ch211-212k18.5	100	74.778	Maylandia_zebra
ENSSMAG00000006241	si:ch211-212k18.5	95	37.710	ENSMZEG00005012103	sall2	93	37.537	Maylandia_zebra
ENSSMAG00000006241	si:ch211-212k18.5	93	81.109	ENSMMOG00000012726	si:ch211-212k18.5	100	81.109	Mola_mola
ENSSMAG00000006241	si:ch211-212k18.5	92	77.535	ENSMALG00000000979	si:ch211-212k18.5	97	78.709	Monopterus_albus
ENSSMAG00000006241	si:ch211-212k18.5	94	74.074	ENSNBRG00000023948	si:ch211-212k18.5	96	74.956	Neolamprologus_brichardi
ENSSMAG00000006241	si:ch211-212k18.5	94	39.798	ENSNBRG00000017645	sall2	99	39.932	Neolamprologus_brichardi
ENSSMAG00000006241	si:ch211-212k18.5	100	68.160	ENSORLG00000030429	si:ch211-212k18.5	100	68.348	Oryzias_latipes
ENSSMAG00000006241	si:ch211-212k18.5	100	68.078	ENSORLG00020008145	si:ch211-212k18.5	100	68.374	Oryzias_latipes_hni
ENSSMAG00000006241	si:ch211-212k18.5	73	43.116	ENSORLG00020007873	sall2	84	50.000	Oryzias_latipes_hni
ENSSMAG00000006241	si:ch211-212k18.5	100	67.834	ENSORLG00015004982	si:ch211-212k18.5	100	68.130	Oryzias_latipes_hsok
ENSSMAG00000006241	si:ch211-212k18.5	60	60.465	ENSORLG00015002422	sall2	84	50.000	Oryzias_latipes_hsok
ENSSMAG00000006241	si:ch211-212k18.5	100	67.397	ENSOMEG00000013949	si:ch211-212k18.5	100	67.828	Oryzias_melastigma
ENSSMAG00000006241	si:ch211-212k18.5	94	64.665	ENSPMGG00000018714	si:ch211-212k18.5	99	64.261	Periophthalmus_magnuspinnatus
ENSSMAG00000006241	si:ch211-212k18.5	99	71.261	ENSPFOG00000023705	si:ch211-212k18.5	99	73.050	Poecilia_formosa
ENSSMAG00000006241	si:ch211-212k18.5	99	71.546	ENSPLAG00000002577	si:ch211-212k18.5	100	71.672	Poecilia_latipinna
ENSSMAG00000006241	si:ch211-212k18.5	99	70.923	ENSPMEG00000016395	si:ch211-212k18.5	99	72.877	Poecilia_mexicana
ENSSMAG00000006241	si:ch211-212k18.5	66	47.826	ENSPREG00000021908	sall2	72	47.826	Poecilia_reticulata
ENSSMAG00000006241	si:ch211-212k18.5	99	70.488	ENSPREG00000005292	si:ch211-212k18.5	100	70.837	Poecilia_reticulata
ENSSMAG00000006241	si:ch211-212k18.5	100	73.906	ENSPNYG00000021576	si:ch211-212k18.5	100	74.566	Pundamilia_nyererei
ENSSMAG00000006241	si:ch211-212k18.5	99	56.525	ENSPNAG00000006123	si:ch211-212k18.5	99	56.494	Pygocentrus_nattereri
ENSSMAG00000006241	si:ch211-212k18.5	82	39.310	ENSPNAG00000021463	sall2	76	40.816	Pygocentrus_nattereri
ENSSMAG00000006241	si:ch211-212k18.5	69	43.273	ENSSDUG00000012274	sall2	94	38.568	Seriola_dumerili
ENSSMAG00000006241	si:ch211-212k18.5	100	85.596	ENSSDUG00000006164	si:ch211-212k18.5	100	85.430	Seriola_dumerili
ENSSMAG00000006241	si:ch211-212k18.5	69	44.000	ENSSLDG00000001653	sall2	94	38.078	Seriola_lalandi_dorsalis
ENSSMAG00000006241	si:ch211-212k18.5	100	86.175	ENSSLDG00000003393	si:ch211-212k18.5	100	86.010	Seriola_lalandi_dorsalis
ENSSMAG00000006241	si:ch211-212k18.5	52	46.013	ENSSPAG00000023009	sall2	67	43.838	Stegastes_partitus
ENSSMAG00000006241	si:ch211-212k18.5	94	80.124	ENSSPAG00000013435	si:ch211-212k18.5	97	81.272	Stegastes_partitus
ENSSMAG00000006241	si:ch211-212k18.5	92	73.956	ENSTRUG00000025082	si:ch211-212k18.5	95	73.077	Takifugu_rubripes
ENSSMAG00000006241	si:ch211-212k18.5	99	71.477	ENSXCOG00000000762	si:ch211-212k18.5	100	71.440	Xiphophorus_couchianus
ENSSMAG00000006241	si:ch211-212k18.5	99	70.066	ENSXMAG00000001461	si:ch211-212k18.5	100	70.455	Xiphophorus_maculatus
ENSSMAG00000006241	si:ch211-212k18.5	62	46.377	ENSXMAG00000000902	sall2	69	46.377	Xiphophorus_maculatus