EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000006340 (Gene tree)
Gene ID: -
Gene Symbol: mrpl40
Alias: fj54c06|wu:fj54c06|zgc:103495
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 1677 bases
Position: chr9:18437930-18439606
Accession: ZDB-GENE-040912-37
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000010303	MRP-L28	PF09812.9	2.5e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000010436	-	615	-	ENSSMAP00000010303	204 (aa)	-	A0A2U9BUU4

Gene Model

Click here to download ENSSMAG00000006340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006340	mrpl40	92	51.323	ENSG00000185608	MRPL40	88	52.381	Homo_sapiens
ENSSMAG00000006340	mrpl40	100	75.490	ENSAPOG00000021291	mrpl40	100	75.490	Acanthochromis_polyacanthus
ENSSMAG00000006340	mrpl40	82	54.167	ENSAMEG00000011421	MRPL40	82	54.167	Ailuropoda_melanoleuca
ENSSMAG00000006340	mrpl40	100	63.235	ENSACIG00000006717	MRPL40	96	62.745	Amphilophus_citrinellus
ENSSMAG00000006340	mrpl40	100	74.510	ENSACIG00000006672	mrpl40	100	74.510	Amphilophus_citrinellus
ENSSMAG00000006340	mrpl40	100	76.471	ENSAOCG00000003216	mrpl40	100	76.471	Amphiprion_ocellaris
ENSSMAG00000006340	mrpl40	100	76.961	ENSAPEG00000017401	mrpl40	100	76.961	Amphiprion_percula
ENSSMAG00000006340	mrpl40	75	77.922	ENSATEG00000020753	mrpl40	91	77.922	Anabas_testudineus
ENSSMAG00000006340	mrpl40	87	54.444	ENSAPLG00000004002	MRPL40	90	54.444	Anas_platyrhynchos
ENSSMAG00000006340	mrpl40	97	52.792	ENSACAG00000001053	MRPL40	98	52.792	Anolis_carolinensis
ENSSMAG00000006340	mrpl40	82	53.571	ENSANAG00000026579	MRPL40	88	50.794	Aotus_nancymaae
ENSSMAG00000006340	mrpl40	100	78.922	ENSACLG00000011106	mrpl40	100	78.922	Astatotilapia_calliptera
ENSSMAG00000006340	mrpl40	100	61.722	ENSAMXG00000029691	mrpl40	100	61.722	Astyanax_mexicanus
ENSSMAG00000006340	mrpl40	91	48.387	ENSBTAG00000019891	MRPL40	90	49.462	Bos_taurus
ENSSMAG00000006340	mrpl40	73	36.774	WBGene00018793	mrpl-40	62	36.441	Caenorhabditis_elegans
ENSSMAG00000006340	mrpl40	82	54.762	ENSCJAG00000001584	MRPL40	87	51.852	Callithrix_jacchus
ENSSMAG00000006340	mrpl40	82	54.167	ENSCAFG00020007995	MRPL40	82	55.357	Canis_lupus_dingo
ENSSMAG00000006340	mrpl40	91	49.462	ENSCHIG00000000131	-	90	49.462	Capra_hircus
ENSSMAG00000006340	mrpl40	67	48.175	ENSCHIG00000026872	-	80	48.175	Capra_hircus
ENSSMAG00000006340	mrpl40	94	51.295	ENSTSYG00000014747	MRPL40	91	53.804	Carlito_syrichta
ENSSMAG00000006340	mrpl40	68	58.696	ENSCAPG00000012876	MRPL40	85	60.331	Cavia_aperea
ENSSMAG00000006340	mrpl40	69	58.571	ENSCPOG00000026802	MRPL40	82	55.952	Cavia_porcellus
ENSSMAG00000006340	mrpl40	98	46.500	ENSCCAG00000037694	MRPL40	100	47.500	Cebus_capucinus
ENSSMAG00000006340	mrpl40	92	49.206	ENSCATG00000043592	-	89	50.265	Cercocebus_atys
ENSSMAG00000006340	mrpl40	82	53.571	ENSCATG00000031418	-	90	51.075	Cercocebus_atys
ENSSMAG00000006340	mrpl40	82	53.571	ENSCLAG00000016629	MRPL40	98	49.756	Chinchilla_lanigera
ENSSMAG00000006340	mrpl40	82	54.167	ENSCSAG00000011593	MRPL40	82	55.357	Chlorocebus_sabaeus
ENSSMAG00000006340	mrpl40	82	50.595	ENSCHOG00000008751	MRPL40	94	51.786	Choloepus_hoffmanni
ENSSMAG00000006340	mrpl40	97	50.254	ENSCPBG00000010618	MRPL40	99	50.254	Chrysemys_picta_bellii
ENSSMAG00000006340	mrpl40	62	39.370	ENSCSAVG00000001505	-	54	39.091	Ciona_savignyi
ENSSMAG00000006340	mrpl40	92	50.265	ENSCANG00000038600	MRPL40	96	51.323	Colobus_angolensis_palliatus
ENSSMAG00000006340	mrpl40	100	45.854	ENSCGRG00001019957	Mrpl40	98	45.854	Cricetulus_griseus_chok1gshd
ENSSMAG00000006340	mrpl40	100	45.854	ENSCGRG00000001245	Mrpl40	98	45.854	Cricetulus_griseus_crigri
ENSSMAG00000006340	mrpl40	100	75.980	ENSCSEG00000019750	mrpl40	100	75.980	Cynoglossus_semilaevis
ENSSMAG00000006340	mrpl40	80	54.438	ENSCSEG00000012296	-	93	54.438	Cynoglossus_semilaevis
ENSSMAG00000006340	mrpl40	100	75.490	ENSCVAG00000018229	mrpl40	100	75.490	Cyprinodon_variegatus
ENSSMAG00000006340	mrpl40	98	55.825	ENSDARG00000043554	mrpl40	100	56.796	Danio_rerio
ENSSMAG00000006340	mrpl40	69	54.286	ENSDNOG00000038360	-	93	44.500	Dasypus_novemcinctus
ENSSMAG00000006340	mrpl40	100	47.805	ENSDORG00000002949	Mrpl40	98	49.268	Dipodomys_ordii
ENSSMAG00000006340	mrpl40	75	39.375	FBgn0037892	mRpL40	82	40.000	Drosophila_melanogaster
ENSSMAG00000006340	mrpl40	82	52.976	ENSEASG00005010493	MRPL40	82	54.167	Equus_asinus_asinus
ENSSMAG00000006340	mrpl40	78	54.375	ENSECAG00000009876	MRPL40	96	55.625	Equus_caballus
ENSSMAG00000006340	mrpl40	100	47.368	ENSEEUG00000009268	MRPL40	97	47.368	Erinaceus_europaeus
ENSSMAG00000006340	mrpl40	100	73.171	ENSELUG00000009281	mrpl40	100	73.171	Esox_lucius
ENSSMAG00000006340	mrpl40	96	47.959	ENSFCAG00000002752	MRPL40	95	48.980	Felis_catus
ENSSMAG00000006340	mrpl40	83	54.438	ENSFALG00000007981	MRPL40	85	54.438	Ficedula_albicollis
ENSSMAG00000006340	mrpl40	76	56.051	ENSFDAG00000020940	MRPL40	97	56.051	Fukomys_damarensis
ENSSMAG00000006340	mrpl40	95	52.308	ENSGALG00000053063	MRPL40	64	52.308	Gallus_gallus
ENSSMAG00000006340	mrpl40	100	71.569	ENSGAFG00000000522	mrpl40	100	71.569	Gambusia_affinis
ENSSMAG00000006340	mrpl40	83	56.213	ENSGAGG00000020728	MRPL40	93	52.604	Gopherus_agassizii
ENSSMAG00000006340	mrpl40	92	51.323	ENSGGOG00000012336	MRPL40	88	52.381	Gorilla_gorilla
ENSSMAG00000006340	mrpl40	100	78.922	ENSHBUG00000000404	mrpl40	100	78.922	Haplochromis_burtoni
ENSSMAG00000006340	mrpl40	76	57.962	ENSHGLG00000018525	MRPL40	97	57.962	Heterocephalus_glaber_female
ENSSMAG00000006340	mrpl40	98	49.254	ENSHGLG00100009563	MRPL40	98	49.254	Heterocephalus_glaber_male
ENSSMAG00000006340	mrpl40	100	68.137	ENSHCOG00000005731	mrpl40	100	68.137	Hippocampus_comes
ENSSMAG00000006340	mrpl40	100	59.048	ENSIPUG00000020288	Mrpl40	99	59.048	Ictalurus_punctatus
ENSSMAG00000006340	mrpl40	82	51.786	ENSSTOG00000002887	MRPL40	82	52.976	Ictidomys_tridecemlineatus
ENSSMAG00000006340	mrpl40	99	48.276	ENSJJAG00000017905	Mrpl40	95	49.261	Jaculus_jaculus
ENSSMAG00000006340	mrpl40	100	69.118	ENSKMAG00000003717	mrpl40	100	69.118	Kryptolebias_marmoratus
ENSSMAG00000006340	mrpl40	100	68.137	ENSLBEG00000025203	mrpl40	100	68.137	Labrus_bergylta
ENSSMAG00000006340	mrpl40	84	58.382	ENSLACG00000015070	MRPL40	85	58.382	Latimeria_chalumnae
ENSSMAG00000006340	mrpl40	99	62.871	ENSLOCG00000001879	mrpl40	99	62.871	Lepisosteus_oculatus
ENSSMAG00000006340	mrpl40	82	53.571	ENSLAFG00000011061	MRPL40	82	53.571	Loxodonta_africana
ENSSMAG00000006340	mrpl40	82	53.571	ENSMFAG00000032018	-	90	51.075	Macaca_fascicularis
ENSSMAG00000006340	mrpl40	91	48.387	ENSMFAG00000039890	-	96	52.778	Macaca_fascicularis
ENSSMAG00000006340	mrpl40	92	48.148	ENSMFAG00000001495	-	89	49.206	Macaca_fascicularis
ENSSMAG00000006340	mrpl40	92	48.148	ENSMMUG00000030886	-	88	49.206	Macaca_mulatta
ENSSMAG00000006340	mrpl40	77	53.797	ENSMMUG00000006218	-	88	55.063	Macaca_mulatta
ENSSMAG00000006340	mrpl40	82	52.381	ENSMNEG00000034050	-	90	50.000	Macaca_nemestrina
ENSSMAG00000006340	mrpl40	92	49.206	ENSMNEG00000041171	-	91	50.265	Macaca_nemestrina
ENSSMAG00000006340	mrpl40	91	47.568	ENSMNEG00000040492	-	96	50.549	Macaca_nemestrina
ENSSMAG00000006340	mrpl40	92	50.265	ENSMLEG00000030926	-	96	51.323	Mandrillus_leucophaeus
ENSSMAG00000006340	mrpl40	92	51.323	ENSMLEG00000032552	-	89	51.323	Mandrillus_leucophaeus
ENSSMAG00000006340	mrpl40	91	47.312	ENSMLEG00000009022	-	96	51.667	Mandrillus_leucophaeus
ENSSMAG00000006340	mrpl40	100	76.471	ENSMAMG00000014249	mrpl40	100	76.471	Mastacembelus_armatus
ENSSMAG00000006340	mrpl40	100	78.922	ENSMZEG00005009853	mrpl40	100	78.922	Maylandia_zebra
ENSSMAG00000006340	mrpl40	76	58.710	ENSMGAG00000001177	MRPL40	100	58.710	Meleagris_gallopavo
ENSSMAG00000006340	mrpl40	100	46.829	ENSMAUG00000015350	Mrpl40	98	46.829	Mesocricetus_auratus
ENSSMAG00000006340	mrpl40	100	46.890	ENSMICG00000046066	MRPL40	98	47.847	Microcebus_murinus
ENSSMAG00000006340	mrpl40	82	51.786	ENSMOCG00000016970	Mrpl40	82	52.976	Microtus_ochrogaster
ENSSMAG00000006340	mrpl40	75	82.468	ENSMMOG00000012861	mrpl40	84	82.468	Mola_mola
ENSSMAG00000006340	mrpl40	83	51.176	ENSMODG00000010070	MRPL40	93	51.176	Monodelphis_domestica
ENSSMAG00000006340	mrpl40	100	76.961	ENSMALG00000020778	mrpl40	100	76.961	Monopterus_albus
ENSSMAG00000006340	mrpl40	100	46.411	MGP_CAROLIEiJ_G0020557	Mrpl40	97	56.051	Mus_caroli
ENSSMAG00000006340	mrpl40	100	46.890	ENSMUSG00000022706	Mrpl40	97	56.688	Mus_musculus
ENSSMAG00000006340	mrpl40	100	47.368	MGP_PahariEiJ_G0016262	Mrpl40	97	56.688	Mus_pahari
ENSSMAG00000006340	mrpl40	82	54.167	MGP_SPRETEiJ_G0021452	Mrpl40	97	56.688	Mus_spretus
ENSSMAG00000006340	mrpl40	82	50.595	ENSMPUG00000003865	MRPL40	98	45.933	Mustela_putorius_furo
ENSSMAG00000006340	mrpl40	82	52.976	ENSMLUG00000002456	-	82	54.167	Myotis_lucifugus
ENSSMAG00000006340	mrpl40	82	52.976	ENSMLUG00000024620	-	82	54.167	Myotis_lucifugus
ENSSMAG00000006340	mrpl40	82	54.167	ENSNGAG00000000304	Mrpl40	83	55.357	Nannospalax_galili
ENSSMAG00000006340	mrpl40	69	58.571	ENSNLEG00000005372	MRPL40	94	49.505	Nomascus_leucogenys
ENSSMAG00000006340	mrpl40	50	51.961	ENSMEUG00000003868	-	69	51.961	Notamacropus_eugenii
ENSSMAG00000006340	mrpl40	82	53.571	ENSODEG00000017051	MRPL40	77	57.595	Octodon_degus
ENSSMAG00000006340	mrpl40	100	78.431	ENSONIG00000014393	mrpl40	100	78.431	Oreochromis_niloticus
ENSSMAG00000006340	mrpl40	77	58.228	ENSOCUG00000009859	MRPL40	57	59.494	Oryctolagus_cuniculus
ENSSMAG00000006340	mrpl40	100	72.549	ENSORLG00000002574	mrpl40	100	72.549	Oryzias_latipes
ENSSMAG00000006340	mrpl40	100	74.020	ENSORLG00020005727	mrpl40	100	74.020	Oryzias_latipes_hni
ENSSMAG00000006340	mrpl40	100	73.039	ENSORLG00015015422	mrpl40	100	73.039	Oryzias_latipes_hsok
ENSSMAG00000006340	mrpl40	100	72.059	ENSOMEG00000017632	mrpl40	100	72.059	Oryzias_melastigma
ENSSMAG00000006340	mrpl40	82	54.762	ENSOGAG00000030071	MRPL40	89	55.952	Otolemur_garnettii
ENSSMAG00000006340	mrpl40	91	48.387	ENSOARG00000017561	MRPL40	90	49.462	Ovis_aries
ENSSMAG00000006340	mrpl40	82	55.357	ENSPPAG00000030349	MRPL40	82	56.548	Pan_paniscus
ENSSMAG00000006340	mrpl40	82	51.786	ENSPPRG00000004672	MRPL40	98	48.293	Panthera_pardus
ENSSMAG00000006340	mrpl40	82	51.786	ENSPTIG00000003393	MRPL40	88	49.206	Panthera_tigris_altaica
ENSSMAG00000006340	mrpl40	82	55.357	ENSPTRG00000014061	MRPL40	82	56.548	Pan_troglodytes
ENSSMAG00000006340	mrpl40	92	49.735	ENSPANG00000000595	-	89	50.794	Papio_anubis
ENSSMAG00000006340	mrpl40	82	53.571	ENSPANG00000007370	-	90	51.075	Papio_anubis
ENSSMAG00000006340	mrpl40	100	56.585	ENSPKIG00000024494	mrpl40	100	56.585	Paramormyrops_kingsleyae
ENSSMAG00000006340	mrpl40	81	55.152	ENSPSIG00000003055	MRPL40	99	55.488	Pelodiscus_sinensis
ENSSMAG00000006340	mrpl40	100	64.216	ENSPMGG00000018388	mrpl40	100	64.216	Periophthalmus_magnuspinnatus
ENSSMAG00000006340	mrpl40	82	53.571	ENSPEMG00000017933	Mrpl40	82	54.762	Peromyscus_maniculatus_bairdii
ENSSMAG00000006340	mrpl40	97	42.929	ENSPCIG00000025479	MRPL40	93	42.929	Phascolarctos_cinereus
ENSSMAG00000006340	mrpl40	100	70.531	ENSPFOG00000012506	mrpl40	97	70.531	Poecilia_formosa
ENSSMAG00000006340	mrpl40	100	70.588	ENSPLAG00000017335	mrpl40	100	70.588	Poecilia_latipinna
ENSSMAG00000006340	mrpl40	100	72.059	ENSPMEG00000003881	mrpl40	100	72.059	Poecilia_mexicana
ENSSMAG00000006340	mrpl40	100	72.059	ENSPREG00000011448	mrpl40	100	72.059	Poecilia_reticulata
ENSSMAG00000006340	mrpl40	82	55.357	ENSPPYG00000011578	MRPL40	96	52.381	Pongo_abelii
ENSSMAG00000006340	mrpl40	64	54.615	ENSPCAG00000007834	MRPL40	59	57.025	Procavia_capensis
ENSSMAG00000006340	mrpl40	100	46.890	ENSPCOG00000014413	MRPL40	98	47.847	Propithecus_coquereli
ENSSMAG00000006340	mrpl40	100	78.922	ENSPNYG00000008216	mrpl40	100	78.922	Pundamilia_nyererei
ENSSMAG00000006340	mrpl40	100	61.765	ENSPNAG00000000310	mrpl40	99	68.182	Pygocentrus_nattereri
ENSSMAG00000006340	mrpl40	100	46.890	ENSRNOG00000049686	Mrpl40	98	46.890	Rattus_norvegicus
ENSSMAG00000006340	mrpl40	99	48.020	ENSRBIG00000023060	MRPL40	88	51.323	Rhinopithecus_bieti
ENSSMAG00000006340	mrpl40	99	47.030	ENSRROG00000043837	MRPL40	88	50.265	Rhinopithecus_roxellana
ENSSMAG00000006340	mrpl40	82	54.167	ENSSBOG00000031050	MRPL40	98	49.254	Saimiri_boliviensis_boliviensis
ENSSMAG00000006340	mrpl40	77	52.532	ENSSHAG00000010239	MRPL40	98	52.532	Sarcophilus_harrisii
ENSSMAG00000006340	mrpl40	96	56.853	ENSSFOG00015014220	mrpl40	98	56.853	Scleropages_formosus
ENSSMAG00000006340	mrpl40	100	77.451	ENSSDUG00000022994	mrpl40	100	77.451	Seriola_dumerili
ENSSMAG00000006340	mrpl40	100	76.961	ENSSLDG00000009671	mrpl40	100	76.961	Seriola_lalandi_dorsalis
ENSSMAG00000006340	mrpl40	82	53.571	ENSSARG00000003051	MRPL40	82	53.571	Sorex_araneus
ENSSMAG00000006340	mrpl40	83	56.471	ENSSPUG00000015559	MRPL40	85	57.059	Sphenodon_punctatus
ENSSMAG00000006340	mrpl40	100	77.451	ENSSPAG00000015481	mrpl40	100	77.451	Stegastes_partitus
ENSSMAG00000006340	mrpl40	94	47.917	ENSSSCG00000034014	MRPL40	93	48.958	Sus_scrofa
ENSSMAG00000006340	mrpl40	75	57.792	ENSTGUG00000008534	MRPL40	100	57.792	Taeniopygia_guttata
ENSSMAG00000006340	mrpl40	99	72.277	ENSTRUG00000025904	mrpl40	100	72.277	Takifugu_rubripes
ENSSMAG00000006340	mrpl40	90	50.270	ENSTTRG00000014932	MRPL40	91	50.270	Tursiops_truncatus
ENSSMAG00000006340	mrpl40	82	54.762	ENSUAMG00000007667	MRPL40	82	54.762	Ursus_americanus
ENSSMAG00000006340	mrpl40	76	51.923	ENSUMAG00000006804	MRPL40	82	51.923	Ursus_maritimus
ENSSMAG00000006340	mrpl40	99	40.686	ENSVVUG00000020719	-	93	40.686	Vulpes_vulpes
ENSSMAG00000006340	mrpl40	82	53.571	ENSVVUG00000025360	-	82	54.762	Vulpes_vulpes
ENSSMAG00000006340	mrpl40	84	57.310	ENSXETG00000018600	mrpl40	86	57.310	Xenopus_tropicalis
ENSSMAG00000006340	mrpl40	100	73.039	ENSXCOG00000002135	mrpl40	100	73.039	Xiphophorus_couchianus
ENSSMAG00000006340	mrpl40	100	72.549	ENSXMAG00000014595	mrpl40	100	72.549	Xiphophorus_maculatus