EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000006347 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 18516 bases
Position: chr17:1649167-1667682
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000010363	La	PF05383.17	3.9e-20	1	1
ENSSMAP00000010346	La	PF05383.17	4e-20	1	1
ENSSMAP00000010315	La	PF05383.17	4.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000010495	-	2965	-	ENSSMAP00000010363	954 (aa)	-	-
ENSSMAT00000010448	-	3139	-	ENSSMAP00000010315	1012 (aa)	-	-
ENSSMAT00000010479	-	3064	-	ENSSMAP00000010346	987 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000006347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000006347	larp1b	88	53.786	ENSSMAG00000007468	larp1	85	53.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006347	larp1b	94	55.087	ENSG00000138709	LARP1B	96	55.940	Homo_sapiens
ENSSMAG00000006347	larp1b	99	80.905	ENSAPOG00000020101	larp1b	89	82.080	Acanthochromis_polyacanthus
ENSSMAG00000006347	larp1b	58	50.592	ENSAMEG00000002748	LARP1B	99	50.508	Ailuropoda_melanoleuca
ENSSMAG00000006347	larp1b	95	78.758	ENSACIG00000023890	larp1b	81	81.279	Amphilophus_citrinellus
ENSSMAG00000006347	larp1b	84	78.431	ENSAOCG00000014268	larp1b	86	79.064	Amphiprion_ocellaris
ENSSMAG00000006347	larp1b	99	81.791	ENSAPEG00000004126	larp1b	85	84.865	Amphiprion_percula
ENSSMAG00000006347	larp1b	99	83.350	ENSATEG00000017849	larp1b	85	85.745	Anabas_testudineus
ENSSMAG00000006347	larp1b	91	53.739	ENSAPLG00000010129	LARP1B	99	53.362	Anas_platyrhynchos
ENSSMAG00000006347	larp1b	88	57.143	ENSACAG00000011338	LARP1B	88	57.475	Anolis_carolinensis
ENSSMAG00000006347	larp1b	67	52.758	ENSANAG00000034618	LARP1B	80	55.762	Aotus_nancymaae
ENSSMAG00000006347	larp1b	97	83.195	ENSACLG00000011948	larp1b	84	85.449	Astatotilapia_calliptera
ENSSMAG00000006347	larp1b	97	59.336	ENSAMXG00000006805	larp1b	82	62.914	Astyanax_mexicanus
ENSSMAG00000006347	larp1b	95	55.739	ENSBTAG00000012135	LARP1B	95	50.093	Bos_taurus
ENSSMAG00000006347	larp1b	92	54.952	ENSCJAG00000003338	LARP1B	99	56.492	Callithrix_jacchus
ENSSMAG00000006347	larp1b	93	55.450	ENSCAFG00000003831	LARP1B	99	57.159	Canis_familiaris
ENSSMAG00000006347	larp1b	93	55.438	ENSCAFG00020018899	LARP1B	95	56.736	Canis_lupus_dingo
ENSSMAG00000006347	larp1b	93	54.995	ENSCHIG00000023144	LARP1B	95	55.895	Capra_hircus
ENSSMAG00000006347	larp1b	91	55.485	ENSCCAG00000021948	LARP1B	97	55.832	Cebus_capucinus
ENSSMAG00000006347	larp1b	91	54.797	ENSCATG00000013541	LARP1B	96	55.135	Cercocebus_atys
ENSSMAG00000006347	larp1b	91	55.367	ENSCSAG00000003582	LARP1B	97	55.711	Chlorocebus_sabaeus
ENSSMAG00000006347	larp1b	93	50.463	ENSCHOG00000005354	LARP1B	96	51.441	Choloepus_hoffmanni
ENSSMAG00000006347	larp1b	93	55.415	ENSCPBG00000017480	LARP1B	85	56.030	Chrysemys_picta_bellii
ENSSMAG00000006347	larp1b	90	54.723	ENSCANG00000026958	LARP1B	96	55.066	Colobus_angolensis_palliatus
ENSSMAG00000006347	larp1b	99	80.444	ENSCSEG00000013519	larp1b	85	83.658	Cynoglossus_semilaevis
ENSSMAG00000006347	larp1b	93	79.303	ENSCVAG00000005046	larp1b	84	79.569	Cyprinodon_variegatus
ENSSMAG00000006347	larp1b	96	64.718	ENSDARG00000061169	larp1b	80	67.483	Danio_rerio
ENSSMAG00000006347	larp1b	54	50.362	ENSDNOG00000018765	-	98	50.362	Dasypus_novemcinctus
ENSSMAG00000006347	larp1b	81	53.936	ENSETEG00000012497	LARP1B	85	54.383	Echinops_telfairi
ENSSMAG00000006347	larp1b	90	46.091	ENSEBUG00000003668	larp1b	90	46.597	Eptatretus_burgeri
ENSSMAG00000006347	larp1b	91	55.567	ENSEASG00005018106	LARP1B	99	55.049	Equus_asinus_asinus
ENSSMAG00000006347	larp1b	92	56.720	ENSECAG00000001088	LARP1B	81	56.536	Equus_caballus
ENSSMAG00000006347	larp1b	72	60.924	ENSELUG00000023774	larp1b	83	63.956	Esox_lucius
ENSSMAG00000006347	larp1b	54	50.730	ENSFCAG00000014650	-	98	50.279	Felis_catus
ENSSMAG00000006347	larp1b	92	53.814	ENSFALG00000008098	LARP1B	96	54.516	Ficedula_albicollis
ENSSMAG00000006347	larp1b	96	80.105	ENSFHEG00000010264	larp1b	81	81.709	Fundulus_heteroclitus
ENSSMAG00000006347	larp1b	84	71.475	ENSGMOG00000005207	larp1b	74	76.753	Gadus_morhua
ENSSMAG00000006347	larp1b	94	53.742	ENSGALG00000010207	LARP1B	87	54.167	Gallus_gallus
ENSSMAG00000006347	larp1b	84	80.649	ENSGAFG00000012012	larp1b	93	81.296	Gambusia_affinis
ENSSMAG00000006347	larp1b	98	73.108	ENSGACG00000004609	larp1b	84	77.413	Gasterosteus_aculeatus
ENSSMAG00000006347	larp1b	93	55.661	ENSGAGG00000017209	LARP1B	85	56.197	Gopherus_agassizii
ENSSMAG00000006347	larp1b	92	55.053	ENSGGOG00000015900	LARP1B	96	55.832	Gorilla_gorilla
ENSSMAG00000006347	larp1b	97	83.074	ENSHBUG00000009730	larp1b	83	85.323	Haplochromis_burtoni
ENSSMAG00000006347	larp1b	75	76.616	ENSHCOG00000000918	larp1b	95	81.185	Hippocampus_comes
ENSSMAG00000006347	larp1b	97	62.724	ENSIPUG00000012138	larp1b	81	69.241	Ictalurus_punctatus
ENSSMAG00000006347	larp1b	97	79.479	ENSKMAG00000011589	larp1b	87	80.000	Kryptolebias_marmoratus
ENSSMAG00000006347	larp1b	97	84.107	ENSLBEG00000005655	larp1b	85	87.051	Labrus_bergylta
ENSSMAG00000006347	larp1b	97	57.938	ENSLACG00000015247	LARP1B	99	46.226	Latimeria_chalumnae
ENSSMAG00000006347	larp1b	97	62.289	ENSLOCG00000010684	larp1b	93	60.659	Lepisosteus_oculatus
ENSSMAG00000006347	larp1b	91	55.650	ENSMFAG00000002218	LARP1B	96	56.000	Macaca_fascicularis
ENSSMAG00000006347	larp1b	91	55.544	ENSMMUG00000021347	LARP1B	96	55.892	Macaca_mulatta
ENSSMAG00000006347	larp1b	90	50.780	ENSMNEG00000030406	LARP1B	95	60.908	Macaca_nemestrina
ENSSMAG00000006347	larp1b	91	54.051	ENSMLEG00000009306	LARP1B	96	54.775	Mandrillus_leucophaeus
ENSSMAG00000006347	larp1b	97	84.663	ENSMAMG00000000081	larp1b	86	86.289	Mastacembelus_armatus
ENSSMAG00000006347	larp1b	83	79.500	ENSMZEG00005002545	larp1b	93	84.828	Maylandia_zebra
ENSSMAG00000006347	larp1b	88	55.497	ENSMGAG00000004809	LARP1B	99	50.266	Meleagris_gallopavo
ENSSMAG00000006347	larp1b	93	56.342	ENSMICG00000036111	LARP1B	96	57.675	Microcebus_murinus
ENSSMAG00000006347	larp1b	54	39.662	ENSMICG00000028052	-	97	38.941	Microcebus_murinus
ENSSMAG00000006347	larp1b	92	57.620	ENSMODG00000012300	LARP1B	81	57.128	Monodelphis_domestica
ENSSMAG00000006347	larp1b	97	83.090	ENSMALG00000003638	larp1b	88	83.316	Monopterus_albus
ENSSMAG00000006347	larp1b	92	56.642	ENSMPUG00000017365	LARP1B	80	56.545	Mustela_putorius_furo
ENSSMAG00000006347	larp1b	92	54.037	ENSMLUG00000010229	LARP1B	99	54.795	Myotis_lucifugus
ENSSMAG00000006347	larp1b	88	90.000	ENSNBRG00000023846	larp1b	80	90.000	Neolamprologus_brichardi
ENSSMAG00000006347	larp1b	92	54.526	ENSNLEG00000013819	LARP1B	97	55.184	Nomascus_leucogenys
ENSSMAG00000006347	larp1b	70	56.615	ENSMEUG00000010308	LARP1B	73	58.902	Notamacropus_eugenii
ENSSMAG00000006347	larp1b	84	50.753	ENSOPRG00000005478	LARP1B	83	59.119	Ochotona_princeps
ENSSMAG00000006347	larp1b	94	79.360	ENSONIG00000012386	larp1b	97	78.810	Oreochromis_niloticus
ENSSMAG00000006347	larp1b	93	53.903	ENSOCUG00000013330	LARP1B	95	55.044	Oryctolagus_cuniculus
ENSSMAG00000006347	larp1b	95	77.908	ENSORLG00000017954	larp1b	84	78.322	Oryzias_latipes
ENSSMAG00000006347	larp1b	96	77.287	ENSORLG00020013081	larp1b	84	78.431	Oryzias_latipes_hni
ENSSMAG00000006347	larp1b	96	77.287	ENSORLG00015009580	larp1b	84	78.431	Oryzias_latipes_hsok
ENSSMAG00000006347	larp1b	94	81.557	ENSOMEG00000004210	larp1b	84	82.263	Oryzias_melastigma
ENSSMAG00000006347	larp1b	91	57.158	ENSOGAG00000005771	LARP1B	100	55.738	Otolemur_garnettii
ENSSMAG00000006347	larp1b	92	55.191	ENSOARG00000015300	LARP1B	96	55.604	Ovis_aries
ENSSMAG00000006347	larp1b	92	55.263	ENSPPAG00000030439	LARP1B	96	56.048	Pan_paniscus
ENSSMAG00000006347	larp1b	54	50.730	ENSPPRG00000002743	-	98	50.279	Panthera_pardus
ENSSMAG00000006347	larp1b	54	50.547	ENSPTIG00000011225	LARP1B	98	50.139	Panthera_tigris_altaica
ENSSMAG00000006347	larp1b	92	55.158	ENSPTRG00000016437	LARP1B	96	55.940	Pan_troglodytes
ENSSMAG00000006347	larp1b	91	55.757	ENSPANG00000012488	LARP1B	96	56.108	Papio_anubis
ENSSMAG00000006347	larp1b	90	54.048	ENSPKIG00000014360	larp1b	90	53.864	Paramormyrops_kingsleyae
ENSSMAG00000006347	larp1b	92	56.250	ENSPSIG00000012885	LARP1B	97	56.250	Pelodiscus_sinensis
ENSSMAG00000006347	larp1b	84	69.671	ENSPMGG00000007207	larp1b	88	74.898	Periophthalmus_magnuspinnatus
ENSSMAG00000006347	larp1b	70	55.245	ENSPMAG00000002700	larp1b	96	50.000	Petromyzon_marinus
ENSSMAG00000006347	larp1b	95	55.487	ENSPCIG00000026516	LARP1B	93	62.517	Phascolarctos_cinereus
ENSSMAG00000006347	larp1b	99	77.493	ENSPFOG00000019519	larp1b	85	80.316	Poecilia_formosa
ENSSMAG00000006347	larp1b	58	75.820	ENSPFOG00000022837	-	83	75.130	Poecilia_formosa
ENSSMAG00000006347	larp1b	95	80.679	ENSPLAG00000007115	larp1b	85	80.757	Poecilia_latipinna
ENSSMAG00000006347	larp1b	99	78.002	ENSPMEG00000001224	larp1b	85	81.034	Poecilia_mexicana
ENSSMAG00000006347	larp1b	92	53.659	ENSPCAG00000007546	LARP1B	96	54.230	Procavia_capensis
ENSSMAG00000006347	larp1b	83	58.667	ENSPCOG00000021874	LARP1B	96	69.828	Propithecus_coquereli
ENSSMAG00000006347	larp1b	91	52.478	ENSPVAG00000005373	LARP1B	96	52.845	Pteropus_vampyrus
ENSSMAG00000006347	larp1b	83	77.887	ENSPNYG00000017357	larp1b	93	82.679	Pundamilia_nyererei
ENSSMAG00000006347	larp1b	96	61.920	ENSPNAG00000008823	larp1b	80	69.689	Pygocentrus_nattereri
ENSSMAG00000006347	larp1b	54	50.276	ENSRBIG00000039982	-	98	50.000	Rhinopithecus_bieti
ENSSMAG00000006347	larp1b	91	55.650	ENSRROG00000030771	LARP1B	96	56.000	Rhinopithecus_roxellana
ENSSMAG00000006347	larp1b	68	51.613	ENSSHAG00000014474	LARP1B	99	51.416	Sarcophilus_harrisii
ENSSMAG00000006347	larp1b	99	85.181	ENSSDUG00000004182	larp1b	84	88.357	Seriola_dumerili
ENSSMAG00000006347	larp1b	87	89.431	ENSSLDG00000014613	larp1b	82	94.737	Seriola_lalandi_dorsalis
ENSSMAG00000006347	larp1b	89	55.655	ENSSPUG00000011837	LARP1B	85	69.757	Sphenodon_punctatus
ENSSMAG00000006347	larp1b	93	85.054	ENSSPAG00000017772	larp1b	84	85.683	Stegastes_partitus
ENSSMAG00000006347	larp1b	94	55.266	ENSSSCG00000034280	LARP1B	98	78.652	Sus_scrofa
ENSSMAG00000006347	larp1b	79	59.452	ENSTGUG00000002098	-	92	58.997	Taeniopygia_guttata
ENSSMAG00000006347	larp1b	97	78.115	ENSTRUG00000005612	larp1b	84	78.022	Takifugu_rubripes
ENSSMAG00000006347	larp1b	93	75.731	ENSTNIG00000012398	larp1b	97	72.643	Tetraodon_nigroviridis
ENSSMAG00000006347	larp1b	64	60.197	ENSTBEG00000004177	LARP1B	65	60.197	Tupaia_belangeri
ENSSMAG00000006347	larp1b	81	56.938	ENSTTRG00000012984	LARP1B	88	56.919	Tursiops_truncatus
ENSSMAG00000006347	larp1b	90	56.569	ENSUMAG00000007373	LARP1B	95	56.751	Ursus_maritimus
ENSSMAG00000006347	larp1b	75	52.470	ENSVPAG00000007223	LARP1B	76	55.064	Vicugna_pacos
ENSSMAG00000006347	larp1b	93	55.767	ENSVVUG00000011307	LARP1B	99	55.876	Vulpes_vulpes
ENSSMAG00000006347	larp1b	96	50.470	ENSXETG00000022512	larp1b	88	52.324	Xenopus_tropicalis
ENSSMAG00000006347	larp1b	70	75.970	ENSXCOG00000004435	larp1b	75	72.093	Xiphophorus_couchianus
ENSSMAG00000006347	larp1b	94	81.317	ENSXMAG00000008150	larp1b	84	81.373	Xiphophorus_maculatus