EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000006451 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 33504 bases
Position: chr2:3831581-3865084
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000010654	ResIII	PF04851.15	3.2e-07	1	1
ENSSMAP00000010564	ResIII	PF04851.15	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000010797	-	4908	-	ENSSMAP00000010654	1635 (aa)	-	-
ENSSMAT00000010706	-	5892	-	ENSSMAP00000010564	1859 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000006451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000006451	chd3	94	67.096	ENSSMAG00000010969	-	78	81.481
ENSSMAG00000006451	chd3	94	84.810	ENSSMAG00000012594	chd4a	82	82.424
ENSSMAG00000006451	chd3	99	68.306	ENSSMAG00000017926	-	86	78.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006451	chd3	99	77.237	ENSG00000170004	CHD3	79	91.304	Homo_sapiens
ENSSMAG00000006451	chd3	99	89.744	ENSAPOG00000005614	chd3	94	96.842	Acanthochromis_polyacanthus
ENSSMAG00000006451	chd3	67	85.948	ENSAMEG00000003025	-	100	75.053	Ailuropoda_melanoleuca
ENSSMAG00000006451	chd3	99	90.221	ENSACIG00000019671	chd3	98	99.405	Amphilophus_citrinellus
ENSSMAG00000006451	chd3	100	92.792	ENSAOCG00000023784	chd3	97	96.842	Amphiprion_ocellaris
ENSSMAG00000006451	chd3	100	92.846	ENSAPEG00000006341	chd3	90	93.433	Amphiprion_percula
ENSSMAG00000006451	chd3	100	92.443	ENSATEG00000000848	chd3	94	98.810	Anabas_testudineus
ENSSMAG00000006451	chd3	99	77.158	ENSACAG00000004276	CHD3	75	93.168	Anolis_carolinensis
ENSSMAG00000006451	chd3	95	80.208	ENSANAG00000034323	CHD3	84	91.304	Aotus_nancymaae
ENSSMAG00000006451	chd3	93	95.570	ENSACLG00000009222	chd3	95	90.170	Astatotilapia_calliptera
ENSSMAG00000006451	chd3	99	75.677	ENSBTAG00000014377	CHD3	81	91.358	Bos_taurus
ENSSMAG00000006451	chd3	99	77.177	ENSCJAG00000014766	CHD3	77	91.304	Callithrix_jacchus
ENSSMAG00000006451	chd3	99	75.854	ENSCAFG00000016859	CHD3	77	91.358	Canis_familiaris
ENSSMAG00000006451	chd3	99	76.992	ENSCAFG00020007422	CHD3	84	91.358	Canis_lupus_dingo
ENSSMAG00000006451	chd3	100	74.789	ENSCHIG00000016737	CHD3	78	91.358	Capra_hircus
ENSSMAG00000006451	chd3	94	87.209	ENSTSYG00000035658	CHD3	85	91.304	Carlito_syrichta
ENSSMAG00000006451	chd3	99	72.503	ENSCAPG00000014864	CHD3	77	91.304	Cavia_aperea
ENSSMAG00000006451	chd3	99	75.264	ENSCPOG00000022653	CHD3	77	91.304	Cavia_porcellus
ENSSMAG00000006451	chd3	99	77.237	ENSCCAG00000034792	CHD3	77	91.304	Cebus_capucinus
ENSSMAG00000006451	chd3	99	77.117	ENSCATG00000041717	CHD3	79	91.304	Cercocebus_atys
ENSSMAG00000006451	chd3	99	76.411	ENSCLAG00000010523	CHD3	79	90.741	Chinchilla_lanigera
ENSSMAG00000006451	chd3	95	80.706	ENSCSAG00000011122	CHD3	80	91.304	Chlorocebus_sabaeus
ENSSMAG00000006451	chd3	99	80.061	ENSCPBG00000011966	CHD3	94	90.476	Chrysemys_picta_bellii
ENSSMAG00000006451	chd3	99	77.177	ENSCANG00000037641	CHD3	86	91.304	Colobus_angolensis_palliatus
ENSSMAG00000006451	chd3	99	76.036	ENSCGRG00001011306	Chd3	79	90.741	Cricetulus_griseus_chok1gshd
ENSSMAG00000006451	chd3	94	68.578	ENSCGRG00000007878	Chd3	74	89.796	Cricetulus_griseus_crigri
ENSSMAG00000006451	chd3	99	87.546	ENSCSEG00000004489	chd3	93	93.688	Cynoglossus_semilaevis
ENSSMAG00000006451	chd3	99	87.783	ENSCVAG00000007293	chd3	89	97.357	Cyprinodon_variegatus
ENSSMAG00000006451	chd3	96	90.127	ENSDARG00000021405	chd3	91	91.111	Danio_rerio
ENSSMAG00000006451	chd3	91	72.511	ENSDNOG00000047846	CHD3	70	87.407	Dasypus_novemcinctus
ENSSMAG00000006451	chd3	99	76.396	ENSDORG00000010713	Chd3	79	90.741	Dipodomys_ordii
ENSSMAG00000006451	chd3	99	71.000	ENSETEG00000017733	CHD3	83	90.123	Echinops_telfairi
ENSSMAG00000006451	chd3	74	86.709	ENSEBUG00000008310	chd3	81	86.709	Eptatretus_burgeri
ENSSMAG00000006451	chd3	99	76.000	ENSEASG00005019360	CHD3	84	91.304	Equus_asinus_asinus
ENSSMAG00000006451	chd3	100	74.736	ENSECAG00000010051	CHD3	84	91.304	Equus_caballus
ENSSMAG00000006451	chd3	92	91.753	ENSEEUG00000015205	CHD3	79	91.753	Erinaceus_europaeus
ENSSMAG00000006451	chd3	93	96.644	ENSELUG00000019499	chd3	99	97.279	Esox_lucius
ENSSMAG00000006451	chd3	99	75.899	ENSFCAG00000009629	CHD3	75	90.123	Felis_catus
ENSSMAG00000006451	chd3	99	74.985	ENSFDAG00000008220	CHD3	78	90.741	Fukomys_damarensis
ENSSMAG00000006451	chd3	95	90.052	ENSGMOG00000013599	chd3	78	95.238	Gadus_morhua
ENSSMAG00000006451	chd3	64	88.458	ENSGAFG00000004055	chd3	91	90.255	Gambusia_affinis
ENSSMAG00000006451	chd3	96	93.617	ENSGACG00000019275	chd3	94	83.526	Gasterosteus_aculeatus
ENSSMAG00000006451	chd3	86	78.468	ENSGAGG00000013164	CHD3	95	84.483	Gopherus_agassizii
ENSSMAG00000006451	chd3	99	77.177	ENSGGOG00000013496	CHD3	86	91.304	Gorilla_gorilla
ENSSMAG00000006451	chd3	94	87.209	ENSHGLG00000012017	CHD3	78	90.741	Heterocephalus_glaber_female
ENSSMAG00000006451	chd3	78	86.885	ENSHGLG00100013902	CHD3	84	84.615	Heterocephalus_glaber_male
ENSSMAG00000006451	chd3	97	93.158	ENSHCOG00000010170	chd3	90	86.608	Hippocampus_comes
ENSSMAG00000006451	chd3	99	81.435	ENSIPUG00000003271	chd3	92	85.188	Ictalurus_punctatus
ENSSMAG00000006451	chd3	99	77.270	ENSSTOG00000025907	CHD3	79	90.741	Ictidomys_tridecemlineatus
ENSSMAG00000006451	chd3	99	77.297	ENSJJAG00000017633	Chd3	79	91.358	Jaculus_jaculus
ENSSMAG00000006451	chd3	92	97.959	ENSKMAG00000019292	chd3	95	89.619	Kryptolebias_marmoratus
ENSSMAG00000006451	chd3	91	94.118	ENSLBEG00000028485	chd3	84	96.957	Labrus_bergylta
ENSSMAG00000006451	chd3	99	72.277	ENSLACG00000008031	CHD3	92	72.032	Latimeria_chalumnae
ENSSMAG00000006451	chd3	95	87.692	ENSLOCG00000013965	chd3	90	80.501	Lepisosteus_oculatus
ENSSMAG00000006451	chd3	99	73.563	ENSLAFG00000000572	CHD3	77	91.358	Loxodonta_africana
ENSSMAG00000006451	chd3	99	77.117	ENSMFAG00000020113	CHD3	86	91.304	Macaca_fascicularis
ENSSMAG00000006451	chd3	95	80.208	ENSMMUG00000022221	CHD3	79	91.304	Macaca_mulatta
ENSSMAG00000006451	chd3	99	77.117	ENSMNEG00000001728	CHD3	86	91.304	Macaca_nemestrina
ENSSMAG00000006451	chd3	99	77.117	ENSMLEG00000032249	CHD3	79	91.304	Mandrillus_leucophaeus
ENSSMAG00000006451	chd3	99	91.606	ENSMAMG00000000564	chd3	95	96.842	Mastacembelus_armatus
ENSSMAG00000006451	chd3	99	76.034	ENSMAUG00000013873	Chd3	85	90.741	Mesocricetus_auratus
ENSSMAG00000006451	chd3	99	75.630	ENSMICG00000008741	CHD3	77	91.304	Microcebus_murinus
ENSSMAG00000006451	chd3	99	76.216	ENSMOCG00000004848	Chd3	79	90.741	Microtus_ochrogaster
ENSSMAG00000006451	chd3	99	87.387	ENSMMOG00000012699	chd3	94	84.678	Mola_mola
ENSSMAG00000006451	chd3	99	77.182	ENSMODG00000007509	CHD3	100	74.045	Monodelphis_domestica
ENSSMAG00000006451	chd3	99	76.310	MGP_CAROLIEiJ_G0016564	Chd3	76	90.741	Mus_caroli
ENSSMAG00000006451	chd3	99	76.817	ENSMUSG00000018474	Chd3	88	76.471	Mus_musculus
ENSSMAG00000006451	chd3	99	77.237	MGP_PahariEiJ_G0017695	Chd3	93	73.849	Mus_pahari
ENSSMAG00000006451	chd3	99	76.937	MGP_SPRETEiJ_G0017400	Chd3	88	76.531	Mus_spretus
ENSSMAG00000006451	chd3	94	75.057	ENSMPUG00000008861	CHD3	83	90.123	Mustela_putorius_furo
ENSSMAG00000006451	chd3	99	75.412	ENSMLUG00000014643	-	80	91.358	Myotis_lucifugus
ENSSMAG00000006451	chd3	100	74.486	ENSNGAG00000000773	Chd3	77	90.741	Nannospalax_galili
ENSSMAG00000006451	chd3	99	88.221	ENSNBRG00000000636	chd3	98	89.887	Neolamprologus_brichardi
ENSSMAG00000006451	chd3	92	89.189	ENSNLEG00000009770	CHD3	83	89.189	Nomascus_leucogenys
ENSSMAG00000006451	chd3	84	87.209	ENSMEUG00000005852	CHD3	72	91.304	Notamacropus_eugenii
ENSSMAG00000006451	chd3	99	74.765	ENSOPRG00000011069	CHD3	98	73.347	Ochotona_princeps
ENSSMAG00000006451	chd3	99	74.781	ENSODEG00000017785	CHD3	78	91.304	Octodon_degus
ENSSMAG00000006451	chd3	98	90.331	ENSONIG00000009292	chd3	94	88.907	Oreochromis_niloticus
ENSSMAG00000006451	chd3	100	70.798	ENSOCUG00000029299	CHD3	94	70.037	Oryctolagus_cuniculus
ENSSMAG00000006451	chd3	90	84.024	ENSORLG00000007107	chd3	88	87.279	Oryzias_latipes
ENSSMAG00000006451	chd3	61	88.347	ENSORLG00020008387	chd3	86	89.044	Oryzias_latipes_hni
ENSSMAG00000006451	chd3	99	89.470	ENSOMEG00000013691	chd3	99	89.848	Oryzias_melastigma
ENSSMAG00000006451	chd3	94	87.209	ENSOGAG00000003216	CHD3	80	91.304	Otolemur_garnettii
ENSSMAG00000006451	chd3	99	74.882	ENSOARG00000017855	CHD3	79	86.875	Ovis_aries
ENSSMAG00000006451	chd3	95	80.208	ENSPPAG00000032886	CHD3	85	91.304	Pan_paniscus
ENSSMAG00000006451	chd3	99	77.080	ENSPPRG00000000626	CHD3	78	90.741	Panthera_pardus
ENSSMAG00000006451	chd3	99	77.237	ENSPTRG00000008714	CHD3	86	91.304	Pan_troglodytes
ENSSMAG00000006451	chd3	95	80.546	ENSPANG00000023938	CHD3	86	91.304	Papio_anubis
ENSSMAG00000006451	chd3	95	92.632	ENSPKIG00000006305	chd3	92	83.608	Paramormyrops_kingsleyae
ENSSMAG00000006451	chd3	65	81.005	ENSPSIG00000010177	CHD3	97	81.198	Pelodiscus_sinensis
ENSSMAG00000006451	chd3	99	75.220	ENSPEMG00000014262	Chd3	78	91.304	Peromyscus_maniculatus_bairdii
ENSSMAG00000006451	chd3	99	78.264	ENSPCIG00000005442	CHD3	92	86.017	Phascolarctos_cinereus
ENSSMAG00000006451	chd3	95	95.789	ENSPFOG00000012464	chd3	86	90.065	Poecilia_formosa
ENSSMAG00000006451	chd3	89	95.968	ENSPLAG00000002887	chd3	87	95.968	Poecilia_latipinna
ENSSMAG00000006451	chd3	52	92.479	ENSPMEG00000016725	chd3	83	88.224	Poecilia_mexicana
ENSSMAG00000006451	chd3	92	97.810	ENSPREG00000011044	chd3	91	94.863	Poecilia_reticulata
ENSSMAG00000006451	chd3	95	80.729	ENSPPYG00000007940	CHD3	80	91.304	Pongo_abelii
ENSSMAG00000006451	chd3	96	76.671	ENSPCAG00000004350	CHD3	77	91.358	Procavia_capensis
ENSSMAG00000006451	chd3	94	87.209	ENSPCOG00000020952	CHD3	79	91.304	Propithecus_coquereli
ENSSMAG00000006451	chd3	86	74.066	ENSPVAG00000016344	CHD3	66	91.358	Pteropus_vampyrus
ENSSMAG00000006451	chd3	96	94.086	ENSPNAG00000020393	chd3	97	94.340	Pygocentrus_nattereri
ENSSMAG00000006451	chd3	100	74.458	ENSRNOG00000009722	Chd3	87	90.741	Rattus_norvegicus
ENSSMAG00000006451	chd3	95	80.208	ENSRBIG00000033562	CHD3	86	91.304	Rhinopithecus_bieti
ENSSMAG00000006451	chd3	99	77.117	ENSRROG00000029554	CHD3	86	91.304	Rhinopithecus_roxellana
ENSSMAG00000006451	chd3	99	77.237	ENSSBOG00000020719	CHD3	84	91.304	Saimiri_boliviensis_boliviensis
ENSSMAG00000006451	chd3	99	77.191	ENSSHAG00000014412	CHD3	88	81.818	Sarcophilus_harrisii
ENSSMAG00000006451	chd3	95	84.194	ENSSFOG00015023123	chd3	97	76.374	Scleropages_formosus
ENSSMAG00000006451	chd3	59	91.152	ENSSDUG00000005792	chd3	87	91.152	Seriola_dumerili
ENSSMAG00000006451	chd3	97	94.245	ENSSPAG00000013694	chd3	99	97.872	Stegastes_partitus
ENSSMAG00000006451	chd3	99	77.464	ENSSSCG00000021363	CHD3	93	90.244	Sus_scrofa
ENSSMAG00000006451	chd3	84	90.330	ENSTRUG00000014990	chd3	91	84.640	Takifugu_rubripes
ENSSMAG00000006451	chd3	100	87.856	ENSTNIG00000012998	chd3	93	87.553	Tetraodon_nigroviridis
ENSSMAG00000006451	chd3	71	91.753	ENSTBEG00000011454	-	70	91.753	Tupaia_belangeri
ENSSMAG00000006451	chd3	97	76.891	ENSTTRG00000010295	CHD3	78	90.741	Tursiops_truncatus
ENSSMAG00000006451	chd3	95	81.579	ENSUAMG00000005475	CHD3	88	92.271	Ursus_americanus
ENSSMAG00000006451	chd3	57	91.304	ENSVPAG00000010794	-	59	92.593	Vicugna_pacos
ENSSMAG00000006451	chd3	99	76.703	ENSVVUG00000028011	CHD3	81	91.358	Vulpes_vulpes
ENSSMAG00000006451	chd3	100	69.309	ENSXETG00000012991	chd3	77	93.168	Xenopus_tropicalis
ENSSMAG00000006451	chd3	59	92.221	ENSXCOG00000000809	chd3	85	92.221	Xiphophorus_couchianus
ENSSMAG00000006451	chd3	94	95.699	ENSXMAG00000016035	chd3	99	98.214	Xiphophorus_maculatus