EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000006473 (Gene tree)
Gene ID: -
Gene Symbol: znf341
Alias: zgc:171837
Full Name: zinc finger protein 341
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 10015 bases
Position: chr11:5319303-5329317
Accession: ZDB-GENE-080204-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000010487	zf-C2H2	PF00096.26	8.8e-30	1	6
ENSSMAP00000010487	zf-C2H2	PF00096.26	8.8e-30	2	6
ENSSMAP00000010487	zf-C2H2	PF00096.26	8.8e-30	3	6
ENSSMAP00000010487	zf-C2H2	PF00096.26	8.8e-30	4	6
ENSSMAP00000010487	zf-C2H2	PF00096.26	8.8e-30	5	6
ENSSMAP00000010487	zf-C2H2	PF00096.26	8.8e-30	6	6
ENSSMAP00000010487	zf-met	PF12874.7	3.5e-08	1	2
ENSSMAP00000010487	zf-met	PF12874.7	3.5e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000010631	-	2889	-	ENSSMAP00000010487	962 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000006473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000006473	znf341	58	38.571	ENSSMAG00000009020	znf526	59	38.571
ENSSMAG00000006473	znf341	56	33.333	ENSSMAG00000018844	prdm5	77	50.000
ENSSMAG00000006473	znf341	50	48.936	ENSSMAG00000013663	-	90	48.980
ENSSMAG00000006473	znf341	50	32.955	ENSSMAG00000000056	-	54	46.939
ENSSMAG00000006473	znf341	55	33.621	ENSSMAG00000005081	-	82	33.333
ENSSMAG00000006473	znf341	50	41.429	ENSSMAG00000015356	-	76	47.059
ENSSMAG00000006473	znf341	52	53.061	ENSSMAG00000007561	znf236	65	57.143
ENSSMAG00000006473	znf341	50	39.623	ENSSMAG00000007380	znf710b	56	37.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006473	znf341	100	80.000	ENSAPOG00000016509	znf341	100	81.134	Acanthochromis_polyacanthus
ENSSMAG00000006473	znf341	93	93.293	ENSACIG00000016180	znf341	99	93.333	Amphilophus_citrinellus
ENSSMAG00000006473	znf341	100	80.103	ENSAOCG00000000960	znf341	98	81.443	Amphiprion_ocellaris
ENSSMAG00000006473	znf341	94	92.025	ENSAPEG00000006358	znf341	100	92.188	Amphiprion_percula
ENSSMAG00000006473	znf341	100	79.278	ENSATEG00000003196	znf341	100	80.206	Anabas_testudineus
ENSSMAG00000006473	znf341	75	75.862	ENSACLG00000014349	znf341	77	75.204	Astatotilapia_calliptera
ENSSMAG00000006473	znf341	87	65.595	ENSAMXG00000016921	znf341	97	75.989	Astyanax_mexicanus
ENSSMAG00000006473	znf341	69	82.822	ENSCSEG00000003536	znf341	99	82.822	Cynoglossus_semilaevis
ENSSMAG00000006473	znf341	69	73.521	ENSCVAG00000016325	znf341	73	75.535	Cyprinodon_variegatus
ENSSMAG00000006473	znf341	77	82.659	ENSDARG00000103725	znf341	96	82.759	Danio_rerio
ENSSMAG00000006473	znf341	91	70.795	ENSELUG00000018438	znf341	88	92.123	Esox_lucius
ENSSMAG00000006473	znf341	100	70.204	ENSFHEG00000009763	znf341	100	72.103	Fundulus_heteroclitus
ENSSMAG00000006473	znf341	100	70.215	ENSGAFG00000020131	znf341	93	74.468	Gambusia_affinis
ENSSMAG00000006473	znf341	75	75.724	ENSHBUG00000012828	znf341	84	75.068	Haplochromis_burtoni
ENSSMAG00000006473	znf341	95	70.259	ENSHCOG00000004879	znf341	97	71.079	Hippocampus_comes
ENSSMAG00000006473	znf341	89	62.558	ENSIPUG00000002075	znf341	83	84.932	Ictalurus_punctatus
ENSSMAG00000006473	znf341	100	75.930	ENSKMAG00000006686	znf341	100	75.673	Kryptolebias_marmoratus
ENSSMAG00000006473	znf341	100	75.460	ENSLBEG00000016666	znf341	100	76.074	Labrus_bergylta
ENSSMAG00000006473	znf341	91	62.942	ENSLOCG00000000947	znf341	88	68.231	Lepisosteus_oculatus
ENSSMAG00000006473	znf341	100	83.058	ENSMAMG00000008000	znf341	98	82.627	Mastacembelus_armatus
ENSSMAG00000006473	znf341	75	76.000	ENSMZEG00005021851	znf341	77	75.341	Maylandia_zebra
ENSSMAG00000006473	znf341	77	90.683	ENSMMOG00000019626	znf341	92	93.857	Mola_mola
ENSSMAG00000006473	znf341	74	74.342	ENSMODG00000002856	ZNF341	87	75.258	Monodelphis_domestica
ENSSMAG00000006473	znf341	87	83.075	ENSMALG00000006492	znf341	96	84.401	Monopterus_albus
ENSSMAG00000006473	znf341	52	76.854	ENSNBRG00000019550	znf341	100	78.959	Neolamprologus_brichardi
ENSSMAG00000006473	znf341	93	73.932	ENSONIG00000009210	znf341	65	94.083	Oreochromis_niloticus
ENSSMAG00000006473	znf341	83	88.199	ENSORLG00000000956	znf341	93	88.199	Oryzias_latipes
ENSSMAG00000006473	znf341	89	74.653	ENSORLG00020004162	znf341	95	77.114	Oryzias_latipes_hni
ENSSMAG00000006473	znf341	90	69.735	ENSORLG00015018360	znf341	93	88.199	Oryzias_latipes_hsok
ENSSMAG00000006473	znf341	100	70.928	ENSOMEG00000014403	znf341	79	70.270	Oryzias_melastigma
ENSSMAG00000006473	znf341	86	66.100	ENSPKIG00000023946	znf341	86	69.268	Paramormyrops_kingsleyae
ENSSMAG00000006473	znf341	83	90.062	ENSPMGG00000014849	znf341	93	90.062	Periophthalmus_magnuspinnatus
ENSSMAG00000006473	znf341	100	70.637	ENSPFOG00000013875	znf341	98	90.000	Poecilia_formosa
ENSSMAG00000006473	znf341	100	70.842	ENSPLAG00000014192	znf341	93	73.637	Poecilia_latipinna
ENSSMAG00000006473	znf341	100	70.945	ENSPMEG00000020155	znf341	93	73.192	Poecilia_mexicana
ENSSMAG00000006473	znf341	100	69.583	ENSPREG00000001388	znf341	100	68.686	Poecilia_reticulata
ENSSMAG00000006473	znf341	93	88.824	ENSPNYG00000015106	znf341	99	88.824	Pundamilia_nyererei
ENSSMAG00000006473	znf341	79	82.099	ENSPNAG00000027229	znf341	96	63.823	Pygocentrus_nattereri
ENSSMAG00000006473	znf341	93	65.740	ENSSFOG00015014678	znf341	89	66.399	Scleropages_formosus
ENSSMAG00000006473	znf341	94	95.092	ENSSDUG00000014540	znf341	100	95.092	Seriola_dumerili
ENSSMAG00000006473	znf341	94	94.479	ENSSLDG00000019660	znf341	100	94.479	Seriola_lalandi_dorsalis
ENSSMAG00000006473	znf341	95	74.973	ENSTRUG00000011385	znf341	97	75.934	Takifugu_rubripes
ENSSMAG00000006473	znf341	85	76.063	ENSTNIG00000005051	znf341	100	75.182	Tetraodon_nigroviridis
ENSSMAG00000006473	znf341	74	71.331	ENSXCOG00000000036	znf341	91	68.889	Xiphophorus_couchianus
ENSSMAG00000006473	znf341	100	70.378	ENSXMAG00000014133	znf341	93	75.028	Xiphophorus_maculatus