EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000006612 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 19406 bases
Position: chr8:18340476-18359881
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000010706	Suf	PF05843.14	1.6e-12	1	1
ENSSMAP00000010706	S1	PF00575.23	7.5e-63	1	4
ENSSMAP00000010706	S1	PF00575.23	7.5e-63	2	4
ENSSMAP00000010706	S1	PF00575.23	7.5e-63	3	4
ENSSMAP00000010706	S1	PF00575.23	7.5e-63	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000010850	-	9630	-	ENSSMAP00000010706	1809 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000006612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006612	pdcd11	99	44.738	ENSG00000148843	PDCD11	99	44.497	Homo_sapiens
ENSSMAG00000006612	pdcd11	100	82.078	ENSAPOG00000015629	pdcd11	100	81.748	Acanthochromis_polyacanthus
ENSSMAG00000006612	pdcd11	99	44.521	ENSAMEG00000017935	PDCD11	99	44.568	Ailuropoda_melanoleuca
ENSSMAG00000006612	pdcd11	51	68.301	ENSACIG00000006458	-	98	68.301	Amphilophus_citrinellus
ENSSMAG00000006612	pdcd11	100	81.748	ENSAOCG00000015287	pdcd11	100	81.803	Amphiprion_ocellaris
ENSSMAG00000006612	pdcd11	54	78.014	ENSAPEG00000020240	pdcd11	97	78.014	Amphiprion_percula
ENSSMAG00000006612	pdcd11	99	82.554	ENSATEG00000021043	pdcd11	99	82.554	Anabas_testudineus
ENSSMAG00000006612	pdcd11	99	45.214	ENSAPLG00000010301	PDCD11	99	44.786	Anas_platyrhynchos
ENSSMAG00000006612	pdcd11	99	45.677	ENSACAG00000004796	PDCD11	99	45.484	Anolis_carolinensis
ENSSMAG00000006612	pdcd11	99	44.099	ENSANAG00000034576	PDCD11	99	44.057	Aotus_nancymaae
ENSSMAG00000006612	pdcd11	93	87.417	ENSACLG00000018236	pdcd11	99	81.792	Astatotilapia_calliptera
ENSSMAG00000006612	pdcd11	99	50.712	ENSAMXG00000005458	pdcd11	87	79.000	Astyanax_mexicanus
ENSSMAG00000006612	pdcd11	99	44.831	ENSBTAG00000009715	PDCD11	99	44.889	Bos_taurus
ENSSMAG00000006612	pdcd11	99	44.251	ENSCJAG00000018257	PDCD11	99	43.932	Callithrix_jacchus
ENSSMAG00000006612	pdcd11	99	44.809	ENSCAFG00000010411	PDCD11	99	44.645	Canis_familiaris
ENSSMAG00000006612	pdcd11	99	45.220	ENSCAFG00020010369	PDCD11	99	45.108	Canis_lupus_dingo
ENSSMAG00000006612	pdcd11	99	44.871	ENSCHIG00000025218	PDCD11	99	44.497	Capra_hircus
ENSSMAG00000006612	pdcd11	95	43.984	ENSTSYG00000033423	PDCD11	98	43.984	Carlito_syrichta
ENSSMAG00000006612	pdcd11	95	38.439	ENSCAPG00000005386	PDCD11	99	38.439	Cavia_aperea
ENSSMAG00000006612	pdcd11	99	43.587	ENSCPOG00000010957	PDCD11	99	44.165	Cavia_porcellus
ENSSMAG00000006612	pdcd11	99	44.139	ENSCCAG00000018950	PDCD11	99	43.932	Cebus_capucinus
ENSSMAG00000006612	pdcd11	99	44.662	ENSCATG00000044331	PDCD11	99	44.468	Cercocebus_atys
ENSSMAG00000006612	pdcd11	99	44.279	ENSCLAG00000001029	PDCD11	99	43.893	Chinchilla_lanigera
ENSSMAG00000006612	pdcd11	99	44.603	ENSCSAG00000005346	PDCD11	99	44.409	Chlorocebus_sabaeus
ENSSMAG00000006612	pdcd11	70	68.992	ENSCHOG00000004796	PDCD11	76	68.992	Choloepus_hoffmanni
ENSSMAG00000006612	pdcd11	91	62.059	ENSCPBG00000024487	PDCD11	99	62.647	Chrysemys_picta_bellii
ENSSMAG00000006612	pdcd11	84	31.793	ENSCING00000002715	-	87	31.150	Ciona_intestinalis
ENSSMAG00000006612	pdcd11	99	44.615	ENSCANG00000043300	PDCD11	99	44.462	Colobus_angolensis_palliatus
ENSSMAG00000006612	pdcd11	99	44.179	ENSCGRG00001006458	Pdcd11	99	43.996	Cricetulus_griseus_chok1gshd
ENSSMAG00000006612	pdcd11	99	44.049	ENSCGRG00000003583	Pdcd11	99	43.866	Cricetulus_griseus_crigri
ENSSMAG00000006612	pdcd11	97	77.036	ENSCSEG00000010739	pdcd11	99	77.432	Cynoglossus_semilaevis
ENSSMAG00000006612	pdcd11	100	66.397	ENSCVAG00000018903	pdcd11	100	65.857	Cyprinodon_variegatus
ENSSMAG00000006612	pdcd11	100	53.269	ENSDARG00000052480	pdcd11	100	53.438	Danio_rerio
ENSSMAG00000006612	pdcd11	99	44.649	ENSDNOG00000013838	PDCD11	99	44.228	Dasypus_novemcinctus
ENSSMAG00000006612	pdcd11	99	43.929	ENSDORG00000010420	Pdcd11	99	43.857	Dipodomys_ordii
ENSSMAG00000006612	pdcd11	69	33.894	FBgn0039182	CG5728	91	34.302	Drosophila_melanogaster
ENSSMAG00000006612	pdcd11	93	39.817	ENSETEG00000000813	PDCD11	98	39.703	Echinops_telfairi
ENSSMAG00000006612	pdcd11	73	51.034	ENSEBUG00000002358	-	89	51.034	Eptatretus_burgeri
ENSSMAG00000006612	pdcd11	95	45.304	ENSEASG00005015159	PDCD11	99	45.792	Equus_asinus_asinus
ENSSMAG00000006612	pdcd11	99	45.177	ENSECAG00000020507	PDCD11	99	45.090	Equus_caballus
ENSSMAG00000006612	pdcd11	89	44.521	ENSEEUG00000009245	PDCD11	89	45.763	Erinaceus_europaeus
ENSSMAG00000006612	pdcd11	100	60.965	ENSELUG00000004211	pdcd11	99	60.855	Esox_lucius
ENSSMAG00000006612	pdcd11	99	44.580	ENSFCAG00000002384	PDCD11	99	44.685	Felis_catus
ENSSMAG00000006612	pdcd11	99	46.104	ENSFALG00000008775	PDCD11	99	46.162	Ficedula_albicollis
ENSSMAG00000006612	pdcd11	99	44.197	ENSFDAG00000009532	PDCD11	99	43.879	Fukomys_damarensis
ENSSMAG00000006612	pdcd11	89	90.461	ENSFHEG00000022997	pdcd11	96	90.461	Fundulus_heteroclitus
ENSSMAG00000006612	pdcd11	93	62.295	ENSGMOG00000004186	pdcd11	94	62.295	Gadus_morhua
ENSSMAG00000006612	pdcd11	77	43.649	ENSGALG00000008265	PDCD11	99	43.113	Gallus_gallus
ENSSMAG00000006612	pdcd11	96	75.047	ENSGAFG00000012806	pdcd11	100	74.674	Gambusia_affinis
ENSSMAG00000006612	pdcd11	100	74.430	ENSGACG00000018233	pdcd11	97	85.455	Gasterosteus_aculeatus
ENSSMAG00000006612	pdcd11	95	47.592	ENSGAGG00000024314	PDCD11	99	47.705	Gopherus_agassizii
ENSSMAG00000006612	pdcd11	99	44.603	ENSGGOG00000011621	PDCD11	99	44.362	Gorilla_gorilla
ENSSMAG00000006612	pdcd11	99	78.103	ENSHBUG00000020226	pdcd11	99	77.986	Haplochromis_burtoni
ENSSMAG00000006612	pdcd11	99	43.757	ENSHGLG00000001462	PDCD11	99	43.492	Heterocephalus_glaber_female
ENSSMAG00000006612	pdcd11	99	43.228	ENSHGLG00100018779	PDCD11	99	42.963	Heterocephalus_glaber_male
ENSSMAG00000006612	pdcd11	100	72.183	ENSHCOG00000016006	pdcd11	100	72.292	Hippocampus_comes
ENSSMAG00000006612	pdcd11	63	53.018	ENSIPUG00000015102	pdcd11	99	54.310	Ictalurus_punctatus
ENSSMAG00000006612	pdcd11	99	44.646	ENSSTOG00000014553	PDCD11	99	44.688	Ictidomys_tridecemlineatus
ENSSMAG00000006612	pdcd11	99	44.861	ENSJJAG00000015523	Pdcd11	99	45.396	Jaculus_jaculus
ENSSMAG00000006612	pdcd11	50	71.242	ENSKMAG00000021182	pdcd11	99	71.133	Kryptolebias_marmoratus
ENSSMAG00000006612	pdcd11	99	55.732	ENSLOCG00000011818	pdcd11	99	55.677	Lepisosteus_oculatus
ENSSMAG00000006612	pdcd11	99	44.624	ENSLAFG00000008398	PDCD11	99	44.624	Loxodonta_africana
ENSSMAG00000006612	pdcd11	99	44.450	ENSMFAG00000044058	PDCD11	99	44.250	Macaca_fascicularis
ENSSMAG00000006612	pdcd11	99	44.450	ENSMMUG00000007058	PDCD11	99	44.250	Macaca_mulatta
ENSSMAG00000006612	pdcd11	99	44.450	ENSMNEG00000040726	PDCD11	99	44.256	Macaca_nemestrina
ENSSMAG00000006612	pdcd11	99	44.933	ENSMLEG00000040978	PDCD11	99	44.750	Mandrillus_leucophaeus
ENSSMAG00000006612	pdcd11	100	82.223	ENSMAMG00000009572	pdcd11	100	82.168	Mastacembelus_armatus
ENSSMAG00000006612	pdcd11	99	78.146	ENSMZEG00005008949	pdcd11	99	78.029	Maylandia_zebra
ENSSMAG00000006612	pdcd11	99	45.512	ENSMGAG00000010482	PDCD11	99	46.048	Meleagris_gallopavo
ENSSMAG00000006612	pdcd11	92	46.955	ENSMAUG00000014924	Pdcd11	97	47.241	Mesocricetus_auratus
ENSSMAG00000006612	pdcd11	99	45.561	ENSMICG00000012421	PDCD11	99	45.396	Microcebus_murinus
ENSSMAG00000006612	pdcd11	99	44.013	ENSMOCG00000021792	Pdcd11	99	43.624	Microtus_ochrogaster
ENSSMAG00000006612	pdcd11	99	65.347	ENSMMOG00000007572	pdcd11	97	73.436	Mola_mola
ENSSMAG00000006612	pdcd11	99	50.259	ENSMODG00000011077	PDCD11	99	42.285	Monodelphis_domestica
ENSSMAG00000006612	pdcd11	100	66.521	ENSMALG00000003859	pdcd11	99	75.270	Monopterus_albus
ENSSMAG00000006612	pdcd11	99	43.833	MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.944	Mus_caroli
ENSSMAG00000006612	pdcd11	99	43.740	ENSMUSG00000025047	Pdcd11	99	43.710	Mus_musculus
ENSSMAG00000006612	pdcd11	99	43.996	MGP_PahariEiJ_G0014540	Pdcd11	99	43.813	Mus_pahari
ENSSMAG00000006612	pdcd11	99	43.847	MGP_SPRETEiJ_G0023971	Pdcd11	99	43.876	Mus_spretus
ENSSMAG00000006612	pdcd11	99	44.752	ENSMPUG00000016829	PDCD11	99	45.149	Mustela_putorius_furo
ENSSMAG00000006612	pdcd11	99	44.286	ENSMLUG00000004997	PDCD11	99	44.638	Myotis_lucifugus
ENSSMAG00000006612	pdcd11	99	44.350	ENSNGAG00000018143	Pdcd11	99	44.456	Nannospalax_galili
ENSSMAG00000006612	pdcd11	85	81.962	ENSNBRG00000021596	pdcd11	97	74.011	Neolamprologus_brichardi
ENSSMAG00000006612	pdcd11	99	43.190	ENSNLEG00000026700	PDCD11	99	43.100	Nomascus_leucogenys
ENSSMAG00000006612	pdcd11	70	67.556	ENSMEUG00000013719	-	70	67.556	Notamacropus_eugenii
ENSSMAG00000006612	pdcd11	99	45.129	ENSOPRG00000010593	PDCD11	97	44.888	Ochotona_princeps
ENSSMAG00000006612	pdcd11	99	43.591	ENSODEG00000008079	PDCD11	99	43.667	Octodon_degus
ENSSMAG00000006612	pdcd11	99	78.268	ENSONIG00000018835	pdcd11	99	78.151	Oreochromis_niloticus
ENSSMAG00000006612	pdcd11	99	44.110	ENSOANG00000001636	-	99	44.086	Ornithorhynchus_anatinus
ENSSMAG00000006612	pdcd11	99	44.415	ENSOCUG00000006312	PDCD11	99	44.433	Oryctolagus_cuniculus
ENSSMAG00000006612	pdcd11	100	75.303	ENSORLG00020003642	pdcd11	100	75.303	Oryzias_latipes_hni
ENSSMAG00000006612	pdcd11	100	75.344	ENSORLG00015001618	pdcd11	100	75.344	Oryzias_latipes_hsok
ENSSMAG00000006612	pdcd11	74	75.148	ENSOMEG00000010904	pdcd11	98	75.148	Oryzias_melastigma
ENSSMAG00000006612	pdcd11	99	44.840	ENSOGAG00000008683	PDCD11	99	44.734	Otolemur_garnettii
ENSSMAG00000006612	pdcd11	99	44.526	ENSOARG00000003719	PDCD11	99	44.228	Ovis_aries
ENSSMAG00000006612	pdcd11	99	43.873	ENSPPAG00000024593	PDCD11	99	43.677	Pan_paniscus
ENSSMAG00000006612	pdcd11	99	44.597	ENSPPRG00000015133	PDCD11	99	44.849	Panthera_pardus
ENSSMAG00000006612	pdcd11	99	44.532	ENSPTIG00000011433	PDCD11	99	44.839	Panthera_tigris_altaica
ENSSMAG00000006612	pdcd11	99	44.762	ENSPTRG00000002911	PDCD11	99	44.468	Pan_troglodytes
ENSSMAG00000006612	pdcd11	99	44.644	ENSPANG00000020959	PDCD11	99	44.409	Papio_anubis
ENSSMAG00000006612	pdcd11	99	56.240	ENSPKIG00000000973	pdcd11	99	56.322	Paramormyrops_kingsleyae
ENSSMAG00000006612	pdcd11	78	44.537	ENSPSIG00000005102	PDCD11	95	44.952	Pelodiscus_sinensis
ENSSMAG00000006612	pdcd11	82	87.025	ENSPMGG00000007289	pdcd11	100	69.351	Periophthalmus_magnuspinnatus
ENSSMAG00000006612	pdcd11	99	43.529	ENSPEMG00000010315	Pdcd11	99	43.856	Peromyscus_maniculatus_bairdii
ENSSMAG00000006612	pdcd11	99	40.263	ENSPMAG00000003098	pdcd11	99	40.579	Petromyzon_marinus
ENSSMAG00000006612	pdcd11	100	44.276	ENSPCIG00000001118	PDCD11	100	44.107	Phascolarctos_cinereus
ENSSMAG00000006612	pdcd11	100	72.427	ENSPFOG00000006012	pdcd11	100	72.602	Poecilia_formosa
ENSSMAG00000006612	pdcd11	100	65.673	ENSPLAG00000014494	pdcd11	100	65.399	Poecilia_latipinna
ENSSMAG00000006612	pdcd11	100	58.451	ENSPMEG00000018177	pdcd11	98	67.029	Poecilia_mexicana
ENSSMAG00000006612	pdcd11	100	72.064	ENSPREG00000000475	pdcd11	100	72.402	Poecilia_reticulata
ENSSMAG00000006612	pdcd11	99	39.218	ENSPPYG00000002621	PDCD11	99	39.206	Pongo_abelii
ENSSMAG00000006612	pdcd11	63	52.601	ENSPCAG00000011663	PDCD11	65	52.703	Procavia_capensis
ENSSMAG00000006612	pdcd11	99	41.301	ENSPCOG00000023327	PDCD11	99	39.913	Propithecus_coquereli
ENSSMAG00000006612	pdcd11	99	43.819	ENSPVAG00000004176	PDCD11	99	43.856	Pteropus_vampyrus
ENSSMAG00000006612	pdcd11	99	78.158	ENSPNYG00000003979	pdcd11	99	78.041	Pundamilia_nyererei
ENSSMAG00000006612	pdcd11	95	57.699	ENSPNAG00000017225	pdcd11	100	57.699	Pygocentrus_nattereri
ENSSMAG00000006612	pdcd11	99	43.522	ENSRNOG00000020304	Pdcd11	99	43.446	Rattus_norvegicus
ENSSMAG00000006612	pdcd11	99	44.503	ENSRBIG00000011889	PDCD11	99	44.356	Rhinopithecus_bieti
ENSSMAG00000006612	pdcd11	99	44.450	ENSRROG00000030483	PDCD11	99	44.303	Rhinopithecus_roxellana
ENSSMAG00000006612	pdcd11	88	32.759	YMR229C	-	98	32.810	Saccharomyces_cerevisiae
ENSSMAG00000006612	pdcd11	99	44.151	ENSSBOG00000030308	PDCD11	99	43.208	Saimiri_boliviensis_boliviensis
ENSSMAG00000006612	pdcd11	99	43.760	ENSSHAG00000018258	PDCD11	99	44.132	Sarcophilus_harrisii
ENSSMAG00000006612	pdcd11	100	55.982	ENSSFOG00015003881	pdcd11	100	55.684	Scleropages_formosus
ENSSMAG00000006612	pdcd11	99	74.468	ENSSDUG00000021302	pdcd11	99	77.233	Seriola_dumerili
ENSSMAG00000006612	pdcd11	50	82.986	ENSSLDG00000010228	pdcd11	99	82.986	Seriola_lalandi_dorsalis
ENSSMAG00000006612	pdcd11	80	67.347	ENSSARG00000002540	PDCD11	70	67.347	Sorex_araneus
ENSSMAG00000006612	pdcd11	97	80.647	ENSSPAG00000017558	pdcd11	100	80.533	Stegastes_partitus
ENSSMAG00000006612	pdcd11	99	45.132	ENSSSCG00000010599	PDCD11	99	45.283	Sus_scrofa
ENSSMAG00000006612	pdcd11	70	72.827	ENSTRUG00000014291	pdcd11	100	72.827	Takifugu_rubripes
ENSSMAG00000006612	pdcd11	99	71.781	ENSTNIG00000012085	pdcd11	99	71.781	Tetraodon_nigroviridis
ENSSMAG00000006612	pdcd11	96	60.571	ENSTBEG00000001893	PDCD11	96	60.345	Tupaia_belangeri
ENSSMAG00000006612	pdcd11	80	39.136	ENSTTRG00000003356	PDCD11	93	43.612	Tursiops_truncatus
ENSSMAG00000006612	pdcd11	99	44.640	ENSUAMG00000018015	PDCD11	99	44.730	Ursus_americanus
ENSSMAG00000006612	pdcd11	99	43.356	ENSUMAG00000023567	PDCD11	99	43.671	Ursus_maritimus
ENSSMAG00000006612	pdcd11	71	50.549	ENSVPAG00000007405	PDCD11	78	50.549	Vicugna_pacos
ENSSMAG00000006612	pdcd11	99	44.644	ENSVVUG00000004457	PDCD11	99	44.733	Vulpes_vulpes
ENSSMAG00000006612	pdcd11	100	45.584	ENSXETG00000009482	pdcd11	99	45.214	Xenopus_tropicalis
ENSSMAG00000006612	pdcd11	100	61.310	ENSXCOG00000012420	pdcd11	100	61.602	Xiphophorus_couchianus
ENSSMAG00000006612	pdcd11	100	73.198	ENSXMAG00000004638	pdcd11	100	73.525	Xiphophorus_maculatus