EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000006797 (Gene tree)
Gene ID: -
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: growth factor independent 1A transcription repressor a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2250 bases
Position: chr7:13787034-13789283
Accession: ZDB-GENE-050522-534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011028	zf-C2H2	PF00096.26	2.1e-29	1	6
ENSSMAP00000011028	zf-C2H2	PF00096.26	2.1e-29	2	6
ENSSMAP00000011028	zf-C2H2	PF00096.26	2.1e-29	3	6
ENSSMAP00000011028	zf-C2H2	PF00096.26	2.1e-29	4	6
ENSSMAP00000011028	zf-C2H2	PF00096.26	2.1e-29	5	6
ENSSMAP00000011028	zf-C2H2	PF00096.26	2.1e-29	6	6
ENSSMAP00000011028	zf-met	PF12874.7	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000011175	-	1215	-	ENSSMAP00000011028	404 (aa)	-	A0A2U9BJV7

Gene Model

Click here to download ENSSMAG00000006797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000006797	gfi1aa	56	41.791	ENSSMAG00000013663	-	96	43.636
ENSSMAG00000006797	gfi1aa	54	40.580	ENSSMAG00000005081	-	81	40.580
ENSSMAG00000006797	gfi1aa	58	45.161	ENSSMAG00000007561	znf236	65	45.161
ENSSMAG00000006797	gfi1aa	58	42.056	ENSSMAG00000006197	-	94	42.056
ENSSMAG00000006797	gfi1aa	99	49.510	ENSSMAG00000015181	gfi1b	63	74.877
ENSSMAG00000006797	gfi1aa	60	41.216	ENSSMAG00000019980	-	70	41.216
ENSSMAG00000006797	gfi1aa	52	40.000	ENSSMAG00000021271	-	66	40.000
ENSSMAG00000006797	gfi1aa	100	61.765	ENSSMAG00000002782	gfi1ab	100	60.837

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006797	gfi1aa	100	83.292	ENSAPOG00000005043	gfi1aa	100	82.801	Acanthochromis_polyacanthus
ENSSMAG00000006797	gfi1aa	100	79.506	ENSACIG00000021378	gfi1aa	100	79.012	Amphilophus_citrinellus
ENSSMAG00000006797	gfi1aa	100	82.555	ENSAOCG00000022957	gfi1aa	100	82.064	Amphiprion_ocellaris
ENSSMAG00000006797	gfi1aa	100	82.801	ENSAPEG00000014539	gfi1aa	100	82.310	Amphiprion_percula
ENSSMAG00000006797	gfi1aa	100	80.098	ENSATEG00000019026	gfi1aa	99	83.681	Anabas_testudineus
ENSSMAG00000006797	gfi1aa	100	80.788	ENSACLG00000008641	gfi1aa	100	80.296	Astatotilapia_calliptera
ENSSMAG00000006797	gfi1aa	100	60.922	ENSDARG00000020746	gfi1aa	100	59.223	Danio_rerio
ENSSMAG00000006797	gfi1aa	100	79.455	ENSHBUG00000007389	gfi1aa	100	78.960	Haplochromis_burtoni
ENSSMAG00000006797	gfi1aa	100	73.515	ENSKMAG00000002148	gfi1aa	100	73.039	Kryptolebias_marmoratus
ENSSMAG00000006797	gfi1aa	100	78.960	ENSLBEG00000006603	gfi1aa	100	78.218	Labrus_bergylta
ENSSMAG00000006797	gfi1aa	100	77.396	ENSMAMG00000004896	gfi1aa	100	76.658	Mastacembelus_armatus
ENSSMAG00000006797	gfi1aa	100	80.788	ENSMZEG00005004578	gfi1aa	100	80.296	Maylandia_zebra
ENSSMAG00000006797	gfi1aa	83	76.412	ENSMMOG00000006167	gfi1aa	99	75.748	Mola_mola
ENSSMAG00000006797	gfi1aa	100	80.542	ENSNBRG00000002673	gfi1aa	100	80.049	Neolamprologus_brichardi
ENSSMAG00000006797	gfi1aa	100	79.506	ENSPNYG00000002189	gfi1aa	100	79.012	Pundamilia_nyererei
ENSSMAG00000006797	gfi1aa	100	85.258	ENSSDUG00000011654	gfi1aa	100	84.767	Seriola_dumerili
ENSSMAG00000006797	gfi1aa	100	84.653	ENSSLDG00000016512	gfi1aa	100	84.158	Seriola_lalandi_dorsalis
ENSSMAG00000006797	gfi1aa	86	79.370	ENSSPAG00000000927	gfi1aa	94	78.797	Stegastes_partitus
ENSSMAG00000006797	gfi1aa	100	77.206	ENSTRUG00000004744	gfi1aa	100	76.716	Takifugu_rubripes