EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000006815 (Gene tree)
Gene ID: -
Gene Symbol: ARF6
Alias: -
Full Name: ADP ribosylation factor 6
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2035 bases
Position: chr20:7726310-7728344
Accession: 659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011032	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000011179	ARF6-201	1120	-	ENSSMAP00000011032	148 (aa)	-	UPI00001FD4CC

Gene Model

Click here to download ENSSMAG00000006815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000006815	ARF6	95	51.049	ENSSMAG00000012843	-	68	51.049
ENSSMAG00000006815	ARF6	97	44.000	ENSSMAG00000013072	-	77	44.000
ENSSMAG00000006815	ARF6	86	32.117	ENSSMAG00000010140	rab22a	68	32.117
ENSSMAG00000006815	ARF6	100	69.595	ENSSMAG00000002927	-	82	69.595
ENSSMAG00000006815	ARF6	93	48.905	ENSSMAG00000005803	arl3	75	48.905
ENSSMAG00000006815	ARF6	100	69.595	ENSSMAG00000001861	arf3b	82	69.595
ENSSMAG00000006815	ARF6	99	44.667	ENSSMAG00000006539	arl5a	84	44.667
ENSSMAG00000006815	ARF6	99	68.667	ENSSMAG00000006125	-	83	68.667
ENSSMAG00000006815	ARF6	99	56.463	ENSSMAG00000016416	arl1	81	56.463
ENSSMAG00000006815	ARF6	86	30.075	ENSSMAG00000016376	-	66	30.075
ENSSMAG00000006815	ARF6	99	66.667	ENSSMAG00000018796	-	84	66.667
ENSSMAG00000006815	ARF6	85	47.328	ENSSMAG00000015059	arl4aa	73	44.828
ENSSMAG00000006815	ARF6	79	30.709	ENSSMAG00000009229	rab5aa	58	30.709
ENSSMAG00000006815	ARF6	88	36.090	ENSSMAG00000002165	-	66	36.090
ENSSMAG00000006815	ARF6	88	37.594	ENSSMAG00000007106	sar1b	52	37.594
ENSSMAG00000006815	ARF6	92	42.143	ENSSMAG00000021333	ARL6	76	42.143
ENSSMAG00000006815	ARF6	97	37.500	ENSSMAG00000016740	arl8ba	77	37.500
ENSSMAG00000006815	ARF6	91	42.553	ENSSMAG00000017183	-	71	42.553
ENSSMAG00000006815	ARF6	95	36.170	ENSSMAG00000015087	arl8a	75	36.170
ENSSMAG00000006815	ARF6	100	68.243	ENSSMAG00000010770	arf2b	82	68.243
ENSSMAG00000006815	ARF6	95	38.298	ENSSMAG00000015130	arl8bb	76	38.298
ENSSMAG00000006815	ARF6	97	45.890	ENSSMAG00000003002	arl3l2	74	45.890
ENSSMAG00000006815	ARF6	92	36.306	ENSSMAG00000007588	-	77	36.306
ENSSMAG00000006815	ARF6	93	49.275	ENSSMAG00000017643	arl2	74	49.275
ENSSMAG00000006815	ARF6	97	44.218	ENSSMAG00000010552	arl5c	82	44.218
ENSSMAG00000006815	ARF6	84	62.400	ENSSMAG00000002487	-	75	61.905
ENSSMAG00000006815	ARF6	88	43.704	ENSSMAG00000008394	arl4d	68	43.704
ENSSMAG00000006815	ARF6	87	35.766	ENSSMAG00000001351	arfrp1	61	35.766
ENSSMAG00000006815	ARF6	99	44.000	ENSSMAG00000011578	arl8	84	44.000
ENSSMAG00000006815	ARF6	91	41.481	ENSSMAG00000000005	arl11	78	41.481
ENSSMAG00000006815	ARF6	99	64.626	ENSSMAG00000004541	-	82	64.626
ENSSMAG00000006815	ARF6	95	46.452	ENSSMAG00000014218	-	77	46.452
ENSSMAG00000006815	ARF6	100	64.865	ENSSMAG00000011361	arf5	87	64.865
ENSSMAG00000006815	ARF6	77	34.746	ENSSMAG00000020758	sar1ab	83	34.746
ENSSMAG00000006815	ARF6	97	44.295	ENSSMAG00000016399	arl4cb	78	44.295

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006815	ARF6	100	97.368	ENSAPLG00000001640	ARF6	85	97.368	Anas_platyrhynchos
ENSSMAG00000006815	ARF6	100	99.324	ENSACAG00000001335	ARF6	85	99.324	Anolis_carolinensis
ENSSMAG00000006815	ARF6	95	98.582	ENSLBEG00000024782	ARF6	77	98.582	Labrus_bergylta
ENSSMAG00000006815	ARF6	100	100.000	ENSMFAG00000001534	ARF6	100	100.000	Macaca_fascicularis
ENSSMAG00000006815	ARF6	100	100.000	ENSMNEG00000035341	ARF6	100	100.000	Macaca_nemestrina
ENSSMAG00000006815	ARF6	97	70.548	ENSPMAG00000010222	ARF6	81	70.548	Petromyzon_marinus
ENSSMAG00000006815	ARF6	93	99.270	ENSPVAG00000017937	ARF6	100	99.270	Pteropus_vampyrus
ENSSMAG00000006815	ARF6	100	100.000	ENSSSCG00000005012	ARF6	100	100.000	Sus_scrofa
ENSSMAG00000006815	ARF6	100	96.622	ENSTNIG00000019582	arf6b	85	96.622	Tetraodon_nigroviridis
ENSSMAG00000006815	ARF6	100	100.000	ENSUMAG00000007345	ARF6	98	100.000	Ursus_maritimus
ENSSMAG00000006815	ARF6	100	100.000	ENSVVUG00000029816	ARF6	90	100.000	Vulpes_vulpes