EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000006837 (Gene tree)
Gene ID: -
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b%2C subunit 4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4965 bases
Position: chr22:7709220-7714184
Accession: ZDB-GENE-020419-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011070	RRM_1	PF00076.22	3.1e-39	1	2
ENSSMAP00000011070	RRM_1	PF00076.22	3.1e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000011217	-	2314	-	ENSSMAP00000011070	400 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000006837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000006837	sf3b4	80	39.773	ENSSMAG00000010516	pabpc1l	85	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006837	sf3b4	77	82.132	ENSG00000143368	SF3B4	89	100.000	Homo_sapiens
ENSSMAG00000006837	sf3b4	60	96.667	ENSAMEG00000010073	SF3B4	57	96.667	Ailuropoda_melanoleuca
ENSSMAG00000006837	sf3b4	60	97.059	ENSACIG00000018455	sf3b4	67	98.673	Amphilophus_citrinellus
ENSSMAG00000006837	sf3b4	68	97.778	ENSATEG00000012844	sf3b4	85	93.567	Anabas_testudineus
ENSSMAG00000006837	sf3b4	54	100.000	ENSACAG00000010019	SF3B4	54	99.115	Anolis_carolinensis
ENSSMAG00000006837	sf3b4	77	82.132	ENSANAG00000031025	SF3B4	57	96.667	Aotus_nancymaae
ENSSMAG00000006837	sf3b4	67	95.865	ENSACLG00000014260	sf3b4	85	92.962	Astatotilapia_calliptera
ENSSMAG00000006837	sf3b4	60	97.083	ENSAMXG00000008282	sf3b4	75	90.000	Astyanax_mexicanus
ENSSMAG00000006837	sf3b4	54	94.860	ENSBTAG00000012793	-	53	94.860	Bos_taurus
ENSSMAG00000006837	sf3b4	60	96.667	ENSBTAG00000012495	SF3B4	57	96.667	Bos_taurus
ENSSMAG00000006837	sf3b4	60	96.667	ENSCAFG00000011617	SF3B4	57	96.667	Canis_familiaris
ENSSMAG00000006837	sf3b4	60	96.667	ENSCAFG00020019775	SF3B4	57	96.667	Canis_lupus_dingo
ENSSMAG00000006837	sf3b4	60	96.667	ENSCHIG00000025663	-	57	96.667	Capra_hircus
ENSSMAG00000006837	sf3b4	77	82.132	ENSTSYG00000009295	SF3B4	57	96.667	Carlito_syrichta
ENSSMAG00000006837	sf3b4	60	96.667	ENSCPOG00000008267	SF3B4	57	96.667	Cavia_porcellus
ENSSMAG00000006837	sf3b4	77	82.132	ENSCATG00000033114	SF3B4	57	96.667	Cercocebus_atys
ENSSMAG00000006837	sf3b4	60	96.667	ENSCLAG00000015851	SF3B4	57	96.667	Chinchilla_lanigera
ENSSMAG00000006837	sf3b4	77	82.132	ENSCSAG00000018129	SF3B4	57	96.667	Chlorocebus_sabaeus
ENSSMAG00000006837	sf3b4	54	100.000	ENSCPBG00000008041	SF3B4	54	99.115	Chrysemys_picta_bellii
ENSSMAG00000006837	sf3b4	57	87.665	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSSMAG00000006837	sf3b4	52	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSSMAG00000006837	sf3b4	77	82.132	ENSCANG00000035579	SF3B4	57	96.667	Colobus_angolensis_palliatus
ENSSMAG00000006837	sf3b4	60	96.667	ENSCGRG00001003590	Sf3b4	57	96.667	Cricetulus_griseus_chok1gshd
ENSSMAG00000006837	sf3b4	60	96.667	ENSCGRG00000016914	Sf3b4	57	96.667	Cricetulus_griseus_crigri
ENSSMAG00000006837	sf3b4	75	92.715	ENSCSEG00000015258	sf3b4	71	93.605	Cynoglossus_semilaevis
ENSSMAG00000006837	sf3b4	67	95.865	ENSCVAG00000005536	sf3b4	76	90.604	Cyprinodon_variegatus
ENSSMAG00000006837	sf3b4	60	97.917	ENSDARG00000018574	sf3b4	81	91.925	Danio_rerio
ENSSMAG00000006837	sf3b4	58	91.379	ENSDNOG00000048908	-	56	91.379	Dasypus_novemcinctus
ENSSMAG00000006837	sf3b4	97	64.824	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSSMAG00000006837	sf3b4	60	96.667	ENSDORG00000016366	Sf3b4	57	96.667	Dipodomys_ordii
ENSSMAG00000006837	sf3b4	57	87.719	ENSETEG00000008963	SF3B4	50	89.100	Echinops_telfairi
ENSSMAG00000006837	sf3b4	60	96.667	ENSEASG00005001477	SF3B4	57	96.667	Equus_asinus_asinus
ENSSMAG00000006837	sf3b4	60	96.667	ENSECAG00000024737	SF3B4	57	96.667	Equus_caballus
ENSSMAG00000006837	sf3b4	87	90.286	ENSELUG00000012876	sf3b4	74	93.311	Esox_lucius
ENSSMAG00000006837	sf3b4	60	96.667	ENSFCAG00000010106	SF3B4	57	96.667	Felis_catus
ENSSMAG00000006837	sf3b4	60	96.667	ENSFDAG00000009286	SF3B4	57	96.667	Fukomys_damarensis
ENSSMAG00000006837	sf3b4	58	98.696	ENSGMOG00000002519	sf3b4	66	99.115	Gadus_morhua
ENSSMAG00000006837	sf3b4	54	100.000	ENSGALG00000013352	SF3B4	54	99.115	Gallus_gallus
ENSSMAG00000006837	sf3b4	76	93.770	ENSGAFG00000010181	sf3b4	77	93.770	Gambusia_affinis
ENSSMAG00000006837	sf3b4	59	99.576	ENSGACG00000003819	sf3b4	100	89.277	Gasterosteus_aculeatus
ENSSMAG00000006837	sf3b4	77	69.649	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSSMAG00000006837	sf3b4	77	82.132	ENSGGOG00000004761	SF3B4	57	96.667	Gorilla_gorilla
ENSSMAG00000006837	sf3b4	67	95.865	ENSHBUG00000002028	sf3b4	85	92.962	Haplochromis_burtoni
ENSSMAG00000006837	sf3b4	60	96.667	ENSHGLG00000012360	SF3B4	57	96.667	Heterocephalus_glaber_female
ENSSMAG00000006837	sf3b4	60	96.667	ENSHGLG00100008533	SF3B4	57	96.667	Heterocephalus_glaber_male
ENSSMAG00000006837	sf3b4	99	84.615	ENSHCOG00000003014	sf3b4	85	85.673	Hippocampus_comes
ENSSMAG00000006837	sf3b4	60	98.333	ENSIPUG00000012242	Sf3b4	75	91.000	Ictalurus_punctatus
ENSSMAG00000006837	sf3b4	60	96.667	ENSSTOG00000000684	-	57	96.667	Ictidomys_tridecemlineatus
ENSSMAG00000006837	sf3b4	59	70.946	ENSJJAG00000022500	Sf3b4	59	71.429	Jaculus_jaculus
ENSSMAG00000006837	sf3b4	67	96.642	ENSKMAG00000008154	sf3b4	76	91.946	Kryptolebias_marmoratus
ENSSMAG00000006837	sf3b4	58	98.712	ENSLBEG00000026818	sf3b4	100	87.531	Labrus_bergylta
ENSSMAG00000006837	sf3b4	60	95.000	ENSLACG00000004436	SF3B4	66	95.000	Latimeria_chalumnae
ENSSMAG00000006837	sf3b4	58	98.707	ENSLOCG00000009048	sf3b4	54	100.000	Lepisosteus_oculatus
ENSSMAG00000006837	sf3b4	77	79.876	ENSLAFG00000008531	SF3B4	56	96.667	Loxodonta_africana
ENSSMAG00000006837	sf3b4	94	60.158	ENSMFAG00000039067	-	53	79.899	Macaca_fascicularis
ENSSMAG00000006837	sf3b4	77	82.132	ENSMFAG00000042395	SF3B4	57	96.667	Macaca_fascicularis
ENSSMAG00000006837	sf3b4	77	82.132	ENSMMUG00000007256	SF3B4	57	96.667	Macaca_mulatta
ENSSMAG00000006837	sf3b4	94	59.631	ENSMNEG00000031526	-	53	79.500	Macaca_nemestrina
ENSSMAG00000006837	sf3b4	77	82.132	ENSMNEG00000031839	SF3B4	57	96.667	Macaca_nemestrina
ENSSMAG00000006837	sf3b4	77	82.132	ENSMLEG00000038667	SF3B4	57	96.667	Mandrillus_leucophaeus
ENSSMAG00000006837	sf3b4	60	97.500	ENSMAMG00000014692	sf3b4	86	91.813	Mastacembelus_armatus
ENSSMAG00000006837	sf3b4	67	95.865	ENSMZEG00005026741	sf3b4	85	92.962	Maylandia_zebra
ENSSMAG00000006837	sf3b4	54	100.000	ENSMGAG00000000653	SF3B4	54	99.115	Meleagris_gallopavo
ENSSMAG00000006837	sf3b4	60	96.667	ENSMAUG00000015266	Sf3b4	57	96.667	Mesocricetus_auratus
ENSSMAG00000006837	sf3b4	60	96.667	ENSMICG00000044961	SF3B4	57	96.667	Microcebus_murinus
ENSSMAG00000006837	sf3b4	92	71.244	ENSMOCG00000014155	-	57	94.372	Microtus_ochrogaster
ENSSMAG00000006837	sf3b4	60	96.667	ENSMOCG00000013658	-	57	96.667	Microtus_ochrogaster
ENSSMAG00000006837	sf3b4	59	98.729	ENSMMOG00000018032	sf3b4	100	84.040	Mola_mola
ENSSMAG00000006837	sf3b4	77	82.132	ENSMODG00000018767	SF3B4	57	96.667	Monodelphis_domestica
ENSSMAG00000006837	sf3b4	67	95.167	ENSMALG00000006174	sf3b4	85	90.936	Monopterus_albus
ENSSMAG00000006837	sf3b4	60	96.667	MGP_CAROLIEiJ_G0025365	Sf3b4	57	96.667	Mus_caroli
ENSSMAG00000006837	sf3b4	60	96.667	ENSMUSG00000068856	Sf3b4	57	96.667	Mus_musculus
ENSSMAG00000006837	sf3b4	60	96.667	MGP_PahariEiJ_G0026809	Sf3b4	57	96.667	Mus_pahari
ENSSMAG00000006837	sf3b4	60	96.667	MGP_SPRETEiJ_G0026309	Sf3b4	57	96.667	Mus_spretus
ENSSMAG00000006837	sf3b4	60	96.667	ENSMPUG00000005563	SF3B4	57	96.667	Mustela_putorius_furo
ENSSMAG00000006837	sf3b4	60	96.667	ENSMLUG00000010789	SF3B4	57	96.667	Myotis_lucifugus
ENSSMAG00000006837	sf3b4	77	82.132	ENSNGAG00000016337	Sf3b4	57	96.667	Nannospalax_galili
ENSSMAG00000006837	sf3b4	67	96.617	ENSNBRG00000013865	sf3b4	99	89.776	Neolamprologus_brichardi
ENSSMAG00000006837	sf3b4	99	63.391	ENSNLEG00000000537	-	54	90.094	Nomascus_leucogenys
ENSSMAG00000006837	sf3b4	57	93.421	ENSOPRG00000010808	SF3B4	50	95.261	Ochotona_princeps
ENSSMAG00000006837	sf3b4	91	57.895	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSSMAG00000006837	sf3b4	75	69.231	ENSODEG00000003597	-	59	80.498	Octodon_degus
ENSSMAG00000006837	sf3b4	67	95.489	ENSONIG00000002730	sf3b4	99	89.356	Oreochromis_niloticus
ENSSMAG00000006837	sf3b4	60	96.667	ENSOCUG00000004614	SF3B4	57	96.667	Oryctolagus_cuniculus
ENSSMAG00000006837	sf3b4	75	91.060	ENSORLG00000003062	sf3b4	77	83.667	Oryzias_latipes
ENSSMAG00000006837	sf3b4	75	91.060	ENSORLG00020000687	sf3b4	75	83.667	Oryzias_latipes_hni
ENSSMAG00000006837	sf3b4	75	91.060	ENSORLG00015010989	sf3b4	75	83.667	Oryzias_latipes_hsok
ENSSMAG00000006837	sf3b4	58	98.276	ENSOMEG00000013694	sf3b4	75	88.704	Oryzias_melastigma
ENSSMAG00000006837	sf3b4	60	96.667	ENSOGAG00000006265	SF3B4	57	96.667	Otolemur_garnettii
ENSSMAG00000006837	sf3b4	60	96.667	ENSOARG00000020718	-	57	96.667	Ovis_aries
ENSSMAG00000006837	sf3b4	73	71.672	ENSOARG00000007368	-	51	83.092	Ovis_aries
ENSSMAG00000006837	sf3b4	77	82.132	ENSPPAG00000040904	SF3B4	57	96.667	Pan_paniscus
ENSSMAG00000006837	sf3b4	77	76.358	ENSPPAG00000030024	-	59	86.667	Pan_paniscus
ENSSMAG00000006837	sf3b4	60	96.667	ENSPPRG00000007384	SF3B4	57	96.667	Panthera_pardus
ENSSMAG00000006837	sf3b4	60	96.667	ENSPTIG00000014530	SF3B4	57	96.667	Panthera_tigris_altaica
ENSSMAG00000006837	sf3b4	77	76.948	ENSPTRG00000049727	-	60	87.083	Pan_troglodytes
ENSSMAG00000006837	sf3b4	77	82.132	ENSPTRG00000001243	SF3B4	57	96.667	Pan_troglodytes
ENSSMAG00000006837	sf3b4	77	82.132	ENSPANG00000005126	SF3B4	57	96.667	Papio_anubis
ENSSMAG00000006837	sf3b4	61	98.765	ENSPKIG00000020669	sf3b4	94	86.842	Paramormyrops_kingsleyae
ENSSMAG00000006837	sf3b4	66	77.567	ENSPSIG00000009565	SF3B4	67	98.907	Pelodiscus_sinensis
ENSSMAG00000006837	sf3b4	60	96.667	ENSPEMG00000017568	Sf3b4	57	96.667	Peromyscus_maniculatus_bairdii
ENSSMAG00000006837	sf3b4	53	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSSMAG00000006837	sf3b4	77	82.132	ENSPCIG00000008765	SF3B4	57	96.667	Phascolarctos_cinereus
ENSSMAG00000006837	sf3b4	67	96.642	ENSPFOG00000005754	sf3b4	76	93.624	Poecilia_formosa
ENSSMAG00000006837	sf3b4	67	96.642	ENSPLAG00000001401	sf3b4	82	93.624	Poecilia_latipinna
ENSSMAG00000006837	sf3b4	67	96.642	ENSPREG00000011076	sf3b4	65	96.947	Poecilia_reticulata
ENSSMAG00000006837	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSSMAG00000006837	sf3b4	60	96.667	ENSPCOG00000015399	SF3B4	57	96.667	Propithecus_coquereli
ENSSMAG00000006837	sf3b4	60	96.667	ENSPVAG00000014171	SF3B4	57	96.667	Pteropus_vampyrus
ENSSMAG00000006837	sf3b4	67	95.865	ENSPNYG00000012700	sf3b4	85	92.962	Pundamilia_nyererei
ENSSMAG00000006837	sf3b4	60	97.917	ENSPNAG00000000686	sf3b4	77	90.000	Pygocentrus_nattereri
ENSSMAG00000006837	sf3b4	60	96.667	ENSRNOG00000021181	Sf3b4	57	96.667	Rattus_norvegicus
ENSSMAG00000006837	sf3b4	77	82.132	ENSRBIG00000043392	SF3B4	57	96.667	Rhinopithecus_bieti
ENSSMAG00000006837	sf3b4	92	59.474	ENSRROG00000028213	-	51	75.000	Rhinopithecus_roxellana
ENSSMAG00000006837	sf3b4	77	82.132	ENSRROG00000029366	SF3B4	57	96.667	Rhinopithecus_roxellana
ENSSMAG00000006837	sf3b4	77	81.818	ENSSBOG00000012310	-	57	96.250	Saimiri_boliviensis_boliviensis
ENSSMAG00000006837	sf3b4	74	78.964	ENSSHAG00000004043	SF3B4	56	92.083	Sarcophilus_harrisii
ENSSMAG00000006837	sf3b4	61	97.942	ENSSFOG00015008864	sf3b4	84	90.379	Scleropages_formosus
ENSSMAG00000006837	sf3b4	67	98.120	ENSSDUG00000012064	sf3b4	100	90.819	Seriola_dumerili
ENSSMAG00000006837	sf3b4	67	98.872	ENSSLDG00000014226	sf3b4	100	91.315	Seriola_lalandi_dorsalis
ENSSMAG00000006837	sf3b4	60	99.167	ENSSPAG00000019219	sf3b4	100	89.826	Stegastes_partitus
ENSSMAG00000006837	sf3b4	77	80.124	ENSSSCG00000006665	-	57	96.667	Sus_scrofa
ENSSMAG00000006837	sf3b4	59	97.034	ENSTGUG00000004470	SF3B4	83	100.000	Taeniopygia_guttata
ENSSMAG00000006837	sf3b4	80	91.824	ENSTRUG00000004516	sf3b4	74	91.611	Takifugu_rubripes
ENSSMAG00000006837	sf3b4	67	95.489	ENSTNIG00000009156	sf3b4	75	86.957	Tetraodon_nigroviridis
ENSSMAG00000006837	sf3b4	60	96.667	ENSTTRG00000005217	SF3B4	57	96.667	Tursiops_truncatus
ENSSMAG00000006837	sf3b4	60	96.667	ENSUAMG00000022468	SF3B4	57	96.667	Ursus_americanus
ENSSMAG00000006837	sf3b4	60	96.667	ENSUMAG00000003802	SF3B4	57	96.667	Ursus_maritimus
ENSSMAG00000006837	sf3b4	57	96.491	ENSVPAG00000008152	SF3B4	55	96.491	Vicugna_pacos
ENSSMAG00000006837	sf3b4	76	77.961	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSSMAG00000006837	sf3b4	67	97.015	ENSXCOG00000019895	sf3b4	76	93.960	Xiphophorus_couchianus
ENSSMAG00000006837	sf3b4	67	96.992	ENSXMAG00000003772	sf3b4	76	94.295	Xiphophorus_maculatus