EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000006869 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1b
Alias
-
Full Name
poly A binding protein%2C cytoplasmic 1 b
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
11159 bases
Position
chr22:7726956-7738114
Accession
ZDB-GENE-050308-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000011151PABPPF00658.183.8e-3111
ENSSMAP00000011170PABPPF00658.183.8e-3111
ENSSMAP00000011151RRM_5PF13893.61.4e-0812
ENSSMAP00000011151RRM_5PF13893.61.4e-0822
ENSSMAP00000011170RRM_5PF13893.63.9e-0812
ENSSMAP00000011170RRM_5PF13893.63.9e-0822
ENSSMAP00000011151RRM_1PF00076.221.4e-8914
ENSSMAP00000011151RRM_1PF00076.221.4e-8924
ENSSMAP00000011151RRM_1PF00076.221.4e-8934
ENSSMAP00000011151RRM_1PF00076.221.4e-8944
ENSSMAP00000011170RRM_1PF00076.222e-8714
ENSSMAP00000011170RRM_1PF00076.222e-8724
ENSSMAP00000011170RRM_1PF00076.222e-8734
ENSSMAP00000011170RRM_1PF00076.222e-8744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000011298-5035-ENSSMAP00000011151634 (aa)-A0A2U9D0W6
ENSSMAT00000011317-1905-ENSSMAP00000011170634 (aa)-A0A2U9CY90
Gene Model
Click here to download ENSSMAG00000006869's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006869's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000006869pabpc1b5637.333ENSSMAG00000011828rbm195737.333
ENSSMAG00000006869pabpc1b5731.868ENSSMAG00000014353-8831.868
ENSSMAG00000006869pabpc1b5731.148ENSSMAG00000011347tia1l9331.148
ENSSMAG00000006869pabpc1b9975.197ENSSMAG00000009007pabpc49975.671
ENSSMAG00000006869pabpc1b10088.871ENSSMAG00000010803pabpc1a10088.871
ENSSMAG00000006869pabpc1b5937.349ENSSMAG00000010745ELAVL28537.349
ENSSMAG00000006869pabpc1b5830.556ENSSMAG00000012671tial18430.556
ENSSMAG00000006869pabpc1b6037.349ENSSMAG00000009331celf47237.349
ENSSMAG00000006869pabpc1b6031.818ENSSMAG00000021241ncl5031.548
ENSSMAG00000006869pabpc1b9869.352ENSSMAG00000010516pabpc1l9883.824
ENSSMAG00000006869pabpc1b5932.632ENSSMAG00000020065-6632.632
ENSSMAG00000006869pabpc1b5937.349ENSSMAG00000004671elavl39237.349
ENSSMAG00000006869pabpc1b5732.530ENSSMAG00000008985-6532.530
ENSSMAG00000006869pabpc1b5936.145ENSSMAG00000006881elavl48436.145
ENSSMAG00000006869pabpc1b5930.108ENSSMAG00000020230-7430.108
ENSSMAG00000006869pabpc1b5134.884ENSSMAG00000008925-5034.884
ENSSMAG00000006869pabpc1b5334.091ENSSMAG00000013827celf16234.091
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000006869pabpc1b5879.082ENSG00000184388PABPC1L2B9879.082Homo_sapiens
ENSSMAG00000006869pabpc1b5879.082ENSG00000186288PABPC1L2A9879.082Homo_sapiens
ENSSMAG00000006869pabpc1b10088.871ENSAPOG00000015105pabpc1a10088.871Acanthochromis_polyacanthus
ENSSMAG00000006869pabpc1b10096.688ENSAPOG00000017776pabpc1b10096.688Acanthochromis_polyacanthus
ENSSMAG00000006869pabpc1b5979.082ENSAMEG00000019441-9879.082Ailuropoda_melanoleuca
ENSSMAG00000006869pabpc1b10090.709ENSACIG00000018366pabpc1b10090.709Amphilophus_citrinellus
ENSSMAG00000006869pabpc1b10089.028ENSACIG00000004685pabpc1a10088.871Amphilophus_citrinellus
ENSSMAG00000006869pabpc1b10088.558ENSAOCG00000011656pabpc1a10088.715Amphiprion_ocellaris
ENSSMAG00000006869pabpc1b10096.215ENSAOCG00000019839pabpc1b10096.215Amphiprion_ocellaris
ENSSMAG00000006869pabpc1b10088.558ENSAPEG00000006963pabpc1a10088.715Amphiprion_percula
ENSSMAG00000006869pabpc1b10096.215ENSAPEG00000010435pabpc1b10096.215Amphiprion_percula
ENSSMAG00000006869pabpc1b10088.558ENSATEG00000024852pabpc1a10088.715Anabas_testudineus
ENSSMAG00000006869pabpc1b10095.912ENSATEG00000012917pabpc1b10095.912Anabas_testudineus
ENSSMAG00000006869pabpc1b5879.082ENSANAG00000019431-9879.082Aotus_nancymaae
ENSSMAG00000006869pabpc1b5879.082ENSANAG00000019429-9879.082Aotus_nancymaae
ENSSMAG00000006869pabpc1b10094.795ENSACLG00000014335pabpc1b10094.795Astatotilapia_calliptera
ENSSMAG00000006869pabpc1b10089.028ENSACLG00000009399pabpc1a10088.871Astatotilapia_calliptera
ENSSMAG00000006869pabpc1b10094.331ENSAMXG00000008599pabpc1b10094.331Astyanax_mexicanus
ENSSMAG00000006869pabpc1b5978.049ENSBTAG00000050902-9878.049Bos_taurus
ENSSMAG00000006869pabpc1b5976.077ENSBTAG00000052491-9876.077Bos_taurus
ENSSMAG00000006869pabpc1b5879.082ENSCJAG00000041326-9879.082Callithrix_jacchus
ENSSMAG00000006869pabpc1b5978.049ENSCAFG00020002052-9878.049Canis_lupus_dingo
ENSSMAG00000006869pabpc1b5879.082ENSCHIG00000011138-9879.082Capra_hircus
ENSSMAG00000006869pabpc1b5879.082ENSCHIG00000006283-9879.082Capra_hircus
ENSSMAG00000006869pabpc1b5879.082ENSTSYG00000001775-9879.082Carlito_syrichta
ENSSMAG00000006869pabpc1b5979.082ENSCPOG00000009525-9879.082Cavia_porcellus
ENSSMAG00000006869pabpc1b5879.082ENSCCAG00000031524-9879.082Cebus_capucinus
ENSSMAG00000006869pabpc1b5879.082ENSCATG00000043125-9879.082Cercocebus_atys
ENSSMAG00000006869pabpc1b5879.082ENSCATG00000042826-9879.082Cercocebus_atys
ENSSMAG00000006869pabpc1b5878.061ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSSMAG00000006869pabpc1b5878.061ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSSMAG00000006869pabpc1b5979.082ENSCSAG00000000102-9879.082Chlorocebus_sabaeus
ENSSMAG00000006869pabpc1b5879.558ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSSMAG00000006869pabpc1b9989.206ENSCSEG00000013324pabpc1a9989.365Cynoglossus_semilaevis
ENSSMAG00000006869pabpc1b10091.483ENSCSEG00000015241-10091.483Cynoglossus_semilaevis
ENSSMAG00000006869pabpc1b10092.913ENSCVAG00000005489pabpc1b10092.913Cyprinodon_variegatus
ENSSMAG00000006869pabpc1b10088.558ENSCVAG00000021872pabpc1a10088.401Cyprinodon_variegatus
ENSSMAG00000006869pabpc1b9990.333ENSDARG00000017219pabpc1a9990.491Danio_rerio
ENSSMAG00000006869pabpc1b10093.386ENSDARG00000021140pabpc1b10094.173Danio_rerio
ENSSMAG00000006869pabpc1b5979.894ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSSMAG00000006869pabpc1b5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSSMAG00000006869pabpc1b5977.670ENSEASG00005010399-9877.670Equus_asinus_asinus
ENSSMAG00000006869pabpc1b5977.670ENSECAG00000002620-9877.670Equus_caballus
ENSSMAG00000006869pabpc1b5974.490ENSEEUG00000008203-9874.490Erinaceus_europaeus
ENSSMAG00000006869pabpc1b9990.694ENSELUG00000003614pabpc1a9990.536Esox_lucius
ENSSMAG00000006869pabpc1b9991.627ENSELUG00000015062-9991.627Esox_lucius
ENSSMAG00000006869pabpc1b5959.914ENSELUG00000005389-9759.914Esox_lucius
ENSSMAG00000006869pabpc1b5879.082ENSFCAG00000039701-9879.082Felis_catus
ENSSMAG00000006869pabpc1b5979.082ENSFDAG00000005484-9879.082Fukomys_damarensis
ENSSMAG00000006869pabpc1b10088.401ENSFHEG00000018979pabpc1a10088.558Fundulus_heteroclitus
ENSSMAG00000006869pabpc1b10093.375ENSFHEG00000008186pabpc1b10093.375Fundulus_heteroclitus
ENSSMAG00000006869pabpc1b9988.509ENSGMOG00000013448pabpc1a9988.509Gadus_morhua
ENSSMAG00000006869pabpc1b9984.615ENSGMOG00000002448-9984.615Gadus_morhua
ENSSMAG00000006869pabpc1b10088.401ENSGAFG00000019750pabpc1a10088.558Gambusia_affinis
ENSSMAG00000006869pabpc1b10094.479ENSGAFG00000010193pabpc1b10094.479Gambusia_affinis
ENSSMAG00000006869pabpc1b10089.498ENSGACG00000003572pabpc1a10089.498Gasterosteus_aculeatus
ENSSMAG00000006869pabpc1b10092.679ENSGACG00000003771pabpc1b10092.991Gasterosteus_aculeatus
ENSSMAG00000006869pabpc1b5879.082ENSGGOG00000043933-9879.082Gorilla_gorilla
ENSSMAG00000006869pabpc1b5879.082ENSGGOG00000038606-9879.082Gorilla_gorilla
ENSSMAG00000006869pabpc1b10094.795ENSHBUG00000002075pabpc1b10094.795Haplochromis_burtoni
ENSSMAG00000006869pabpc1b10089.028ENSHBUG00000020487pabpc1a10088.871Haplochromis_burtoni
ENSSMAG00000006869pabpc1b5879.082ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSSMAG00000006869pabpc1b5879.082ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSSMAG00000006869pabpc1b5879.082ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSSMAG00000006869pabpc1b10088.401ENSHCOG00000013502pabpc1a10088.558Hippocampus_comes
ENSSMAG00000006869pabpc1b9871.176ENSHCOG00000003175pabpc1b9971.290Hippocampus_comes
ENSSMAG00000006869pabpc1b10086.457ENSIPUG00000010791-10086.457Ictalurus_punctatus
ENSSMAG00000006869pabpc1b9987.460ENSIPUG00000008848pabpc1a9987.460Ictalurus_punctatus
ENSSMAG00000006869pabpc1b7454.071ENSIPUG00000021244-6056.854Ictalurus_punctatus
ENSSMAG00000006869pabpc1b7453.731ENSIPUG00000018724-7653.731Ictalurus_punctatus
ENSSMAG00000006869pabpc1b5979.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSSMAG00000006869pabpc1b5979.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSSMAG00000006869pabpc1b5878.571ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSSMAG00000006869pabpc1b10088.871ENSKMAG00000000605pabpc1a10088.715Kryptolebias_marmoratus
ENSSMAG00000006869pabpc1b9993.661ENSKMAG00000008049pabpc1b10093.978Kryptolebias_marmoratus
ENSSMAG00000006869pabpc1b10095.268ENSLBEG00000026845pabpc1b10095.268Labrus_bergylta
ENSSMAG00000006869pabpc1b10089.185ENSLBEG00000024002-10089.185Labrus_bergylta
ENSSMAG00000006869pabpc1b5978.462ENSLAFG00000023096-9878.462Loxodonta_africana
ENSSMAG00000006869pabpc1b5878.680ENSMFAG00000028878-9878.680Macaca_fascicularis
ENSSMAG00000006869pabpc1b5879.082ENSMMUG00000009740-9879.082Macaca_mulatta
ENSSMAG00000006869pabpc1b5879.082ENSMMUG00000037681-9879.082Macaca_mulatta
ENSSMAG00000006869pabpc1b5879.082ENSMMUG00000039929-9879.082Macaca_mulatta
ENSSMAG00000006869pabpc1b5879.082ENSMNEG00000037732-9879.082Macaca_nemestrina
ENSSMAG00000006869pabpc1b5879.082ENSMLEG00000027495-9879.082Mandrillus_leucophaeus
ENSSMAG00000006869pabpc1b10088.245ENSMAMG00000004502-10088.401Mastacembelus_armatus
ENSSMAG00000006869pabpc1b10095.584ENSMAMG00000014610pabpc1b10095.584Mastacembelus_armatus
ENSSMAG00000006869pabpc1b10089.028ENSMZEG00005025416pabpc1a10088.871Maylandia_zebra
ENSSMAG00000006869pabpc1b10094.795ENSMZEG00005026745pabpc1b10094.795Maylandia_zebra
ENSSMAG00000006869pabpc1b5879.082ENSMICG00000047642-9879.082Microcebus_murinus
ENSSMAG00000006869pabpc1b10086.936ENSMMOG00000018044pabpc1a10087.416Mola_mola
ENSSMAG00000006869pabpc1b10088.486ENSMMOG00000018009pabpc1b10088.486Mola_mola
ENSSMAG00000006869pabpc1b9966.456ENSMODG00000015024-9966.456Monodelphis_domestica
ENSSMAG00000006869pabpc1b9873.089ENSMODG00000013156-9873.248Monodelphis_domestica
ENSSMAG00000006869pabpc1b10088.245ENSMALG00000013020-10088.558Monopterus_albus
ENSSMAG00000006869pabpc1b10088.644ENSMALG00000006066pabpc1b10088.801Monopterus_albus
ENSSMAG00000006869pabpc1b5881.421ENSNGAG00000012688-9878.571Nannospalax_galili
ENSSMAG00000006869pabpc1b10089.185ENSNBRG00000003068-10089.028Neolamprologus_brichardi
ENSSMAG00000006869pabpc1b10094.795ENSNBRG00000013737pabpc1b10094.795Neolamprologus_brichardi
ENSSMAG00000006869pabpc1b5879.082ENSNLEG00000018128-9879.082Nomascus_leucogenys
ENSSMAG00000006869pabpc1b5878.571ENSODEG00000018540-9878.571Octodon_degus
ENSSMAG00000006869pabpc1b10088.871ENSONIG00000006871-10088.715Oreochromis_niloticus
ENSSMAG00000006869pabpc1b10094.479ENSONIG00000002717pabpc1b10094.479Oreochromis_niloticus
ENSSMAG00000006869pabpc1b5979.082ENSOCUG00000002565-9879.082Oryctolagus_cuniculus
ENSSMAG00000006869pabpc1b9986.465ENSORLG00000003008-9986.306Oryzias_latipes
ENSSMAG00000006869pabpc1b9992.637ENSORLG00000002691pabpc1a10092.637Oryzias_latipes
ENSSMAG00000006869pabpc1b10085.804ENSORLG00020022259-10085.647Oryzias_latipes_hni
ENSSMAG00000006869pabpc1b10088.088ENSORLG00020022398pabpc1a10088.245Oryzias_latipes_hni
ENSSMAG00000006869pabpc1b10087.931ENSORLG00015013633pabpc110088.088Oryzias_latipes_hsok
ENSSMAG00000006869pabpc1b10086.120ENSORLG00015010932-10085.962Oryzias_latipes_hsok
ENSSMAG00000006869pabpc1b9983.295ENSOMEG00000013627pabpc1b10083.295Oryzias_melastigma
ENSSMAG00000006869pabpc1b10088.245ENSOMEG00000020219pabpc1a10088.401Oryzias_melastigma
ENSSMAG00000006869pabpc1b5979.082ENSOGAG00000029513-9879.082Otolemur_garnettii
ENSSMAG00000006869pabpc1b5979.082ENSOGAG00000026047-9879.082Otolemur_garnettii
ENSSMAG00000006869pabpc1b5979.082ENSOARG00000005943-9879.082Ovis_aries
ENSSMAG00000006869pabpc1b5879.082ENSPPAG00000012920-9879.082Pan_paniscus
ENSSMAG00000006869pabpc1b5979.082ENSPPRG00000011804-9879.082Panthera_pardus
ENSSMAG00000006869pabpc1b5979.082ENSPPRG00000011809-9879.082Panthera_pardus
ENSSMAG00000006869pabpc1b5879.082ENSPTRG00000028252-9879.082Pan_troglodytes
ENSSMAG00000006869pabpc1b5879.082ENSPANG00000011549-9879.082Papio_anubis
ENSSMAG00000006869pabpc1b10094.961ENSPKIG00000005676pabpc1b10094.803Paramormyrops_kingsleyae
ENSSMAG00000006869pabpc1b7094.395ENSPMGG00000023134-9794.395Periophthalmus_magnuspinnatus
ENSSMAG00000006869pabpc1b7091.704ENSPMGG00000022487pabpc1a9291.704Periophthalmus_magnuspinnatus
ENSSMAG00000006869pabpc1b9870.223ENSPCIG00000016995-5570.223Phascolarctos_cinereus
ENSSMAG00000006869pabpc1b10087.231ENSPFOG00000010815pabpc1a10087.385Poecilia_formosa
ENSSMAG00000006869pabpc1b10094.164ENSPFOG00000005917pabpc1b10094.164Poecilia_formosa
ENSSMAG00000006869pabpc1b10094.479ENSPLAG00000001388pabpc1b10094.479Poecilia_latipinna
ENSSMAG00000006869pabpc1b10088.715ENSPLAG00000004114pabpc1a10088.871Poecilia_latipinna
ENSSMAG00000006869pabpc1b10094.164ENSPMEG00000014399pabpc1b10094.164Poecilia_mexicana
ENSSMAG00000006869pabpc1b10088.715ENSPMEG00000001334pabpc1a10088.871Poecilia_mexicana
ENSSMAG00000006869pabpc1b9988.315ENSPREG00000019595pabpc1a10088.315Poecilia_reticulata
ENSSMAG00000006869pabpc1b10094.479ENSPREG00000010911pabpc1b10094.479Poecilia_reticulata
ENSSMAG00000006869pabpc1b5979.082ENSPPYG00000020468-9879.082Pongo_abelii
ENSSMAG00000006869pabpc1b5979.082ENSPCAG00000005308-9879.082Procavia_capensis
ENSSMAG00000006869pabpc1b5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSSMAG00000006869pabpc1b5979.487ENSPVAG00000016117-9879.487Pteropus_vampyrus
ENSSMAG00000006869pabpc1b10094.795ENSPNYG00000012578pabpc1b10094.795Pundamilia_nyererei
ENSSMAG00000006869pabpc1b10089.028ENSPNYG00000005192pabpc1a10088.871Pundamilia_nyererei
ENSSMAG00000006869pabpc1b10093.701ENSPNAG00000024626pabpc1b10093.701Pygocentrus_nattereri
ENSSMAG00000006869pabpc1b10089.953ENSPNAG00000028408pabpc1a10089.623Pygocentrus_nattereri
ENSSMAG00000006869pabpc1b5879.082ENSRBIG00000027173-9879.082Rhinopithecus_bieti
ENSSMAG00000006869pabpc1b7983.740ENSRBIG00000028738-9588.525Rhinopithecus_bieti
ENSSMAG00000006869pabpc1b5879.082ENSRROG00000017404-9879.082Rhinopithecus_roxellana
ENSSMAG00000006869pabpc1b9862.862ENSSHAG00000000511-10062.862Sarcophilus_harrisii
ENSSMAG00000006869pabpc1b10093.375ENSSFOG00015002752-10093.375Scleropages_formosus
ENSSMAG00000006869pabpc1b10090.079ENSSFOG00015006662pabpc1a10090.079Scleropages_formosus
ENSSMAG00000006869pabpc1b7080.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSSMAG00000006869pabpc1b10094.006ENSSDUG00000011965pabpc1b10094.006Seriola_dumerili
ENSSMAG00000006869pabpc1b10089.028ENSSDUG00000006675pabpc1a10089.028Seriola_dumerili
ENSSMAG00000006869pabpc1b10089.028ENSSLDG00000011661pabpc1a10089.028Seriola_lalandi_dorsalis
ENSSMAG00000006869pabpc1b10095.775ENSSLDG00000014156pabpc1b10095.775Seriola_lalandi_dorsalis
ENSSMAG00000006869pabpc1b10096.530ENSSPAG00000019265pabpc1b10096.530Stegastes_partitus
ENSSMAG00000006869pabpc1b10088.715ENSSPAG00000014453-10088.871Stegastes_partitus
ENSSMAG00000006869pabpc1b5879.082ENSSSCG00000036336-9879.082Sus_scrofa
ENSSMAG00000006869pabpc1b5879.082ENSSSCG00000032167-9879.082Sus_scrofa
ENSSMAG00000006869pabpc1b10090.551ENSTRUG00000003767-10090.551Takifugu_rubripes
ENSSMAG00000006869pabpc1b10088.871ENSTRUG00000011577-10088.871Takifugu_rubripes
ENSSMAG00000006869pabpc1b10085.626ENSTNIG00000013307pabpc1a10085.626Tetraodon_nigroviridis
ENSSMAG00000006869pabpc1b10090.596ENSTNIG00000009153pabpc1b10090.596Tetraodon_nigroviridis
ENSSMAG00000006869pabpc1b5979.082ENSTTRG00000013181-9879.082Tursiops_truncatus
ENSSMAG00000006869pabpc1b5879.082ENSUAMG00000008089-9879.082Ursus_americanus
ENSSMAG00000006869pabpc1b9753.398ENSUMAG00000023926-8967.403Ursus_maritimus
ENSSMAG00000006869pabpc1b5879.082ENSUMAG00000003364-9879.082Ursus_maritimus
ENSSMAG00000006869pabpc1b5978.000ENSVVUG00000015892-9778.000Vulpes_vulpes
ENSSMAG00000006869pabpc1b9745.940ENSXETG00000015439-9745.727Xenopus_tropicalis
ENSSMAG00000006869pabpc1b10088.801ENSXCOG00000019901pabpc1b10088.486Xiphophorus_couchianus
ENSSMAG00000006869pabpc1b10085.647ENSXCOG00000017066pabpc1a10085.804Xiphophorus_couchianus
ENSSMAG00000006869pabpc1b10088.715ENSXMAG00000002555pabpc1a10088.871Xiphophorus_maculatus
ENSSMAG00000006869pabpc1b10094.322ENSXMAG00000003753pabpc1b10094.322Xiphophorus_maculatus

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