EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000006902 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4470 bases
Position: chr20:18315606-18320075
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011178	zf-C2H2	PF00096.26	2.5e-22	1	4
ENSSMAP00000011178	zf-C2H2	PF00096.26	2.5e-22	2	4
ENSSMAP00000011178	zf-C2H2	PF00096.26	2.5e-22	3	4
ENSSMAP00000011178	zf-C2H2	PF00096.26	2.5e-22	4	4
ENSSMAP00000011178	zf-met	PF12874.7	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000011325	-	3989	-	ENSSMAP00000011178	311 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000006902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000006902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000006902	-	56	46.721	ENSSMAG00000018844	prdm5	71	46.721
ENSSMAG00000006902	-	64	45.600	ENSSMAG00000019980	-	69	45.600
ENSSMAG00000006902	-	99	60.434	ENSSMAG00000017045	-	95	64.856
ENSSMAG00000006902	-	74	39.286	ENSSMAG00000008907	zbtb41	68	39.286
ENSSMAG00000006902	-	87	48.673	ENSSMAG00000015347	-	97	48.673
ENSSMAG00000006902	-	99	50.526	ENSSMAG00000009115	-	94	56.061
ENSSMAG00000006902	-	96	57.407	ENSSMAG00000009685	-	99	56.637
ENSSMAG00000006902	-	99	63.636	ENSSMAG00000006155	-	96	70.684
ENSSMAG00000006902	-	87	44.144	ENSSMAG00000015356	-	96	41.758
ENSSMAG00000006902	-	56	47.664	ENSSMAG00000005081	-	83	47.664
ENSSMAG00000006902	-	69	41.758	ENSSMAG00000019207	scrt1b	87	41.758
ENSSMAG00000006902	-	73	52.174	ENSSMAG00000014844	-	85	52.174
ENSSMAG00000006902	-	99	75.522	ENSSMAG00000006197	-	100	80.456
ENSSMAG00000006902	-	99	46.914	ENSSMAG00000014597	-	99	45.349
ENSSMAG00000006902	-	59	47.619	ENSSMAG00000007561	znf236	63	47.619
ENSSMAG00000006902	-	55	46.903	ENSSMAG00000013291	-	91	46.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000006902	-	99	46.591	ENSAPOG00000021966	-	99	46.591	Acanthochromis_polyacanthus
ENSSMAG00000006902	-	88	37.113	ENSAOCG00000020652	-	100	37.113	Amphiprion_ocellaris
ENSSMAG00000006902	-	99	47.778	ENSAOCG00000022529	-	100	47.778	Amphiprion_ocellaris
ENSSMAG00000006902	-	76	50.769	ENSAPEG00000006572	-	77	50.769	Amphiprion_percula
ENSSMAG00000006902	-	80	37.979	ENSAPEG00000009553	-	85	37.979	Amphiprion_percula
ENSSMAG00000006902	-	99	30.435	ENSAPEG00000011156	-	84	30.435	Amphiprion_percula
ENSSMAG00000006902	-	60	48.696	ENSATEG00000014684	-	97	48.696	Anabas_testudineus
ENSSMAG00000006902	-	91	47.748	ENSATEG00000015238	-	81	47.748	Anabas_testudineus
ENSSMAG00000006902	-	77	42.391	ENSACLG00000019349	-	74	42.391	Astatotilapia_calliptera
ENSSMAG00000006902	-	76	50.000	ENSACLG00000006718	-	90	50.000	Astatotilapia_calliptera
ENSSMAG00000006902	-	57	45.614	ENSACLG00000001368	-	87	45.614	Astatotilapia_calliptera
ENSSMAG00000006902	-	76	50.000	ENSACLG00000020333	-	90	50.000	Astatotilapia_calliptera
ENSSMAG00000006902	-	99	47.727	ENSACLG00000008374	-	99	47.727	Astatotilapia_calliptera
ENSSMAG00000006902	-	80	33.585	ENSCSEG00000019848	-	83	33.585	Cynoglossus_semilaevis
ENSSMAG00000006902	-	75	38.750	ENSCVAG00000020968	-	87	38.750	Cyprinodon_variegatus
ENSSMAG00000006902	-	65	54.902	ENSCVAG00000010887	-	90	54.902	Cyprinodon_variegatus
ENSSMAG00000006902	-	91	31.699	ENSCVAG00000000161	-	98	31.699	Cyprinodon_variegatus
ENSSMAG00000006902	-	91	30.769	ENSFHEG00000003856	-	98	30.769	Fundulus_heteroclitus
ENSSMAG00000006902	-	99	44.048	ENSGAFG00000000549	-	98	44.048	Gambusia_affinis
ENSSMAG00000006902	-	99	47.727	ENSHBUG00000017924	-	99	47.727	Haplochromis_burtoni
ENSSMAG00000006902	-	76	46.491	ENSHBUG00000011944	-	81	46.491	Haplochromis_burtoni
ENSSMAG00000006902	-	99	45.652	ENSHCOG00000020309	-	99	45.652	Hippocampus_comes
ENSSMAG00000006902	-	99	50.000	ENSKMAG00000017903	-	98	50.000	Kryptolebias_marmoratus
ENSSMAG00000006902	-	99	42.105	ENSLBEG00000008850	-	99	42.105	Labrus_bergylta
ENSSMAG00000006902	-	57	50.575	ENSLBEG00000026457	-	96	50.575	Labrus_bergylta
ENSSMAG00000006902	-	57	44.828	ENSMZEG00005028563	-	81	44.828	Maylandia_zebra
ENSSMAG00000006902	-	87	46.491	ENSMZEG00005025965	-	92	46.491	Maylandia_zebra
ENSSMAG00000006902	-	99	47.727	ENSMZEG00005011431	-	99	47.727	Maylandia_zebra
ENSSMAG00000006902	-	75	47.321	ENSMZEG00005011812	-	82	47.321	Maylandia_zebra
ENSSMAG00000006902	-	98	47.727	ENSMALG00000005696	-	99	47.727	Monopterus_albus
ENSSMAG00000006902	-	99	30.938	ENSMALG00000012840	-	96	30.938	Monopterus_albus
ENSSMAG00000006902	-	99	46.591	ENSNBRG00000004792	-	99	46.591	Neolamprologus_brichardi
ENSSMAG00000006902	-	57	44.545	ENSNBRG00000004723	-	83	44.545	Neolamprologus_brichardi
ENSSMAG00000006902	-	57	47.253	ENSONIG00000020667	-	97	47.253	Oreochromis_niloticus
ENSSMAG00000006902	-	79	46.250	ENSORLG00000012581	-	83	46.250	Oryzias_latipes
ENSSMAG00000006902	-	99	45.283	ENSPMGG00000001672	-	93	45.283	Periophthalmus_magnuspinnatus
ENSSMAG00000006902	-	99	34.870	ENSPMGG00000011591	-	99	44.318	Periophthalmus_magnuspinnatus
ENSSMAG00000006902	-	80	51.327	ENSPFOG00000018771	-	92	51.327	Poecilia_formosa
ENSSMAG00000006902	-	72	44.554	ENSPLAG00000005106	-	90	44.554	Poecilia_latipinna
ENSSMAG00000006902	-	80	51.327	ENSPMEG00000022651	-	96	51.327	Poecilia_mexicana
ENSSMAG00000006902	-	99	45.238	ENSPMEG00000004752	-	98	45.238	Poecilia_mexicana
ENSSMAG00000006902	-	72	55.446	ENSPMEG00000020864	-	96	55.446	Poecilia_mexicana
ENSSMAG00000006902	-	99	47.727	ENSPNYG00000016157	-	99	47.727	Pundamilia_nyererei
ENSSMAG00000006902	-	99	30.091	ENSPNAG00000011705	-	91	30.091	Pygocentrus_nattereri
ENSSMAG00000006902	-	99	46.591	ENSSDUG00000022035	-	99	46.591	Seriola_dumerili
ENSSMAG00000006902	-	99	46.591	ENSSLDG00000025676	-	99	46.591	Seriola_lalandi_dorsalis
ENSSMAG00000006902	-	99	50.943	ENSTRUG00000024009	-	100	50.943	Takifugu_rubripes
ENSSMAG00000006902	-	71	46.491	ENSTRUG00000023491	-	96	46.491	Takifugu_rubripes
ENSSMAG00000006902	-	98	42.857	ENSTRUG00000023354	-	98	42.857	Takifugu_rubripes
ENSSMAG00000006902	-	99	41.667	ENSTRUG00000021167	-	99	31.922	Takifugu_rubripes
ENSSMAG00000006902	-	79	36.800	ENSXMAG00000025174	-	85	38.938	Xiphophorus_maculatus
ENSSMAG00000006902	-	81	51.327	ENSXMAG00000024973	-	99	51.327	Xiphophorus_maculatus
ENSSMAG00000006902	-	66	43.966	ENSXMAG00000022894	-	67	43.966	Xiphophorus_maculatus
ENSSMAG00000006902	-	99	44.048	ENSXMAG00000028660	-	98	44.048	Xiphophorus_maculatus